Cow genome map


           Conread name:
           rjca18c_c23.y1
        

               Conread position:
               334-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               65, 82
               

               Conread position:
               335-504
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               335-577
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               335-583
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 119
               

               Conread position:
               335-583
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               64, 49
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 117
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               64, 53
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               338-533
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               339-583
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               340-575
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               340-582
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 170
               

               Conread position:
               340-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 85
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               341-534
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               58, 168
               

               Conread position:
               341-569
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               58, 118
               

               Conread position:
               341-572
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               341-578
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               341-584
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 200
               

               Conread position:
               341-584
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               341-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               58, 121
               

               Conread position:
               341-584
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               58, 77
               

               Conread position:
               342-584
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 80
               

               Conread position:
               344-582
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               55, 75
               

               Conread position:
               356-573
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               362-504
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               369-584
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               5, 40
               

               Conread position:
               371-584
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               378-581
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               382-582
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               387-558
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               389-569
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               389-584
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               396-584
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               410-584
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               412-584
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               39, 144
               

               Conread position:
               460-584
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               463-584
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 93
               
Show alignments to all cow chromosomes.