Cow genome map


           Conread name:
           rlin01_c13r1.y1
        

               Conread position:
               1-102
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               1-175
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               102, 162
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 151
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               88, 134
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               102, 163
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 168
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 168
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 10
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 172
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 174
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 168
               

               Conread position:
               2-105
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               3-160
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               3-181
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               3-190
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               95, 161
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 156
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               77, 159
               

               Conread position:
               3-233
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 201
               

               Conread position:
               3-243
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 157
               

               Conread position:
               3-248
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 160
               

               Conread position:
               3-254
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 163
               

               Conread position:
               3-254
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               3-272
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               88, 67
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 164
               

               Conread position:
               3-284
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               101, 162
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 167
               

               Conread position:
               3-289
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 166
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               9, 199
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 159
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               58, 85
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 65
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               43, 169
               

               Conread position:
               3-298
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 163
               

               Conread position:
               3-299
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               4-206
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               61, 170
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               5-198
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 166
               

               Conread position:
               5-202
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 164
               

               Conread position:
               5-202
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 183
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 163
               

               Conread position:
               10-291
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               14-223
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               15-266
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 210
               

               Conread position:
               15-266
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               16-201
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 148
               

               Conread position:
               18-243
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               18-291
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 145
               

               Conread position:
               323-496
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               80, 26
               
Show alignments to all cow chromosomes.