Cow genome map


           Conread name:
           rlin01_c13r1.y1
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               102, 167
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               102, 168
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 171
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               88, 163
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               99, 168
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 172
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               88, 52
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 171
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 172
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 179
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               99, 164
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               97, 76
               

               Conread position:
               2-102
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               3-100
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-151
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               52, 102
               

               Conread position:
               3-156
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               101, 50
               

               Conread position:
               3-158
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               3-174
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 170
               

               Conread position:
               3-174
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               3-192
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 129
               

               Conread position:
               3-196
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               101, 153
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               3-204
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 164
               

               Conread position:
               3-235
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 160
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 164
               

               Conread position:
               3-257
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               3-271
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               86, 165
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 52
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 52
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               154, 101
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               3-289
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 170
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 162
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 163
               

               Conread position:
               4-250
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               50, 158
               

               Conread position:
               4-294
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               60, 168
               

               Conread position:
               5-134
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               5-162
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               5-167
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 159
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               5-294
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 160
               

               Conread position:
               5-294
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 165
               

               Conread position:
               5-307
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               6-287
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 162
               

               Conread position:
               8-201
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 161
               

               Conread position:
               12-245
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 77
               

               Conread position:
               15-158
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               15-286
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               88, 136
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               16-197
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 148
               

               Conread position:
               16-230
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               71, 149
               

               Conread position:
               16-291
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               20-198
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 148
               
Show alignments to all cow chromosomes.