Cow genome map
Conread name: | rlin01_c13r1.y1 |
Conread position: | 1-159 |
Cow position: | chr11:82940695-82940860 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 129 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 58, 35 |
Conread position: | 1-160 |
Cow position: | chr11:2917659-2917823 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 131 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-160 |
Cow position: | chr11:47899206-47899033 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 137 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 1-208 |
Cow position: | chr11:19508222-19508011 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 171 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 102, 167 |
Conread position: | 1-208 |
Cow position: | chr11:25165369-25165160 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 167 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 102, 168 |
Conread position: | 1-208 |
Cow position: | chr11:46580282-46580081 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 163 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-208 |
Cow position: | chr11:50778300-50778084 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 169 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 99, 171 |
Conread position: | 1-223 |
Cow position: | chr11:41983526-41983746 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 161 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 88, 163 |
Conread position: | 1-258 |
Cow position: | chr11:59155952-59156210 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 196 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-266 |
Cow position: | chr11:955292-955021 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 1-285 |
Cow position: | chr11:35881837-35881544 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 209 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 99, 168 |
Conread position: | 1-285 |
Cow position: | chr11:52297294-52297582 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 172 |
Conread position: | 1-286 |
Cow position: | chr11:62490359-62490071 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 218 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 88, 52 |
Conread position: | 1-287 |
Cow position: | chr11:16251320-16251618 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 171 |
Conread position: | 1-287 |
Cow position: | chr11:40818711-40819009 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-287 |
Cow position: | chr11:44636831-44637125 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 172 |
Conread position: | 1-291 |
Cow position: | chr11:27248419-27248124 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 179 |
Conread position: | 1-291 |
Cow position: | chr11:42793046-42793328 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 227 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 99, 164 |
Conread position: | 1-291 |
Cow position: | chr11:65430986-65430707 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 227 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 97, 76 |
Conread position: | 2-102 |
Cow position: | chr11:47850953-47850852 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 2-287 |
Cow position: | chr11:80923398-80923700 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 217 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 25, 35 |
Conread position: | 3-100 |
Cow position: | chr11:65607766-65607863 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 81 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 3-151 |
Cow position: | chr11:30954924-30954773 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 52, 102 |
Conread position: | 3-156 |
Cow position: | chr11:36658896-36659052 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 101, 50 |
Conread position: | 3-158 |
Cow position: | chr11:13043221-13043383 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 62, 27 |
Conread position: | 3-174 |
Cow position: | chr11:3726213-3726029 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 57, 170 |
Conread position: | 3-174 |
Cow position: | chr11:63516751-63516566 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 140 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 3-192 |
Cow position: | chr11:45898128-45898325 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 151 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 101, 129 |
Conread position: | 3-196 |
Cow position: | chr11:8105707-8105509 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 56, 167 |
Conread position: | 3-198 |
Cow position: | chr11:62016351-62016545 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 143 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 101, 153 |
Conread position: | 3-201 |
Cow position: | chr11:75748358-75748157 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 56, 38 |
Conread position: | 3-204 |
Cow position: | chr11:65826817-65827013 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 153 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 99, 67 |
Conread position: | 3-206 |
Cow position: | chr11:48932660-48932866 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 165 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 23, 33 |
Conread position: | 3-208 |
Cow position: | chr11:1668601-1668389 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 158 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 35, 47 |
Conread position: | 3-208 |
Cow position: | chr11:21844208-21844418 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 98, 164 |
Conread position: | 3-235 |
Cow position: | chr11:18572726-18572494 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 169 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 84, 160 |
Conread position: | 3-236 |
Cow position: | chr11:9837175-9837414 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 180 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 56, 164 |
Conread position: | 3-257 |
Cow position: | chr11:43914136-43913888 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 11 |
Conread position: | 3-271 |
Cow position: | chr11:47165215-47165482 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 208 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 86, 165 |
Conread position: | 3-283 |
Cow position: | chr11:63847773-63847493 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 207 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 84, 52 |
Conread position: | 3-283 |
Cow position: | chr11:85764863-85764599 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 200 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 71, 52 |
Conread position: | 3-287 |
Cow position: | chr11:44642362-44642645 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 33 |
Conread position: | 3-287 |
Cow position: | chr11:64044166-64043885 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 187 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 154, 101 |
Conread position: | 3-287 |
Cow position: | chr11:79019598-79019897 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 219 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 27, 35 |
Conread position: | 3-289 |
Cow position: | chr11:33349771-33350068 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 170 |
Conread position: | 3-294 |
Cow position: | chr11:77705680-77705393 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 56 |
Conread position: | 3-294 |
Cow position: | chr11:77750847-77751137 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 162 |
Conread position: | 3-328 |
Cow position: | chr11:26483639-26483319 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 163 |
Conread position: | 4-250 |
Cow position: | chr11:70609710-70609464 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 184 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 23, 32 |
Conread position: | 4-273 |
Cow position: | chr11:81614713-81614979 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 203 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 50, 158 |
Conread position: | 4-294 |
Cow position: | chr11:21894228-21894521 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 224 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 60, 168 |
Conread position: | 5-134 |
Cow position: | chr11:65762677-65762814 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 113 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 5-162 |
Cow position: | chr11:4663123-4663285 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 119 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 5-167 |
Cow position: | chr11:62155549-62155376 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 134 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 5-287 |
Cow position: | chr11:41577091-41577369 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 159 |
Conread position: | 5-291 |
Cow position: | chr11:77745333-77745632 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 76 |
Conread position: | 5-294 |
Cow position: | chr11:17889800-17890093 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 228 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 54, 160 |
Conread position: | 5-294 |
Cow position: | chr11:76114577-76114281 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 165 |
Conread position: | 5-307 |
Cow position: | chr11:64932377-64932682 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 228 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 22, 32 |
Conread position: | 6-287 |
Cow position: | chr11:47586426-47586711 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 162 |
Conread position: | 8-201 |
Cow position: | chr11:45646675-45646869 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 98, 161 |
Conread position: | 12-245 |
Cow position: | chr11:68909934-68910175 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 189 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 47, 77 |
Conread position: | 15-158 |
Cow position: | chr11:26144183-26144326 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 44, 89 |
Conread position: | 15-286 |
Cow position: | chr11:35874079-35874337 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 212 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 88, 136 |
Conread position: | 15-287 |
Cow position: | chr11:62225899-62225615 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 207 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 15, 22 |
Conread position: | 16-197 |
Cow position: | chr11:17227734-17227914 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 91, 148 |
Conread position: | 16-230 |
Cow position: | chr11:36182598-36182381 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 175 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 71, 149 |
Conread position: | 16-291 |
Cow position: | chr11:3833441-3833716 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 52 |
Conread position: | 18-234 |
Cow position: | chr11:7315215-7315436 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 171 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 42, 151 |
Conread position: | 20-198 |
Cow position: | chr11:75355518-75355334 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 77, 148 |
Show alignments to all cow chromosomes.