Cow genome map


           Conread name:
           rlin01_c13r1.y1
        

               Conread position:
               1-102
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-105
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               88, 163
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 174
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               2-167
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 84
               

               Conread position:
               2-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               2-294
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               102, 259
               

               Conread position:
               3-159
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 91
               

               Conread position:
               3-197
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               79, 170
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 81
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 123
               

               Conread position:
               3-202
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 170
               

               Conread position:
               3-202
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               88, 11
               

               Conread position:
               3-202
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               3-214
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               3-240
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               101, 118
               

               Conread position:
               3-246
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               86, 171
               

               Conread position:
               3-278
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               55, 167
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               98, 286
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               105, 83
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 154
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 161
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 168
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               5-175
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 167
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 162
               

               Conread position:
               7-287
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               8-205
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               15-285
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               16-201
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               85, 150
               
Show alignments to all cow chromosomes.