Cow genome map
Conread name: | rlin01_c13r1.y1 |
Conread position: | 1-102 |
Cow position: | chr13:8374731-8374630 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 87 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-174 |
Cow position: | chr13:36877113-36877295 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 130 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 103, 168 |
Conread position: | 1-179 |
Cow position: | chr13:18172379-18172571 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 146 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-223 |
Cow position: | chr13:55295582-55295359 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 182 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 92, 166 |
Conread position: | 1-285 |
Cow position: | chr13:18835233-18835515 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 159 |
Conread position: | 1-287 |
Cow position: | chr13:41253663-41253956 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 206 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 88, 143 |
Conread position: | 1-287 |
Cow position: | chr13:52922133-52922433 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 215 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 102, 163 |
Conread position: | 1-291 |
Cow position: | chr13:971852-971561 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 163 |
Conread position: | 1-291 |
Cow position: | chr13:22085703-22085425 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 158 |
Conread position: | 1-291 |
Cow position: | chr13:34263328-34263047 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-291 |
Cow position: | chr13:34281717-34282015 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 172 |
Conread position: | 1-291 |
Cow position: | chr13:45023171-45022850 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-306 |
Cow position: | chr13:890129-889833 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 13 |
Conread position: | 2-170 |
Cow position: | chr13:17439728-17439545 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 2-286 |
Cow position: | chr13:20684079-20683793 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 35 |
Conread position: | 2-287 |
Cow position: | chr13:3701480-3701763 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 76 |
Conread position: | 2-291 |
Cow position: | chr13:41806817-41807101 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 227 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 99, 145 |
Conread position: | 3-138 |
Cow position: | chr13:22025666-22025521 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 3-150 |
Cow position: | chr13:24230252-24230413 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 3-154 |
Cow position: | chr13:9593551-9593711 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 3-160 |
Cow position: | chr13:20536543-20536710 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 3-193 |
Cow position: | chr13:43184829-43184635 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 151 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 101, 73 |
Conread position: | 3-200 |
Cow position: | chr13:22115749-22115947 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 150 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 60, 164 |
Conread position: | 3-208 |
Cow position: | chr13:48251943-48251740 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 162 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 3-248 |
Cow position: | chr13:38484874-38485119 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 195 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 52, 162 |
Conread position: | 3-248 |
Cow position: | chr13:51821847-51821596 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 191 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 98, 71 |
Conread position: | 3-257 |
Cow position: | chr13:45353086-45353343 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 56, 169 |
Conread position: | 3-274 |
Cow position: | chr13:20649941-20649664 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 56, 167 |
Conread position: | 3-274 |
Cow position: | chr13:26480170-26479899 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 205 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 36, 46 |
Conread position: | 3-291 |
Cow position: | chr13:311473-311767 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 161 |
Conread position: | 3-291 |
Cow position: | chr13:2414071-2414359 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 215 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 56, 161 |
Conread position: | 3-291 |
Cow position: | chr13:21176279-21175988 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 221 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 3-291 |
Cow position: | chr13:30651220-30651510 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 55 |
Conread position: | 3-291 |
Cow position: | chr13:37517094-37516802 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 167 |
Conread position: | 3-291 |
Cow position: | chr13:43762213-43762506 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 13 |
Conread position: | 3-291 |
Cow position: | chr13:54237397-54237672 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 212 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 79, 55 |
Conread position: | 3-298 |
Cow position: | chr13:19178317-19178614 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 163 |
Conread position: | 3-298 |
Cow position: | chr13:25531745-25531449 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 163 |
Conread position: | 5-160 |
Cow position: | chr13:21904708-21904872 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 5-174 |
Cow position: | chr13:48944715-48944884 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 60, 84 |
Conread position: | 5-214 |
Cow position: | chr13:54381892-54381677 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 57, 167 |
Conread position: | 5-290 |
Cow position: | chr13:60430030-60429747 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 161 |
Conread position: | 5-291 |
Cow position: | chr13:51940781-51941064 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 159 |
Conread position: | 11-291 |
Cow position: | chr13:20863963-20863683 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 220 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 20, 26 |
Conread position: | 12-204 |
Cow position: | chr13:17970976-17970787 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 153 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 92, 151 |
Conread position: | 15-204 |
Cow position: | chr13:53574025-53574205 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 137 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 81, 90 |
Conread position: | 15-287 |
Cow position: | chr13:11820649-11820908 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 15-290 |
Cow position: | chr13:6616697-6616414 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 35 |
Conread position: | 15-310 |
Cow position: | chr13:6189561-6189277 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 22 |
Show alignments to all cow chromosomes.