Cow genome map
| Conread name: | rlin01_c13r1.y1 |
| Conread position: | 1-98 |
| Cow position: | chr14:15492694-15492791 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-100 |
| Cow position: | chr14:24608064-24608163 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-200 |
| Cow position: | chr14:16834423-16834632 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 174 |
| Conread position: | 1-208 |
| Cow position: | chr14:41127992-41128200 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 1-287 |
| Cow position: | chr14:33462257-33462544 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 1-291 |
| Cow position: | chr14:27591856-27591556 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 1-294 |
| Cow position: | chr14:20640529-20640225 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 172 |
| Conread position: | 1-294 |
| Cow position: | chr14:43046246-43046537 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 88, 82 |
| Conread position: | 2-206 |
| Cow position: | chr14:10078368-10078565 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 56 |
| Conread position: | 3-169 |
| Cow position: | chr14:15913448-15913273 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-173 |
| Cow position: | chr14:19129609-19129791 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 169 |
| Conread position: | 3-175 |
| Cow position: | chr14:50589284-50589108 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 166 |
| Conread position: | 3-198 |
| Cow position: | chr14:19624185-19624390 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 172 |
| Conread position: | 3-202 |
| Cow position: | chr14:25231545-25231345 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 160 |
| Conread position: | 3-205 |
| Cow position: | chr14:14466377-14466172 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 3-227 |
| Cow position: | chr14:11641470-11641247 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 3-284 |
| Cow position: | chr14:33828260-33828530 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 127 |
| Conread position: | 3-285 |
| Cow position: | chr14:13810037-13810344 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 3-287 |
| Cow position: | chr14:27312526-27312827 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 3-287 |
| Cow position: | chr14:45605191-45605478 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 163 |
| Conread position: | 3-289 |
| Cow position: | chr14:8754428-8754714 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 165 |
| Conread position: | 3-289 |
| Cow position: | chr14:33538823-33538538 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 164 |
| Conread position: | 3-290 |
| Cow position: | chr14:24581025-24581330 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 3-291 |
| Cow position: | chr14:19221981-19222274 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 141 |
| Conread position: | 3-291 |
| Cow position: | chr14:24991922-24992205 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 3-291 |
| Cow position: | chr14:41325337-41325046 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 3-306 |
| Cow position: | chr14:38921049-38921341 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 5-282 |
| Cow position: | chr14:48492688-48492401 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 55, 169 |
| Conread position: | 5-291 |
| Cow position: | chr14:6490605-6490309 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 168 |
| Conread position: | 5-291 |
| Cow position: | chr14:6599851-6599560 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 164 |
| Conread position: | 5-291 |
| Cow position: | chr14:9020129-9020415 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 12-208 |
| Cow position: | chr14:15032870-15033066 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 152 |
Show alignments to all cow chromosomes.