Cow genome map


           Conread name:
           rlin01_c13r1.y1
        

               Conread position:
               1-139
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 85
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 167
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 156
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 164
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 172
               

               Conread position:
               2-200
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 35
               

               Conread position:
               3-97
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-102
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-105
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-160
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               3-166
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 164
               

               Conread position:
               3-167
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               3-196
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               99, 138
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 167
               

               Conread position:
               3-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               106, 159
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 261
               

               Conread position:
               3-281
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               56, 170
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               177, 8
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 160
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 159
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 165
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 121
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 115
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 158
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 159
               

               Conread position:
               4-197
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               59, 163
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               5-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               88, 156
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               97, 156
               

               Conread position:
               7-287
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 162
               

               Conread position:
               12-259
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 154
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 93
               

               Conread position:
               15-288
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 149
               

               Conread position:
               18-174
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 71
               
Show alignments to all cow chromosomes.