Cow genome map
Conread name: | rlin01_c13r1.y1 |
Conread position: | 1-102 |
Cow position: | chr2:1638547-1638446 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-138 |
Cow position: | chr2:29907252-29907393 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 29, 36 |
Conread position: | 1-167 |
Cow position: | chr2:45535409-45535237 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 137 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 97, 48 |
Conread position: | 1-197 |
Cow position: | chr2:68190696-68190891 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 149 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 88, 164 |
Conread position: | 1-198 |
Cow position: | chr2:80797614-80797419 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 156 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 94, 13 |
Conread position: | 1-199 |
Cow position: | chr2:11617042-11616842 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 58, 132 |
Conread position: | 1-199 |
Cow position: | chr2:63568311-63568115 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 144 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 77, 163 |
Conread position: | 1-200 |
Cow position: | chr2:46994810-46995010 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 164 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 100, 168 |
Conread position: | 1-248 |
Cow position: | chr2:74260401-74260153 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 196 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 102, 166 |
Conread position: | 1-263 |
Cow position: | chr2:46202216-46201951 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 171 |
Conread position: | 1-264 |
Cow position: | chr2:21284879-21284617 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 163 |
Conread position: | 1-280 |
Cow position: | chr2:39068251-39067949 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 221 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 88, 300 |
Conread position: | 1-282 |
Cow position: | chr2:46189153-46189456 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 227 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-285 |
Cow position: | chr2:56828623-56828911 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 165 |
Conread position: | 1-287 |
Cow position: | chr2:18997670-18997393 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-290 |
Cow position: | chr2:46294093-46294382 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 57 |
Conread position: | 1-291 |
Cow position: | chr2:549383-549668 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 115 |
Conread position: | 1-291 |
Cow position: | chr2:38628852-38628567 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-291 |
Cow position: | chr2:41452179-41451879 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-291 |
Cow position: | chr2:45912689-45912984 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 182 |
Conread position: | 1-291 |
Cow position: | chr2:47115974-47116254 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 218 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 103, 49 |
Conread position: | 1-291 |
Cow position: | chr2:48069453-48069749 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 168 |
Conread position: | 1-291 |
Cow position: | chr2:80324908-80325196 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 164 |
Conread position: | 2-245 |
Cow position: | chr2:4254590-4254839 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 198 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 29, 35 |
Conread position: | 2-291 |
Cow position: | chr2:31783881-31783595 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 35 |
Conread position: | 3-149 |
Cow position: | chr2:19294535-19294388 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 88, 55 |
Conread position: | 3-162 |
Cow position: | chr2:15597531-15597696 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 99, 56 |
Conread position: | 3-164 |
Cow position: | chr2:28318910-28319080 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 3-165 |
Cow position: | chr2:46353551-46353713 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 118 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 99, 114 |
Conread position: | 3-167 |
Cow position: | chr2:28257407-28257241 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 130 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 101 |
Conread position: | 3-171 |
Cow position: | chr2:60462877-60463052 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 3-171 |
Cow position: | chr2:60468256-60468431 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 3-172 |
Cow position: | chr2:6697552-6697731 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 88, 63 |
Conread position: | 3-174 |
Cow position: | chr2:69770446-69770265 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 3-176 |
Cow position: | chr2:80963703-80963885 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 146 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 3-196 |
Cow position: | chr2:47990379-47990186 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 143 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 63, 163 |
Conread position: | 3-198 |
Cow position: | chr2:34535213-34535421 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 55, 74 |
Conread position: | 3-199 |
Cow position: | chr2:14555807-14556008 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 149 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 82, 164 |
Conread position: | 3-206 |
Cow position: | chr2:14349729-14349531 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 159 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 185, 84 |
Conread position: | 3-206 |
Cow position: | chr2:51594707-51594501 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 158 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 84, 165 |
Conread position: | 3-221 |
Cow position: | chr2:42608009-42607792 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 97, 137 |
Conread position: | 3-228 |
Cow position: | chr2:41185415-41185185 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 177 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 65, 8 |
Conread position: | 3-237 |
Cow position: | chr2:45554258-45554020 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 101, 166 |
Conread position: | 3-254 |
Cow position: | chr2:33497254-33497516 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 199 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 57, 173 |
Conread position: | 3-270 |
Cow position: | chr2:45439384-45439130 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 195 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 3-279 |
Cow position: | chr2:6884167-6883890 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 210 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 62, 152 |
Conread position: | 3-283 |
Cow position: | chr2:1210822-1211109 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 213 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 57, 169 |
Conread position: | 3-285 |
Cow position: | chr2:10867954-10868248 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 205 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 86, 56 |
Conread position: | 3-285 |
Cow position: | chr2:16514728-16514446 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 162 |
Conread position: | 3-286 |
Cow position: | chr2:18858202-18858480 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 45 |
Conread position: | 3-286 |
Cow position: | chr2:19212109-19212387 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 158 |
Conread position: | 3-287 |
Cow position: | chr2:24593814-24593547 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 204 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 3-287 |
Cow position: | chr2:38273488-38273195 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 215 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 62, 168 |
Conread position: | 3-289 |
Cow position: | chr2:6038951-6038661 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 219 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 24, 33 |
Conread position: | 3-291 |
Cow position: | chr2:15298481-15298192 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 87 |
Conread position: | 3-291 |
Cow position: | chr2:32408547-32408861 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 228 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 3-291 |
Cow position: | chr2:44081378-44081100 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 3-291 |
Cow position: | chr2:45259140-45259425 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 14 |
Conread position: | 3-291 |
Cow position: | chr2:45623960-45623677 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 112 |
Conread position: | 3-291 |
Cow position: | chr2:65269747-65270043 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 174 |
Conread position: | 3-291 |
Cow position: | chr2:76110340-76110036 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 223 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 62, 168 |
Conread position: | 3-294 |
Cow position: | chr2:14884227-14883931 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 3-294 |
Cow position: | chr2:29269002-29268712 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 84 |
Conread position: | 3-294 |
Cow position: | chr2:32446391-32446676 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 204 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 191, 57 |
Conread position: | 3-294 |
Cow position: | chr2:51824867-51824588 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 86, 163 |
Conread position: | 5-102 |
Cow position: | chr2:38785663-38785759 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 82 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 5-174 |
Cow position: | chr2:62644530-62644362 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 124 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 60, 92 |
Conread position: | 5-204 |
Cow position: | chr2:2689108-2688911 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 83, 159 |
Conread position: | 5-208 |
Cow position: | chr2:4273328-4273536 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 146 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 81, 160 |
Conread position: | 5-220 |
Cow position: | chr2:485560-485343 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 60, 165 |
Conread position: | 5-221 |
Cow position: | chr2:53430669-53430452 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 176 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 21, 31 |
Conread position: | 5-234 |
Cow position: | chr2:32489468-32489690 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 59, 83 |
Conread position: | 5-291 |
Cow position: | chr2:36105208-36104907 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 215 |
Conread position: | 5-291 |
Cow position: | chr2:57776295-57776000 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 175 |
Conread position: | 5-291 |
Cow position: | chr2:76340715-76341015 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 162 |
Conread position: | 6-289 |
Cow position: | chr2:39384931-39385209 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 31 |
Conread position: | 7-228 |
Cow position: | chr2:6952135-6951924 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 171 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 7-291 |
Cow position: | chr2:45575055-45575345 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 30 |
Conread position: | 8-291 |
Cow position: | chr2:60956311-60956033 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 35, 49 |
Conread position: | 8-310 |
Cow position: | chr2:22372008-22372314 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 161 |
Conread position: | 11-283 |
Cow position: | chr2:1300453-1300721 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 193 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 114, 93 |
Conread position: | 12-280 |
Cow position: | chr2:20855893-20856161 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 153 |
Conread position: | 12-282 |
Cow position: | chr2:76969239-76969516 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 161 |
Conread position: | 15-145 |
Cow position: | chr2:58686868-58686734 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 15-267 |
Cow position: | chr2:37920851-37921103 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 196 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 65, 46 |
Conread position: | 15-270 |
Cow position: | chr2:1095830-1095578 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 190 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 88, 142 |
Conread position: | 18-287 |
Cow position: | chr2:37009344-37009073 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 148 |
Conread position: | 18-291 |
Cow position: | chr2:28711063-28711326 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 201 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 84, 58 |
Show alignments to all cow chromosomes.