Cow genome map

Conread name: rlin01_c13r1.y1

Conread position: 1-145
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 36

Conread position: 1-176
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 36

Conread position: 1-201
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 36

Conread position: 1-206
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 164

Conread position: 1-217
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 10, 38

Conread position: 1-284
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 36

Conread position: 1-287
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 36

Conread position: 1-294
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 1-299
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 30, 36

Conread position: 1-328
Cow position:
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 36

Conread position: 3-164
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 8

Conread position: 3-206
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 3-208
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 168

Conread position: 3-208
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 143

Conread position: 3-209
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 162

Conread position: 3-236
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 133

Conread position: 3-282
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 163

Conread position: 3-285
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 165

Conread position: 3-285
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 27

Conread position: 3-287
Cow position:
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 3-288
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 41

Conread position: 3-288
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 167

Conread position: 3-291
Cow position:
Alignm length: 303
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 41

Conread position: 3-291
Cow position:
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 85

Conread position: 3-291
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 113

Conread position: 3-294
Cow position:
Alignm length: 302
Alignm identity: 208
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 54, 129

Conread position: 3-296
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 155

Conread position: 5-284
Cow position:
Alignm length: 284
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 153

Conread position: 5-289
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 168

Conread position: 5-291
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 99, 168

Conread position: 5-291
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 55, 160

Conread position: 6-287
Cow position:
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 145

Conread position: 11-285
Cow position:
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 12-291
Cow position:
Alignm length: 285
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 152

Conread position: 15-158
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 16, 22

Conread position: 15-167
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 154

Conread position: 15-287
Cow position:
Alignm length: 284
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 15-291
Cow position:
Alignm length: 283
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 18-268
Cow position:
Alignm length: 255
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 209

Conread position: 18-291
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 86, 52

Show alignments to all cow chromosomes.