Cow genome map
| Conread name: | rlin01_c13r1.y1 |
| Conread position: | 1-102 |
| Cow position: | chr24:31359244-31359145 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-125 |
| Cow position: | chr24:17938681-17938562 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-200 |
| Cow position: | chr24:27941089-27941291 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 137 |
| Conread position: | 1-205 |
| Cow position: | chr24:27726095-27726292 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-258 |
| Cow position: | chr24:3430653-3430381 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 74 |
| Conread position: | 1-271 |
| Cow position: | chr24:15057321-15057037 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 3-160 |
| Cow position: | chr24:29389159-29388997 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 99, 92 |
| Conread position: | 3-162 |
| Cow position: | chr24:20943085-20942918 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 82, 130 |
| Conread position: | 3-201 |
| Cow position: | chr24:17294273-17294471 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 56, 162 |
| Conread position: | 3-225 |
| Cow position: | chr24:43683550-43683765 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 3-230 |
| Cow position: | chr24:42007658-42007433 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 61, 161 |
| Conread position: | 3-248 |
| Cow position: | chr24:38347603-38347348 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 57, 171 |
| Conread position: | 3-275 |
| Cow position: | chr24:29027962-29027694 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 101, 164 |
| Conread position: | 3-283 |
| Cow position: | chr24:20969881-20970158 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 159 |
| Conread position: | 3-287 |
| Cow position: | chr24:32054578-32054301 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 3-291 |
| Cow position: | chr24:27149314-27149033 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 98, 56 |
| Conread position: | 3-291 |
| Cow position: | chr24:28062870-28062572 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 98, 173 |
| Conread position: | 3-291 |
| Cow position: | chr24:33098567-33098861 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 3-294 |
| Cow position: | chr24:17104654-17104941 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 4-291 |
| Cow position: | chr24:40130044-40129738 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 226 |
| Conread position: | 5-291 |
| Cow position: | chr24:29673436-29673145 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 165 |
| Conread position: | 7-224 |
| Cow position: | chr24:31159531-31159319 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 15-280 |
| Cow position: | chr24:634891-634627 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 144 |
| Conread position: | 15-280 |
| Cow position: | chr24:24491104-24491373 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 85, 155 |
Show alignments to all cow chromosomes.