Cow genome map
| Conread name: | rlin01_c13r1.y1 |
| Conread position: | 1-165 |
| Cow position: | chr25:20785643-20785816 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 99, 69 |
| Conread position: | 1-191 |
| Cow position: | chr25:24669494-24669682 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-233 |
| Cow position: | chr25:14118035-14117815 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-242 |
| Cow position: | chr25:8347451-8347206 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 168 |
| Conread position: | 1-285 |
| Cow position: | chr25:8120724-8120431 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 169 |
| Conread position: | 1-287 |
| Cow position: | chr25:20076435-20076150 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 1-287 |
| Cow position: | chr25:26238813-26238521 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-291 |
| Cow position: | chr25:2136296-2136012 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 2-148 |
| Cow position: | chr25:12319406-12319553 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 3-112 |
| Cow position: | chr25:36017478-36017369 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-160 |
| Cow position: | chr25:6255995-6256165 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 3-162 |
| Cow position: | chr25:35333099-35332936 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 3-197 |
| Cow position: | chr25:16001584-16001779 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 95, 162 |
| Conread position: | 3-208 |
| Cow position: | chr25:38135687-38135478 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 101, 165 |
| Conread position: | 3-287 |
| Cow position: | chr25:13569230-13569515 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 131 |
| Conread position: | 3-291 |
| Cow position: | chr25:1838178-1837891 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 158 |
| Conread position: | 3-291 |
| Cow position: | chr25:12204410-12204117 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 160 |
| Conread position: | 3-291 |
| Cow position: | chr25:20060086-20060380 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 166 |
| Conread position: | 3-291 |
| Cow position: | chr25:26757377-26757079 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 4-287 |
| Cow position: | chr25:14833719-14834016 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 85, 257 |
| Conread position: | 4-291 |
| Cow position: | chr25:6464092-6464380 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 163 |
| Conread position: | 5-200 |
| Cow position: | chr25:17566526-17566326 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 165 |
| Conread position: | 5-208 |
| Cow position: | chr25:12081382-12081584 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 5-223 |
| Cow position: | chr25:20348800-20348574 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 55, 168 |
| Conread position: | 5-291 |
| Cow position: | chr25:12824081-12824381 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 15-291 |
| Cow position: | chr25:15319848-15319577 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 154 |
| Conread position: | 19-262 |
| Cow position: | chr25:17975443-17975690 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 18 |
Show alignments to all cow chromosomes.