Cow genome map
| Conread name: | rlin01_c13r1.y1 |
| Conread position: | 1-160 |
| Cow position: | chr29:22613369-22613205 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-194 |
| Cow position: | chr29:34773791-34773987 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 102, 188 |
| Conread position: | 1-200 |
| Cow position: | chr29:25092055-25091859 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 101, 116 |
| Conread position: | 1-229 |
| Cow position: | chr29:39111372-39111594 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 100, 126 |
| Conread position: | 1-230 |
| Cow position: | chr29:22162310-22162547 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 103, 165 |
| Conread position: | 1-285 |
| Cow position: | chr29:19125286-19125015 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 103 |
| Conread position: | 1-287 |
| Cow position: | chr29:44233007-44233296 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 1-293 |
| Cow position: | chr29:12798862-12798579 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 69 |
| Conread position: | 3-160 |
| Cow position: | chr29:4066027-4065861 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 100, 149 |
| Conread position: | 3-160 |
| Cow position: | chr29:19821228-19821070 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 3-179 |
| Cow position: | chr29:4520276-4520088 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 3-206 |
| Cow position: | chr29:94613-94811 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 3-208 |
| Cow position: | chr29:12784015-12784224 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 165 |
| Conread position: | 3-290 |
| Cow position: | chr29:19428600-19428323 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 56, 159 |
| Conread position: | 3-291 |
| Cow position: | chr29:32290549-32290251 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 3-294 |
| Cow position: | chr29:20673858-20674162 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 172 |
| Conread position: | 3-294 |
| Cow position: | chr29:31926348-31926644 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 141 |
| Conread position: | 3-308 |
| Cow position: | chr29:22175628-22175305 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 4-180 |
| Cow position: | chr29:26986872-26986698 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 132 |
| Conread position: | 4-287 |
| Cow position: | chr29:26981423-26981156 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 5-294 |
| Cow position: | chr29:26519522-26519813 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 56, 164 |
| Conread position: | 6-230 |
| Cow position: | chr29:6844689-6844919 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 6, 166 |
| Conread position: | 7-219 |
| Cow position: | chr29:17135783-17135572 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 155 |
| Conread position: | 15-229 |
| Cow position: | chr29:699687-699898 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 15-291 |
| Cow position: | chr29:2744343-2744623 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 15-294 |
| Cow position: | chr29:45005696-45005970 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 16-275 |
| Cow position: | chr29:10058608-10058862 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 12, 21 |
Show alignments to all cow chromosomes.