Cow genome map
Conread name: | rlin01_c13r1.y1 |
Conread position: | 1-145 |
Cow position: | chr4:38935293-38935141 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1-174 |
Cow position: | chr4:18576837-18577022 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 145 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 29, 36 |
Conread position: | 1-179 |
Cow position: | chr4:29291456-29291272 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 140 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 101, 165 |
Conread position: | 1-201 |
Cow position: | chr4:23847111-23847318 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 165 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-202 |
Cow position: | chr4:19744822-19744621 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 150 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 26, 36 |
Conread position: | 1-205 |
Cow position: | chr4:20299210-20298998 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 173 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 100, 69 |
Conread position: | 1-218 |
Cow position: | chr4:7571346-7571125 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 171 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 103, 60 |
Conread position: | 1-224 |
Cow position: | chr4:51728013-51727793 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 173 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-276 |
Cow position: | chr4:28399483-28399746 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 196 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-285 |
Cow position: | chr4:31136688-31136403 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 165 |
Conread position: | 1-286 |
Cow position: | chr4:20139580-20139880 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 232 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-287 |
Cow position: | chr4:47730792-47730518 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 31 |
Conread position: | 1-287 |
Cow position: | chr4:53999572-53999873 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-291 |
Cow position: | chr4:53208231-53207951 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 218 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 1-291 |
Cow position: | chr4:65919550-65919265 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 164 |
Conread position: | 1-293 |
Cow position: | chr4:27292019-27292318 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 171 |
Conread position: | 1-302 |
Cow position: | chr4:8947329-8947030 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 10 |
Conread position: | 2-133 |
Cow position: | chr4:34022651-34022787 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 110 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 29, 35 |
Conread position: | 2-286 |
Cow position: | chr4:61391268-61391551 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 207 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 101, 167 |
Conread position: | 2-287 |
Cow position: | chr4:53209175-53208886 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 220 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 57, 171 |
Conread position: | 2-291 |
Cow position: | chr4:3687859-3687568 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 162 |
Conread position: | 3-144 |
Cow position: | chr4:36724973-36724826 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 3-160 |
Cow position: | chr4:13871853-13871697 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 114 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 3-167 |
Cow position: | chr4:13256023-13255854 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 121 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 3-174 |
Cow position: | chr4:21232939-21233116 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 142 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 3-196 |
Cow position: | chr4:43909678-43909490 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 56, 79 |
Conread position: | 3-198 |
Cow position: | chr4:55395696-55395504 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 151 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 56, 159 |
Conread position: | 3-202 |
Cow position: | chr4:46597313-46597115 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 154 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 56, 162 |
Conread position: | 3-206 |
Cow position: | chr4:29237223-29237422 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 159 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 98, 129 |
Conread position: | 3-206 |
Cow position: | chr4:52748523-52748730 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 166 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 101, 166 |
Conread position: | 3-208 |
Cow position: | chr4:11021719-11021925 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 56, 162 |
Conread position: | 3-208 |
Cow position: | chr4:28772133-28772341 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 156 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 24, 34 |
Conread position: | 3-208 |
Cow position: | chr4:63349540-63349750 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 166 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 62, 143 |
Conread position: | 3-225 |
Cow position: | chr4:19582682-19582907 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 175 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 3-241 |
Cow position: | chr4:45662574-45662807 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 63 |
Conread position: | 3-254 |
Cow position: | chr4:37935349-37935601 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 197 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 28, 34 |
Conread position: | 3-268 |
Cow position: | chr4:68764456-68764183 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 192 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 62, 151 |
Conread position: | 3-277 |
Cow position: | chr4:49158849-49159110 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 202 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 73, 162 |
Conread position: | 3-282 |
Cow position: | chr4:52166918-52167213 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 209 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 82, 200 |
Conread position: | 3-285 |
Cow position: | chr4:11099734-11100015 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 215 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 99, 165 |
Conread position: | 3-287 |
Cow position: | chr4:41301055-41301353 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 64, 167 |
Conread position: | 3-291 |
Cow position: | chr4:11901626-11901917 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 165 |
Conread position: | 3-291 |
Cow position: | chr4:39009901-39009612 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 215 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 90, 167 |
Conread position: | 3-291 |
Cow position: | chr4:54501514-54501806 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 166 |
Conread position: | 3-291 |
Cow position: | chr4:67392894-67392604 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 99 |
Conread position: | 3-310 |
Cow position: | chr4:48137846-48137538 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 231 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 62, 168 |
Conread position: | 4-283 |
Cow position: | chr4:285583-285307 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 59, 149 |
Conread position: | 4-291 |
Cow position: | chr4:58248335-58248054 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 210 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 85, 56 |
Conread position: | 5-215 |
Cow position: | chr4:42266819-42267023 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 150 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 92, 82 |
Conread position: | 5-291 |
Cow position: | chr4:37619954-37620244 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 165 |
Conread position: | 8-156 |
Cow position: | chr4:44902366-44902215 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 120 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 8-178 |
Cow position: | chr4:56435738-56435555 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 134 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 8-254 |
Cow position: | chr4:19597386-19597634 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 193 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 93, 130 |
Conread position: | 12-291 |
Cow position: | chr4:49794598-49794325 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 211 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 47, 64 |
Conread position: | 15-291 |
Cow position: | chr4:30574374-30574099 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 146 |
Conread position: | 16-287 |
Cow position: | chr4:59871407-59871152 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 205 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 73, 140 |
Conread position: | 16-327 |
Cow position: | chr4:45589677-45589980 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 201 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 43, 56 |
Show alignments to all cow chromosomes.