Cow genome map


           Conread name:
           rlin01_c13r1.y1
        

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-174
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 165
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               100, 69
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 165
               

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 31
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 164
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 171
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               2-133
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 35
               

               Conread position:
               2-286
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 167
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               57, 171
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 162
               

               Conread position:
               3-144
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               3-160
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-167
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               3-174
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               3-196
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 79
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               3-202
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               56, 162
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               98, 129
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               101, 166
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 162
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 143
               

               Conread position:
               3-225
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               3-254
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               3-268
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 151
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               73, 162
               

               Conread position:
               3-282
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               82, 200
               

               Conread position:
               3-285
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               99, 165
               

               Conread position:
               3-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 167
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               90, 167
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 166
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 99
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               62, 168
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               92, 82
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 165
               

               Conread position:
               8-156
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               8-178
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               8-254
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               12-291
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               47, 64
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 146
               

               Conread position:
               16-287
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               73, 140
               

               Conread position:
               16-327
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               43, 56
               
Show alignments to all cow chromosomes.