Cow genome map

Conread name: rlin01_c13r1.y1

Conread position: 1-105
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 60

Conread position: 1-190
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 164

Conread position: 1-196
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 171

Conread position: 1-207
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 95, 0

Conread position: 1-224
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 157

Conread position: 1-243
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 175

Conread position: 1-267
Cow position:
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 163

Conread position: 1-270
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 164

Conread position: 1-275
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 58, 165

Conread position: 1-279
Cow position:
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 163

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 171

Conread position: 1-287
Cow position:
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 172

Conread position: 1-287
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 41

Conread position: 1-291
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 170

Conread position: 1-291
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 150

Conread position: 1-291
Cow position:
Alignm length: 300
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 161

Conread position: 1-291
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 232

Conread position: 1-291
Cow position:
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 186

Conread position: 1-291
Cow position:
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 231

Conread position: 2-202
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 150

Conread position: 2-208
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 35

Conread position: 3-196
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 175

Conread position: 3-198
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 76

Conread position: 3-200
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 56, 159

Conread position: 3-200
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 164

Conread position: 3-202
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 46

Conread position: 3-204
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 158

Conread position: 3-206
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 15

Conread position: 3-206
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 3-206
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 168

Conread position: 3-208
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 111, 101

Conread position: 3-236
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 62, 169

Conread position: 3-248
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 179

Conread position: 3-263
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 95, 166

Conread position: 3-275
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 56, 141

Conread position: 3-285
Cow position:
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 3-286
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 167

Conread position: 3-286
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 8

Conread position: 3-287
Cow position:
Alignm length: 296
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 34

Conread position: 3-287
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 165

Conread position: 3-290
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 149

Conread position: 3-291
Cow position:
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 3-291
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 85

Conread position: 3-291
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 163

Conread position: 3-291
Cow position:
Alignm length: 290
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 36

Conread position: 3-294
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 173

Conread position: 3-295
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 56, 166

Conread position: 4-287
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 64, 159

Conread position: 4-289
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 176

Conread position: 4-291
Cow position:
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 138

Conread position: 5-208
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 44

Conread position: 5-279
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 84, 165

Conread position: 5-291
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 76, 147

Conread position: 5-291
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 161

Conread position: 5-291
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 82, 162

Conread position: 5-294
Cow position:
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 161

Conread position: 7-160
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 9-291
Cow position:
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 155

Conread position: 15-291
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 22

Conread position: 15-291
Cow position:
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 159

Conread position: 15-291
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 88, 154

Conread position: 16-206
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.