Cow genome map


           Conread name:
           rlin01_c13r1.y1
        

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               97, 168
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 165
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 174
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 159
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 165
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               102, 167
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 170
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 164
               

               Conread position:
               3-102
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-102
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-196
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 81
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 150
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 143
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 160
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 72
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               86, 167
               

               Conread position:
               3-228
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               86, 160
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 121
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               87, 151
               

               Conread position:
               3-289
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 169
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               98, 163
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               57, 161
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               4-193
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 160
               

               Conread position:
               4-224
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 157
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 160
               

               Conread position:
               5-160
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               5-174
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 162
               

               Conread position:
               5-283
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               84, 157
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 162
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               222, 83
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 156
               

               Conread position:
               6-187
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 159
               

               Conread position:
               6-291
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 169
               

               Conread position:
               8-294
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 74
               

               Conread position:
               15-208
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 152
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               15-294
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               74, 40
               
Show alignments to all cow chromosomes.