Cow genome map

Conread name: rlin01_c13r1.y1

Conread position: 1-151
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 1-165
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 36

Conread position: 1-169
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 38

Conread position: 1-170
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 36

Conread position: 1-196
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 36

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 1-208
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 106, 163

Conread position: 1-222
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 176

Conread position: 1-235
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 87, 165

Conread position: 1-284
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 160

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 172

Conread position: 1-287
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 36

Conread position: 1-287
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 30

Conread position: 1-290
Cow position:
Alignm length: 301
Alignm identity: 223
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 30, 36

Conread position: 1-291
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 169

Conread position: 1-291
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 160

Conread position: 1-295
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 2-102
Cow position:
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-206
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 102, 163

Conread position: 2-206
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 104, 29

Conread position: 2-291
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 162

Conread position: 3-129
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 3-160
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 34

Conread position: 3-160
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 3-174
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 8

Conread position: 3-174
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 162

Conread position: 3-176
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 3-186
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 161

Conread position: 3-202
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 164

Conread position: 3-221
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 73, 139

Conread position: 3-285
Cow position:
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 52

Conread position: 3-287
Cow position:
Alignm length: 300
Alignm identity: 219
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 100, 168

Conread position: 3-290
Cow position:
Alignm length: 298
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 166

Conread position: 3-291
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 164

Conread position: 3-291
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 3-291
Cow position:
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 65

Conread position: 3-291
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 52, 172

Conread position: 3-291
Cow position:
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 161

Conread position: 3-291
Cow position:
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 164

Conread position: 3-291
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 99, 50

Conread position: 3-291
Cow position:
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 92

Conread position: 3-291
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 167

Conread position: 3-291
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 169

Conread position: 3-291
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 168

Conread position: 3-294
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 60, 174

Conread position: 3-294
Cow position:
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 53

Conread position: 4-199
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 165

Conread position: 4-287
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 38

Conread position: 5-288
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 165

Conread position: 5-291
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 162

Conread position: 7-281
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 9, 34

Conread position: 11-299
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 26

Conread position: 11-307
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 155

Conread position: 12-236
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 92, 159

Conread position: 15-287
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 89, 61

Conread position: 15-288
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 164

Conread position: 15-289
Cow position:
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 153

Conread position: 15-291
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 40

Conread position: 15-291
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 15-291
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 147

Conread position: 16-295
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 149

Show alignments to all cow chromosomes.