Cow genome map

Conread name: rlin01_c13r1.y1

Conread position: 1-103
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-179
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 36

Conread position: 1-198
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 36

Conread position: 1-200
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 168

Conread position: 1-208
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 13

Conread position: 1-241
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 171

Conread position: 1-278
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 65

Conread position: 1-284
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 99, 164

Conread position: 1-290
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 1-291
Cow position:
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 2-186
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 123

Conread position: 3-106
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 3-160
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 74

Conread position: 3-171
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 166

Conread position: 3-199
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 3-200
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 159

Conread position: 3-204
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 162

Conread position: 3-205
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 123

Conread position: 3-206
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 50

Conread position: 3-236
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 163

Conread position: 3-236
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 80, 74

Conread position: 3-254
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 60, 138

Conread position: 3-278
Cow position:
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 161

Conread position: 3-285
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 168

Conread position: 3-285
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 99, 75

Conread position: 3-286
Cow position:
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 160

Conread position: 3-287
Cow position:
Alignm length: 298
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 3-287
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 3-288
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 166

Conread position: 3-288
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 95, 164

Conread position: 3-291
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 169

Conread position: 3-291
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 147

Conread position: 3-291
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 167

Conread position: 3-291
Cow position:
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 170

Conread position: 3-291
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 60, 199

Conread position: 3-294
Cow position:
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 8

Conread position: 3-294
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 3-295
Cow position:
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 68

Conread position: 3-335
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 117

Conread position: 4-206
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 165

Conread position: 4-273
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 55, 173

Conread position: 5-174
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 141

Conread position: 5-188
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 162

Conread position: 5-203
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 55

Conread position: 5-248
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 26, 32

Conread position: 5-287
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 168

Conread position: 6-291
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 56, 166

Conread position: 9-291
Cow position:
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 161

Conread position: 9-291
Cow position:
Alignm length: 287
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 10-294
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 65

Conread position: 11-287
Cow position:
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 152

Conread position: 15-254
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 86, 150

Conread position: 15-272
Cow position:
Alignm length: 271
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 74, 39

Conread position: 15-291
Cow position:
Alignm length: 294
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 74, 151

Conread position: 17-208
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 156

Conread position: 18-291
Cow position:
Alignm length: 280
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 142

Conread position: 19-199
Cow position:
Alignm length: 188
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 142

Show alignments to all cow chromosomes.