Cow genome map
| Conread name: | rlin02_p2.y1 |
| Conread position: | 38-265 |
| Cow position: | chr27:25784448-25784223 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 41-265 |
| Cow position: | chr27:2681834-2682063 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 41-265 |
| Cow position: | chr27:9262961-9262737 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 151 |
| Conread position: | 41-265 |
| Cow position: | chr27:22329814-22330032 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 27 |
| Conread position: | 42-267 |
| Cow position: | chr27:28924207-28924422 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 43-264 |
| Cow position: | chr27:9089957-9090182 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 6, 99 |
| Conread position: | 44-257 |
| Cow position: | chr27:26654138-26653932 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 45-157 |
| Cow position: | chr27:15697664-15697777 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 45-252 |
| Cow position: | chr27:4834465-4834668 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 145 |
| Conread position: | 45-268 |
| Cow position: | chr27:5914252-5914481 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 80 |
| Conread position: | 46-215 |
| Cow position: | chr27:29467250-29467420 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 46-268 |
| Cow position: | chr27:15634022-15633799 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 177 |
| Conread position: | 47-186 |
| Cow position: | chr27:491405-491546 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 47-188 |
| Cow position: | chr27:16787976-16787833 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 47-223 |
| Cow position: | chr27:14380626-14380803 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 47-240 |
| Cow position: | chr27:24239807-24239614 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 47-244 |
| Cow position: | chr27:25799581-25799773 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 39, 129 |
| Conread position: | 47-257 |
| Cow position: | chr27:26785139-26785348 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 47-258 |
| Cow position: | chr27:17476885-17476681 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 47-259 |
| Cow position: | chr27:2936148-2936359 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 47-262 |
| Cow position: | chr27:15870697-15870468 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 47-263 |
| Cow position: | chr27:27930523-27930741 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 47-264 |
| Cow position: | chr27:344608-344390 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 182 |
| Conread position: | 47-264 |
| Cow position: | chr27:24295938-24295720 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 18, 180 |
| Conread position: | 47-264 |
| Cow position: | chr27:26552072-26551845 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 47-264 |
| Cow position: | chr27:28984091-28984305 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 47-265 |
| Cow position: | chr27:2331825-2332044 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 180 |
| Conread position: | 47-265 |
| Cow position: | chr27:3649803-3650022 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 47-265 |
| Cow position: | chr27:8201257-8201477 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 47-265 |
| Cow position: | chr27:8291163-8291390 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 47-265 |
| Cow position: | chr27:9332989-9333208 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 47-265 |
| Cow position: | chr27:11256364-11256146 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 47-265 |
| Cow position: | chr27:11434497-11434703 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 47-265 |
| Cow position: | chr27:13182962-13182749 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 22, 18 |
| Conread position: | 47-265 |
| Cow position: | chr27:13316881-13317096 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 47-265 |
| Cow position: | chr27:13353628-13353847 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 173 |
| Conread position: | 47-265 |
| Cow position: | chr27:13409317-13409536 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 11, 173 |
| Conread position: | 47-265 |
| Cow position: | chr27:13901446-13901664 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 18, 166 |
| Conread position: | 47-265 |
| Cow position: | chr27:15033569-15033350 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 166 |
| Conread position: | 47-265 |
| Cow position: | chr27:15272748-15272533 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 47-265 |
| Cow position: | chr27:15866980-15866766 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 47-265 |
| Cow position: | chr27:16332157-16331949 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 171 |
| Conread position: | 47-265 |
| Cow position: | chr27:19300244-19300025 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 47-265 |
| Cow position: | chr27:21350169-21350388 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 18, 172 |
| Conread position: | 47-265 |
| Cow position: | chr27:21451765-21451987 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 47-265 |
| Cow position: | chr27:26856360-26856581 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 39, 168 |
| Conread position: | 47-265 |
| Cow position: | chr27:27193025-27192809 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 47-265 |
| Cow position: | chr27:27501515-27501727 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 111 |
| Conread position: | 47-265 |
| Cow position: | chr27:30677759-30677548 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 47-267 |
| Cow position: | chr27:5990724-5990512 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 12, 120 |
| Conread position: | 47-267 |
| Cow position: | chr27:8262160-8262382 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 178 |
| Conread position: | 47-267 |
| Cow position: | chr27:30036191-30036419 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 47-268 |
| Cow position: | chr27:165597-165376 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 47-268 |
| Cow position: | chr27:791724-791502 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 47-268 |
| Cow position: | chr27:1081840-1081632 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 119 |
| Conread position: | 47-268 |
| Cow position: | chr27:2001167-2001389 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 18, 180 |
| Conread position: | 47-268 |
| Cow position: | chr27:2557671-2557450 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 154 |
| Conread position: | 47-268 |
| Cow position: | chr27:3653378-3653156 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 47-268 |
| Cow position: | chr27:3990478-3990257 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 18, 177 |
| Conread position: | 47-268 |
| Cow position: | chr27:4982694-4982904 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 47-268 |
| Cow position: | chr27:5983708-5983487 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 18, 173 |
| Conread position: | 47-268 |
| Cow position: | chr27:8427180-8427402 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 47-268 |
| Cow position: | chr27:8959694-8959473 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 172 |
| Conread position: | 47-268 |
| Cow position: | chr27:8972766-8972986 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 205 |
| Conread position: | 47-268 |
| Cow position: | chr27:9970493-9970715 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 47-268 |
| Cow position: | chr27:10383759-10383974 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 47-268 |
| Cow position: | chr27:10579269-10579487 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 47-268 |
| Cow position: | chr27:11481253-11481475 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 18, 176 |
| Conread position: | 47-268 |
| Cow position: | chr27:12006470-12006692 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 47-268 |
| Cow position: | chr27:12239390-12239611 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 47-268 |
| Cow position: | chr27:13422842-13422620 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 47-268 |
| Cow position: | chr27:14297529-14297751 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 47-268 |
| Cow position: | chr27:15099964-15100183 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 47-268 |
| Cow position: | chr27:16031075-16030853 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 18, 173 |
| Conread position: | 47-268 |
| Cow position: | chr27:19523387-19523166 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 47-268 |
| Cow position: | chr27:20810738-20810960 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 47-268 |
| Cow position: | chr27:22797337-22797115 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 18, 180 |
| Conread position: | 47-268 |
| Cow position: | chr27:25800889-25800667 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 18, 173 |
| Conread position: | 47-268 |
| Cow position: | chr27:26330254-26330476 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 180 |
| Conread position: | 47-268 |
| Cow position: | chr27:27291715-27291937 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 18, 176 |
| Conread position: | 47-268 |
| Cow position: | chr27:29036060-29035838 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 47-268 |
| Cow position: | chr27:29811624-29811845 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 178 |
| Conread position: | 47-268 |
| Cow position: | chr27:30306947-30306722 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 183 |
| Conread position: | 48-214 |
| Cow position: | chr27:1124305-1124136 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 48-241 |
| Cow position: | chr27:1501837-1502027 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 48-252 |
| Cow position: | chr27:5423542-5423743 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 48-257 |
| Cow position: | chr27:14669513-14669737 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 48-261 |
| Cow position: | chr27:18954366-18954579 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 48-261 |
| Cow position: | chr27:25112483-25112703 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 48-262 |
| Cow position: | chr27:18559611-18559397 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 48-265 |
| Cow position: | chr27:816440-816222 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 10, 172 |
| Conread position: | 48-265 |
| Cow position: | chr27:4818737-4818963 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 48-265 |
| Cow position: | chr27:4828822-4829049 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 48-265 |
| Cow position: | chr27:5268679-5268887 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 48-265 |
| Cow position: | chr27:6018882-6019096 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 48-265 |
| Cow position: | chr27:10324602-10324389 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 48-265 |
| Cow position: | chr27:11489946-11490161 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 8, 142 |
| Conread position: | 48-265 |
| Cow position: | chr27:15405944-15406160 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 48-265 |
| Cow position: | chr27:17050121-17049909 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 47 |
| Conread position: | 48-265 |
| Cow position: | chr27:27557124-27557339 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 48-267 |
| Cow position: | chr27:17565311-17565105 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 48-267 |
| Cow position: | chr27:19388874-19388647 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 151 |
| Conread position: | 48-268 |
| Cow position: | chr27:1188985-1189200 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 176 |
| Conread position: | 48-268 |
| Cow position: | chr27:8726910-8727136 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 49-263 |
| Cow position: | chr27:28907907-28907695 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 49-267 |
| Cow position: | chr27:1141020-1141239 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 50-263 |
| Cow position: | chr27:10283458-10283672 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 50-265 |
| Cow position: | chr27:12277434-12277649 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 51-268 |
| Cow position: | chr27:723681-723899 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 151 |
| Conread position: | 52-265 |
| Cow position: | chr27:15872002-15871791 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 52-265 |
| Cow position: | chr27:25792217-25791998 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 52-268 |
| Cow position: | chr27:1031227-1031010 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 150 |
| Conread position: | 52-268 |
| Cow position: | chr27:1521001-1521218 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 52-268 |
| Cow position: | chr27:12750863-12751075 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 53-265 |
| Cow position: | chr27:21283922-21283706 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 7, 171 |
| Conread position: | 54-253 |
| Cow position: | chr27:2849102-2848907 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 56-268 |
| Cow position: | chr27:5925594-5925807 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 59-265 |
| Cow position: | chr27:10670372-10670577 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 60-268 |
| Cow position: | chr27:4331400-4331195 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 32, 75 |
| Conread position: | 64-200 |
| Cow position: | chr27:13272907-13273043 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 64-250 |
| Cow position: | chr27:8592726-8592904 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 64-264 |
| Cow position: | chr27:20865697-20865900 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 65-267 |
| Cow position: | chr27:4805131-4805322 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 69-252 |
| Cow position: | chr27:27729146-27728958 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 76-259 |
| Cow position: | chr27:26644890-26644720 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 76-263 |
| Cow position: | chr27:23454332-23454514 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 82-268 |
| Cow position: | chr27:12173300-12173480 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 85-258 |
| Cow position: | chr27:19963287-19963108 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 86-237 |
| Cow position: | chr27:4389351-4389507 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 87-265 |
| Cow position: | chr27:18943251-18943432 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 90-259 |
| Cow position: | chr27:22586199-22586365 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 91-265 |
| Cow position: | chr27:13844345-13844172 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 109, 99 |
| Conread position: | 91-265 |
| Cow position: | chr27:19932188-19932016 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 91-265 |
| Cow position: | chr27:24055057-24055224 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 91-265 |
| Cow position: | chr27:30777357-30777178 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 67, 105 |
| Conread position: | 91-268 |
| Cow position: | chr27:8187204-8187376 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 91-268 |
| Cow position: | chr27:8202632-8202456 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 91-268 |
| Cow position: | chr27:16045097-16045273 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 91-268 |
| Cow position: | chr27:20001448-20001272 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 96, 109 |
| Conread position: | 101-268 |
| Cow position: | chr27:19487607-19487440 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 86, 99 |
| Conread position: | 103-265 |
| Cow position: | chr27:26849320-26849165 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 104-268 |
| Cow position: | chr27:16823587-16823421 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 107-265 |
| Cow position: | chr27:11414164-11414015 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 107-267 |
| Cow position: | chr27:30177130-30176970 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 109-265 |
| Cow position: | chr27:12190660-12190815 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 118-268 |
| Cow position: | chr27:5853143-5853291 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 121-267 |
| Cow position: | chr27:22400553-22400404 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 123-268 |
| Cow position: | chr27:12147292-12147436 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 140-265 |
| Cow position: | chr27:7084851-7084727 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 145-268 |
| Cow position: | chr27:1293669-1293791 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 146-265 |
| Cow position: | chr27:670845-670722 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.