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Cow genome map

           
Conread name:
           
rlin02_p2.y1
        

               
Conread position:
               
9-216
               

               
Cow position:
               
chrX:25360151-25360355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
37-265
               

               
Cow position:
               
chrX:160555-160781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
49, 157
               

               
Conread position:
               
38-268
               

               
Cow position:
               
chrX:2932594-2932364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
38-268
               

               
Cow position:
               
chrX:27450926-27450704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
8, 162
               

               
Conread position:
               
39-258
               

               
Cow position:
               
chrX:20652540-20652757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
40-268
               

               
Cow position:
               
chrX:5892356-5892584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 161
               

               
Conread position:
               
41-267
               

               
Cow position:
               
chrX:2008572-2008355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
41-267
               

               
Cow position:
               
chrX:16688396-16688623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
42-265
               

               
Cow position:
               
chrX:2524604-2524370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
42-265
               

               
Cow position:
               
chrX:3211408-3211192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
42-265
               

               
Cow position:
               
chrX:6543392-6543618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 50
               

               
Conread position:
               
42-267
               

               
Cow position:
               
chrX:25451465-25451679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
43-220
               

               
Cow position:
               
chrX:29927907-29927734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
43-265
               

               
Cow position:
               
chrX:6406482-6406701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
43-265
               

               
Cow position:
               
chrX:10440696-10440481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 148
               

               
Conread position:
               
43-268
               

               
Cow position:
               
chrX:7755035-7755261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
6, 60
               

               
Conread position:
               
43-268
               

               
Cow position:
               
chrX:28518591-28518364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 171
               

               
Conread position:
               
43-268
               

               
Cow position:
               
chrX:29912468-29912695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 178
               

               
Conread position:
               
44-265
               

               
Cow position:
               
chrX:3121766-3121542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
44-265
               

               
Cow position:
               
chrX:22125724-22125502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 176
               

               
Conread position:
               
44-267
               

               
Cow position:
               
chrX:6026566-6026345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
44-268
               

               
Cow position:
               
chrX:9899207-9898985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
45-200
               

               
Cow position:
               
chrX:13414674-13414518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
45-258
               

               
Cow position:
               
chrX:15039939-15039732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
45-262
               

               
Cow position:
               
chrX:41847398-41847180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
45-265
               

               
Cow position:
               
chrX:23697273-23697048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
45-265
               

               
Cow position:
               
chrX:26508359-26508575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chrX:3081999-3081775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chrX:5293710-5293491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chrX:22564550-22564331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
45-268
               

               
Cow position:
               
chrX:24413162-24413386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
46-263
               

               
Cow position:
               
chrX:20800924-20801124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
46-265
               

               
Cow position:
               
chrX:17158678-17158465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
46-265
               

               
Cow position:
               
chrX:28866879-28866664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
46-268
               

               
Cow position:
               
chrX:29849491-29849273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
47-161
               

               
Cow position:
               
chrX:40184207-40184323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-168
               

               
Cow position:
               
chrX:26622686-26622565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
47-191
               

               
Cow position:
               
chrX:23221908-23221765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
47-194
               

               
Cow position:
               
chrX:17889726-17889578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
47-195
               

               
Cow position:
               
chrX:3406208-3406057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-196
               

               
Cow position:
               
chrX:20790406-20790256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
47-199
               

               
Cow position:
               
chrX:18455636-18455482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-200
               

               
Cow position:
               
chrX:22118360-22118208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
47-200
               

               
Cow position:
               
chrX:22819212-22819368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-200
               

               
Cow position:
               
chrX:29288132-29288282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
47-200
               

               
Cow position:
               
chrX:34221899-34222054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-206
               

               
Cow position:
               
chrX:25817695-25817527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
47-209
               

               
Cow position:
               
chrX:7484941-7485105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-215
               

               
Cow position:
               
chrX:28605956-28605792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
47-215
               

               
Cow position:
               
chrX:45373974-45373804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chrX:8104147-8103977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chrX:22838406-22838577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chrX:30964852-30964681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-219
               

               
Cow position:
               
chrX:6235717-6235548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
47-220
               

               
Cow position:
               
chrX:4767829-4767997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
47-229
               

               
Cow position:
               
chrX:150606-150789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
47-232
               

               
Cow position:
               
chrX:8144744-8144565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
47-232
               

               
Cow position:
               
chrX:42222639-42222453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
47-237
               

               
Cow position:
               
chrX:24316958-24317152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
47-250
               

               
Cow position:
               
chrX:11499642-11499438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-251
               

               
Cow position:
               
chrX:35937942-35937742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
47-255
               

               
Cow position:
               
chrX:15140402-15140199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
47-259
               

               
Cow position:
               
chrX:5361144-5361357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-261
               

               
Cow position:
               
chrX:6279469-6279254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
47-261
               

               
Cow position:
               
chrX:13031516-13031303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
47-261
               

               
Cow position:
               
chrX:19929568-19929783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 146
               

               
Conread position:
               
47-262
               

               
Cow position:
               
chrX:38228183-38227961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-263
               

               
Cow position:
               
chrX:25573486-25573695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
47-263
               

               
Cow position:
               
chrX:27305063-27305280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
47-263
               

               
Cow position:
               
chrX:33763279-33763497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chrX:1550099-1550317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chrX:2479494-2479275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 149
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chrX:5406194-5406412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
19, 180
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chrX:14597980-14598198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chrX:29759822-29760039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:1056253-1056035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:2500496-2500278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:11146199-11145980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:11855299-11855522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:12310255-12310032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:14801685-14801465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:15151541-15151322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:15621397-15621179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:16021242-16021029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:16782414-16782633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:17663782-17663566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:17891680-17891900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:21063607-21063824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:21254913-21255128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:21793724-21793944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:22601276-22601062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:23317277-23317059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:23341857-23341639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:23415561-23415343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:24292529-24292326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:25459505-25459286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 178
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:26230624-26230405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:26442117-26441906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:27615946-27616156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:28156666-28156888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:28624626-28624408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
42, 175
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:28879459-28879253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:29700809-29700600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:29722366-29722569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:29942291-29942503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:30060021-30060241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 160
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:30681370-30681151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:31728602-31728814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:34442308-34442089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:36691967-36692187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:36839840-36840055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:37404100-37403883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:39556662-39556441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:40070477-40070257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:40365611-40365390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:40581029-40580810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:40693595-40693368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 208
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:41791581-41791359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-265
               

               
Cow position:
               
chrX:44193306-44193087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
47-266
               

               
Cow position:
               
chrX:7572525-7572735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
47-266
               

               
Cow position:
               
chrX:21662176-21662390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
47-266
               

               
Cow position:
               
chrX:30836521-30836742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-266
               

               
Cow position:
               
chrX:35847359-35847579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
47-267
               

               
Cow position:
               
chrX:2300016-2300235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
47-267
               

               
Cow position:
               
chrX:27704733-27704953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:323048-323271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 167
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:671859-671647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 162
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:2103539-2103761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:2159899-2160121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:2274054-2274273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:2293466-2293244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:2486498-2486274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:2579553-2579775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
19, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:2813348-2813126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:3096619-3096397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:3360955-3361177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:3372718-3372497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 179
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:3418002-3417781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:3464942-3464720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:3596599-3596819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:3649688-3649467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:4342885-4343107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:4622819-4622598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:4905853-4905634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5124225-5124003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5248521-5248741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5280718-5280497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5289550-5289330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5320582-5320362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 142
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5332299-5332081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5334681-5334463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5354168-5353947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5646970-5646748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:5866280-5866502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:6372314-6372537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:6453831-6454053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:6581069-6581290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:6870430-6870207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:7096592-7096814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:7551667-7551445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
19, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:8435068-8434847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:8482581-8482795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:8529674-8529896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:8590716-8590938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 146
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:9011465-9011683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:9128189-9128412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:9535900-9536115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:9642298-9642076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:10059599-10059821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:10528651-10528418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:11409200-11408978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:11461862-11461640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:11566048-11566270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:11950352-11950133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:11976312-11976090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:12145233-12145458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:12346030-12346252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:13031077-13030855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:13206089-13206308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:13406152-13405934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:13928608-13928395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:14050060-14049838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:14125110-14124890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:14162326-14162548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:14459033-14458811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:14462449-14462665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:15091630-15091413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:15113806-15114027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:15260485-15260263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:15977819-15977597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16040545-16040325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16046281-16046503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16086989-16086767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16278786-16279008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16359873-16359653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 146
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16465435-16465656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16525924-16526146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16702805-16703027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 186
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16711090-16711312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:16808680-16808458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:17782634-17782856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:17994593-17994815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:18193824-18194046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:18222548-18222769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
45, 172
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:18244119-18244337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:18656671-18656449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:18898515-18898293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 178
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:18950602-18950380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:19109907-19109685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:19398912-19399134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:19657631-19657853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:20020713-20020933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 186
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:20032697-20032475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:20356861-20356639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:20953667-20953889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:21226611-21226833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:21343529-21343752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:21389712-21389934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:21415001-21415223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:21685753-21685975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
8, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:21767934-21768160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 177
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:22077208-22076986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:22538899-22538677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:22579253-22579032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:22811024-22811246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:22869953-22870178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 183
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:22887795-22888016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:23022447-23022669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:23134724-23134935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:23387404-23387182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 146
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:23395741-23395963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 146
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:23452311-23452089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
13, 182
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:23572683-23572460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 177
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:23986384-23986606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:24174027-24173809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:24442105-24441883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:24467989-24467769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
45, 171
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:24588600-24588380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:24769722-24769501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:25289545-25289323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:26275273-26275494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:26760434-26760212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:26974044-26974266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:27095263-27095475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:27318365-27318587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:27590896-27590678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:27754562-27754785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:27758843-27759063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:27977700-27977475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:28313559-28313781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:28588105-28588327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:28753202-28752984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29083201-29083423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29099551-29099772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 175
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29170208-29169985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29225612-29225834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29790683-29790463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29880146-29879924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29908068-29907846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:29916211-29915990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30135208-30134983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30159856-30159639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30164104-30163882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30165528-30165315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30180790-30180571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30196432-30196653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30199858-30199636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30228979-30228758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:30455487-30455266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:31201976-31202197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:31261499-31261278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:31495870-31496092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:31978707-31978485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:32145121-32144912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:32584797-32584575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:32643620-32643842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:33685265-33685487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:33803861-33803648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 141
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:34518860-34519082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:34553880-34554100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:34761200-34761422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:35240006-35240222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:35532989-35533210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
45, 142
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:36195230-36195448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:36479501-36479279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:36535597-36535379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:36729518-36729740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:37080384-37080163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:37134499-37134281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:37815725-37815947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:37852270-37852495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:38150822-38151044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:38231133-38230911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:38330518-38330738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:38961716-38961490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:39185307-39185529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:39293084-39292862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:39548533-39548755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 166
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:39560525-39560296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:39701989-39702209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:39713685-39713907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
19, 180
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:39731003-39730783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:40225106-40224886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:41156445-41156667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
18, 176
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:45236600-45236822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:45903311-45903533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
47-268
               

               
Cow position:
               
chrX:46296795-46297016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
48-200
               

               
Cow position:
               
chrX:20675004-20675156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
48-208
               

               
Cow position:
               
chrX:33537715-33537873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
48-214
               

               
Cow position:
               
chrX:25405237-25405069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 144
               

               
Conread position:
               
48-218
               

               
Cow position:
               
chrX:4407018-4407186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
48-220
               

               
Cow position:
               
chrX:28133233-28133405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
48-252
               

               
Cow position:
               
chrX:35287561-35287779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
48-253
               

               
Cow position:
               
chrX:40560405-40560200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 171
               

               
Conread position:
               
48-257
               

               
Cow position:
               
chrX:38218112-38218329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
48-259
               

               
Cow position:
               
chrX:44018838-44019046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
48-261
               

               
Cow position:
               
chrX:12102826-12102616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
48-261
               

               
Cow position:
               
chrX:37453343-37453557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 176
               

               
Conread position:
               
48-261
               

               
Cow position:
               
chrX:37832329-37832123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
48-263
               

               
Cow position:
               
chrX:24309965-24309757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
48-263
               

               
Cow position:
               
chrX:45658942-45658723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chrX:10412840-10412621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chrX:23218209-23218419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
197, 46
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chrX:25204471-25204689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chrX:27628988-27629202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 145
               

               
Conread position:
               
48-264
               

               
Cow position:
               
chrX:41527379-41527163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:620129-619906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:2323842-2324060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 175
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:4995745-4995968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:7277083-7277287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:11991013-11990798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:12289857-12290091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:12465167-12465385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
17, 175
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:13178473-13178254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 178
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:21592426-21592644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 172
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:23969489-23969704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:24425380-24425162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:25282359-25282140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:25847936-25848154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:28666823-28666599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:29876923-29876704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:30089911-30089700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:30113198-30113412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:30422000-30421795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:33583830-33584042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:35028384-35028597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:35388784-35388554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 161
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:37118045-37118251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:37488864-37489078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:39939618-39939400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 174
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:40268616-40268829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:44366941-44367143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
48-265
               

               
Cow position:
               
chrX:47000519-47000298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 178
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chrX:39463911-39463688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
48-266
               

               
Cow position:
               
chrX:39559222-39559012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
48-267
               

               
Cow position:
               
chrX:4408692-4408916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 94
               

               
Conread position:
               
48-267
               

               
Cow position:
               
chrX:4751231-4751017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
48-267
               

               
Cow position:
               
chrX:23974302-23974088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
48-267
               

               
Cow position:
               
chrX:38852296-38852514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:865531-865752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 175
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:2382602-2382823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:2559824-2559604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
34, 171
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:5392440-5392219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 179
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:12360024-12360244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 171
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:13800682-13800467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
185, 93
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:17054704-17054925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 172
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:18488578-18488358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
44, 153
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:19608811-19609032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 172
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:23269066-23268857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:26447221-26447435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
48-268
               

               
Cow position:
               
chrX:30172571-30172351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
49-200
               

               
Cow position:
               
chrX:45400883-45400727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
49-264
               

               
Cow position:
               
chrX:6766599-6766391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chrX:1947811-1947606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chrX:4482095-4482306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chrX:12996728-12996502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chrX:13912229-13912449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chrX:20503777-20503999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chrX:31372598-31372815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chrX:33822227-33822451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
49-266
               

               
Cow position:
               
chrX:30053332-30053114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 178
               

               
Conread position:
               
49-267
               

               
Cow position:
               
chrX:11744403-11744623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 173
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:8640924-8641144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
16, 171
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:10445279-10445059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 171
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:24006692-24006473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:24174817-24174596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 176
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:24483227-24483013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:27423147-27422928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 171
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:28503472-28503692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 178
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:29842030-29841813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:29892223-29892442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 174
               

               
Conread position:
               
49-268
               

               
Cow position:
               
chrX:40384191-40384402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chrX:10866732-10866514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chrX:13071443-13071228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 177
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chrX:13092003-13091788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
15, 177
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chrX:16325389-16325176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chrX:34008888-34009102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 202
               

               
Conread position:
               
50-265
               

               
Cow position:
               
chrX:34237915-34238127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
50-267
               

               
Cow position:
               
chrX:24109467-24109252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
50-268
               

               
Cow position:
               
chrX:7444042-7444263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 172
               

               
Conread position:
               
51-265
               

               
Cow position:
               
chrX:33827901-33827679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
51-268
               

               
Cow position:
               
chrX:9169476-9169258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 153
               

               
Conread position:
               
52-249
               

               
Cow position:
               
chrX:30688218-30688415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
52-264
               

               
Cow position:
               
chrX:29029557-29029347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
52-264
               

               
Cow position:
               
chrX:41734052-41733839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
52-265
               

               
Cow position:
               
chrX:16035375-16035160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
52-268
               

               
Cow position:
               
chrX:20999136-20998921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chrX:10301272-10301475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
54-216
               

               
Cow position:
               
chrX:47380359-47380193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
54-265
               

               
Cow position:
               
chrX:24232025-24232232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
54-266
               

               
Cow position:
               
chrX:24826153-24826358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
55-265
               

               
Cow position:
               
chrX:5639784-5639584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
55-265
               

               
Cow position:
               
chrX:28633323-28633123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
55-268
               

               
Cow position:
               
chrX:34253371-34253585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chrX:44901281-44901471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chrX:38935569-38935780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 173
               

               
Conread position:
               
59-268
               

               
Cow position:
               
chrX:24509014-24509223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
59-268
               

               
Cow position:
               
chrX:30139637-30139428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
59-268
               

               
Cow position:
               
chrX:30751923-30752131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 162
               

               
Conread position:
               
59-268
               

               
Cow position:
               
chrX:30824795-30825004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
60-265
               

               
Cow position:
               
chrX:35609134-35609341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
61-213
               

               
Cow position:
               
chrX:22308428-22308274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
62-268
               

               
Cow position:
               
chrX:12178829-12179035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
64-252
               

               
Cow position:
               
chrX:32419335-32419514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
64-265
               

               
Cow position:
               
chrX:40788287-40788487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
65-268
               

               
Cow position:
               
chrX:33763497-33763700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
68-267
               

               
Cow position:
               
chrX:35024216-35024410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
69-260
               

               
Cow position:
               
chrX:41106845-41106658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
69-268
               

               
Cow position:
               
chrX:30144127-30143928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 153
               

               
Conread position:
               
70-265
               

               
Cow position:
               
chrX:7177828-7178016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 122
               

               
Conread position:
               
70-268
               

               
Cow position:
               
chrX:24735110-24735299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
71-265
               

               
Cow position:
               
chrX:2185408-2185593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
71-268
               

               
Cow position:
               
chrX:20742151-20742347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
73-253
               

               
Cow position:
               
chrX:45364622-45364440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
75-268
               

               
Cow position:
               
chrX:39387267-39387073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 144
               

               
Conread position:
               
76-265
               

               
Cow position:
               
chrX:2763737-2763918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
76-265
               

               
Cow position:
               
chrX:34990228-34990414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
76-265
               

               
Cow position:
               
chrX:40278981-40279162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
76-267
               

               
Cow position:
               
chrX:11083442-11083252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 176
               

               
Conread position:
               
81-265
               

               
Cow position:
               
chrX:35408805-35408987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
82-261
               

               
Cow position:
               
chrX:37363894-37364071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
123, 104
               

               
Conread position:
               
82-265
               

               
Cow position:
               
chrX:27408288-27408109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
85-264
               

               
Cow position:
               
chrX:6673553-6673728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
85-265
               

               
Cow position:
               
chrX:11613678-11613856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
86-264
               

               
Cow position:
               
chrX:44053980-44054158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-268
               

               
Cow position:
               
chrX:19473985-19473804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
89-267
               

               
Cow position:
               
chrX:16517954-16517777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
113, 102
               

               
Conread position:
               
89-268
               

               
Cow position:
               
chrX:16854208-16854030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
90-260
               

               
Cow position:
               
chrX:26633899-26633730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 98
               

               
Conread position:
               
90-268
               

               
Cow position:
               
chrX:28706281-28706458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
91-242
               

               
Cow position:
               
chrX:33721132-33720981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 135
               

               
Conread position:
               
91-265
               

               
Cow position:
               
chrX:29779903-29780082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
91-265
               

               
Cow position:
               
chrX:36250679-36250509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chrX:362273-362097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chrX:18451899-18451723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chrX:20878587-20878411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chrX:27996831-27997007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 109
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chrX:28327288-28327112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chrX:30817089-30816913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
91-268
               

               
Cow position:
               
chrX:34719693-34719869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
92-268
               

               
Cow position:
               
chrX:3569232-3569407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
93-261
               

               
Cow position:
               
chrX:40545440-40545273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
93-265
               

               
Cow position:
               
chrX:37781886-37781720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 124
               

               
Conread position:
               
96-267
               

               
Cow position:
               
chrX:38007800-38007627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
97-265
               

               
Cow position:
               
chrX:13786192-13786029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
97-267
               

               
Cow position:
               
chrX:10438740-10438583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
97-268
               

               
Cow position:
               
chrX:36513363-36513533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
100-265
               

               
Cow position:
               
chrX:4177011-4177172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
100-265
               

               
Cow position:
               
chrX:40827550-40827391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
101-268
               

               
Cow position:
               
chrX:10931862-10932029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
104-268
               

               
Cow position:
               
chrX:6492928-6493089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
104-268
               

               
Cow position:
               
chrX:20580354-20580194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
105-262
               

               
Cow position:
               
chrX:27445871-27446029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 114
               

               
Conread position:
               
106-268
               

               
Cow position:
               
chrX:15346774-15346613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
108-241
               

               
Cow position:
               
chrX:19128019-19127887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
109-259
               

               
Cow position:
               
chrX:6690928-6690787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chrX:5426515-5426361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chrX:28559632-28559478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
114-268
               

               
Cow position:
               
chrX:5375567-5375720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
117-266
               

               
Cow position:
               
chrX:36794215-36794363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
136-268
               

               
Cow position:
               
chrX:31605123-31604992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
151-268
               

               
Cow position:
               
chrX:7119404-7119288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 49
               
Show alignments to all cow chromosomes.