Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-238 |
| Cow position: | chr10:68825950-68826199 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 131, 196 |
| Conread position: | 1-389 |
| Cow position: | chr10:25004694-25004306 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 123, 266 |
| Conread position: | 1-392 |
| Cow position: | chr10:19141829-19142235 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-392 |
| Cow position: | chr10:22104262-22103867 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 123, 86 |
| Conread position: | 1-401 |
| Cow position: | chr10:14333061-14333478 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 277 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 123, 290 |
| Conread position: | 1-401 |
| Cow position: | chr10:16928938-16928530 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 123, 222 |
| Conread position: | 1-401 |
| Cow position: | chr10:28031157-28031562 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 13 |
| Conread position: | 1-401 |
| Cow position: | chr10:51558180-51557763 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-419 |
| Cow position: | chr10:7279322-7279749 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 367 |
| Conread position: | 1-419 |
| Cow position: | chr10:25264306-25263910 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 285 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 112, 41 |
| Conread position: | 1-419 |
| Cow position: | chr10:38842947-38842512 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 1-423 |
| Cow position: | chr10:19514012-19513575 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 123, 346 |
| Conread position: | 2-419 |
| Cow position: | chr10:37772665-37772241 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 139, 118 |
| Conread position: | 3-322 |
| Cow position: | chr10:14806713-14806381 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 43 |
| Conread position: | 3-356 |
| Cow position: | chr10:19842448-19842086 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 121, 172 |
| Conread position: | 3-360 |
| Cow position: | chr10:20936088-20936457 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 3-364 |
| Cow position: | chr10:29629491-29629864 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 116, 247 |
| Conread position: | 3-391 |
| Cow position: | chr10:32008855-32008452 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 167 |
| Conread position: | 3-391 |
| Cow position: | chr10:41879720-41879313 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 3-401 |
| Cow position: | chr10:63625843-63625429 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 256 |
| Conread position: | 3-413 |
| Cow position: | chr10:52826849-52827260 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 110, 154 |
| Conread position: | 3-419 |
| Cow position: | chr10:7895703-7896133 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 344 |
| Conread position: | 3-419 |
| Cow position: | chr10:22344245-22343818 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 97, 133 |
| Conread position: | 3-419 |
| Cow position: | chr10:25563778-25564204 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 169 |
| Conread position: | 3-419 |
| Cow position: | chr10:26292708-26293140 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 110, 206 |
| Conread position: | 3-419 |
| Cow position: | chr10:35824566-35824995 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 3-419 |
| Cow position: | chr10:39210538-39210109 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-419 |
| Cow position: | chr10:41160195-41159770 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 236 |
| Conread position: | 3-419 |
| Cow position: | chr10:46762980-46762557 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 110, 262 |
| Conread position: | 3-419 |
| Cow position: | chr10:47909396-47908971 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 110, 44 |
| Conread position: | 3-420 |
| Cow position: | chr10:278572-279005 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 7-238 |
| Cow position: | chr10:16320446-16320203 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 20-391 |
| Cow position: | chr10:50017602-50017982 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 87 |
| Conread position: | 20-418 |
| Cow position: | chr10:24297742-24298144 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 60, 251 |
| Conread position: | 20-419 |
| Cow position: | chr10:21516249-21516661 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 109, 362 |
| Conread position: | 20-419 |
| Cow position: | chr10:32086450-32086037 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 20-429 |
| Cow position: | chr10:33221068-33221482 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 22-392 |
| Cow position: | chr10:21426540-21426924 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 102, 325 |
| Conread position: | 23-391 |
| Cow position: | chr10:33868425-33868810 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 33-394 |
| Cow position: | chr10:16552526-16552905 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 318 |
| Conread position: | 33-401 |
| Cow position: | chr10:2118275-2118660 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 33-418 |
| Cow position: | chr10:23908273-23907870 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 160 |
| Conread position: | 33-428 |
| Cow position: | chr10:41708345-41708749 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 182 |
| Conread position: | 34-419 |
| Cow position: | chr10:6287494-6287095 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 34-423 |
| Cow position: | chr10:32811265-32810890 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 130, 50 |
| Conread position: | 39-404 |
| Cow position: | chr10:10584872-10584496 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 85, 238 |
| Conread position: | 39-418 |
| Cow position: | chr10:44705965-44706360 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 300 |
| Conread position: | 41-417 |
| Cow position: | chr10:47964357-47964735 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 93 |
| Conread position: | 166-429 |
| Cow position: | chr10:923175-923437 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 53, 39 |
Show alignments to all cow chromosomes.