Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-224 |
| Cow position: | chr13:48644794-48644563 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 48 |
| Conread position: | 1-391 |
| Cow position: | chr13:34039847-34040256 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 1-401 |
| Cow position: | chr13:35760051-35759636 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 111, 106 |
| Conread position: | 1-419 |
| Cow position: | chr13:4943879-4943447 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 123, 346 |
| Conread position: | 1-419 |
| Cow position: | chr13:15921964-15922396 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 120, 346 |
| Conread position: | 1-423 |
| Cow position: | chr13:32734693-32735129 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 120, 307 |
| Conread position: | 3-312 |
| Cow position: | chr13:36672148-36671823 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-338 |
| Cow position: | chr13:31731078-31731421 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 110, 74 |
| Conread position: | 3-348 |
| Cow position: | chr13:18122379-18122740 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-349 |
| Cow position: | chr13:1882996-1883354 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 3-365 |
| Cow position: | chr13:32080356-32079978 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 3-419 |
| Cow position: | chr13:561895-562328 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 204 |
| Conread position: | 3-419 |
| Cow position: | chr13:5499495-5499919 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 110, 319 |
| Conread position: | 3-419 |
| Cow position: | chr13:13327430-13327002 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 146 |
| Conread position: | 3-419 |
| Cow position: | chr13:24932301-24932733 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-419 |
| Cow position: | chr13:33523465-33523897 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 3-419 |
| Cow position: | chr13:34509324-34509748 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 110, 338 |
| Conread position: | 3-419 |
| Cow position: | chr13:35539658-35539224 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 3-419 |
| Cow position: | chr13:60647093-60647520 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 282 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 110, 321 |
| Conread position: | 4-407 |
| Cow position: | chr13:48548635-48548229 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 122, 145 |
| Conread position: | 5-393 |
| Cow position: | chr13:4855577-4855189 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 83 |
| Conread position: | 5-419 |
| Cow position: | chr13:19566208-19565776 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 116, 215 |
| Conread position: | 5-419 |
| Cow position: | chr13:32982908-32983339 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 284 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 16-423 |
| Cow position: | chr13:37797150-37797564 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 18-391 |
| Cow position: | chr13:13902340-13901954 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 13, 261 |
| Conread position: | 18-404 |
| Cow position: | chr13:19637624-19637225 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 8, 184 |
| Conread position: | 18-419 |
| Cow position: | chr13:32922796-32923211 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 20-429 |
| Cow position: | chr13:34870438-34870012 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 23-389 |
| Cow position: | chr13:38624599-38624237 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 23-418 |
| Cow position: | chr13:6665662-6666077 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 101, 200 |
| Conread position: | 31-388 |
| Cow position: | chr13:21879339-21879720 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 220 |
| Conread position: | 33-401 |
| Cow position: | chr13:21908665-21909020 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 300, 71 |
| Conread position: | 40-419 |
| Cow position: | chr13:50111924-50111528 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 43-404 |
| Cow position: | chr13:34017940-34018319 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 57-392 |
| Cow position: | chr13:26588649-26588999 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 164 |
| Conread position: | 133-423 |
| Cow position: | chr13:6647049-6646772 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 244, 76 |
| Conread position: | 151-414 |
| Cow position: | chr13:51790454-51790188 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 68, 59 |
Show alignments to all cow chromosomes.