Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-365 |
| Cow position: | chr17:18100496-18100874 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 1-419 |
| Cow position: | chr17:14242412-14241969 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 3-401 |
| Cow position: | chr17:2176562-2176150 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 3-419 |
| Cow position: | chr17:2264771-2264342 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 168 |
| Conread position: | 3-419 |
| Cow position: | chr17:14214452-14214884 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 110, 86 |
| Conread position: | 3-419 |
| Cow position: | chr17:15438382-15437948 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 83, 289 |
| Conread position: | 3-419 |
| Cow position: | chr17:15808557-15808123 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-421 |
| Cow position: | chr17:29825384-29825814 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 277 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 4-351 |
| Cow position: | chr17:17127552-17127189 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 4-401 |
| Cow position: | chr17:1882839-1882440 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 125, 105 |
| Conread position: | 4-419 |
| Cow position: | chr17:452417-451988 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 343 |
| Conread position: | 5-419 |
| Cow position: | chr17:253403-252975 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 119, 318 |
| Conread position: | 18-362 |
| Cow position: | chr17:16050012-16050366 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 18-388 |
| Cow position: | chr17:731920-732305 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 311 |
| Conread position: | 18-391 |
| Cow position: | chr17:137215-136821 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 12, 368 |
| Conread position: | 18-425 |
| Cow position: | chr17:16855525-16855954 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 12, 331 |
| Conread position: | 18-429 |
| Cow position: | chr17:13930462-13930034 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 287 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 20-362 |
| Cow position: | chr17:14030279-14030636 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 104, 271 |
| Conread position: | 20-381 |
| Cow position: | chr17:20233315-20232936 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 162 |
| Conread position: | 20-391 |
| Cow position: | chr17:147499-147108 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 107, 321 |
| Conread position: | 20-391 |
| Cow position: | chr17:33282782-33283153 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 129, 118 |
| Conread position: | 20-419 |
| Cow position: | chr17:8211221-8210807 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 101, 328 |
| Conread position: | 20-419 |
| Cow position: | chr17:15140777-15141180 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 99, 204 |
| Conread position: | 20-419 |
| Cow position: | chr17:18124369-18124775 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 320 |
| Conread position: | 22-401 |
| Cow position: | chr17:16903449-16903057 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 102, 344 |
| Conread position: | 23-389 |
| Cow position: | chr17:4062895-4062519 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 101, 305 |
| Conread position: | 23-419 |
| Cow position: | chr17:21714548-21714149 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 148 |
| Conread position: | 39-419 |
| Cow position: | chr17:24784716-24784325 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 74, 285 |
| Conread position: | 40-419 |
| Cow position: | chr17:14294000-14294392 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 284 |
| Conread position: | 49-429 |
| Cow position: | chr17:20572277-20571897 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 85-421 |
| Cow position: | chr17:19806442-19806783 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 93 |
Show alignments to all cow chromosomes.