Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-131 |
| Cow position: | chr18:40055856-40055725 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1-389 |
| Cow position: | chr18:40483798-40483407 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 143, 188 |
| Conread position: | 1-391 |
| Cow position: | chr18:52655615-52655214 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 120, 209 |
| Conread position: | 1-391 |
| Cow position: | chr18:54032514-54032107 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-392 |
| Cow position: | chr18:28969483-28969888 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 123, 170 |
| Conread position: | 1-392 |
| Cow position: | chr18:36511420-36511019 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 1-399 |
| Cow position: | chr18:16173807-16174215 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 123, 148 |
| Conread position: | 1-401 |
| Cow position: | chr18:23702279-23702693 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 116, 106 |
| Conread position: | 1-401 |
| Cow position: | chr18:29863802-29864218 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 123, 314 |
| Conread position: | 1-403 |
| Cow position: | chr18:16092622-16092203 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-422 |
| Cow position: | chr18:23801826-23801390 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 123, 307 |
| Conread position: | 1-423 |
| Cow position: | chr18:37508768-37508332 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 123, 219 |
| Conread position: | 1-427 |
| Cow position: | chr18:43336217-43336651 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 74 |
| Conread position: | 1-429 |
| Cow position: | chr18:17960173-17960602 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 277 |
| Conread position: | 2-308 |
| Cow position: | chr18:45657401-45657707 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 3-355 |
| Cow position: | chr18:10221831-10221464 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 113, 187 |
| Conread position: | 3-368 |
| Cow position: | chr18:16871074-16870707 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 3-376 |
| Cow position: | chr18:32437301-32437689 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 110, 167 |
| Conread position: | 3-391 |
| Cow position: | chr18:51344906-51344508 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 110, 288 |
| Conread position: | 3-401 |
| Cow position: | chr18:36647974-36647561 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 117, 218 |
| Conread position: | 3-419 |
| Cow position: | chr18:16081327-16080894 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 286 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-419 |
| Cow position: | chr18:32165131-32165556 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 121, 315 |
| Conread position: | 3-419 |
| Cow position: | chr18:51460039-51460469 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 75, 344 |
| Conread position: | 3-419 |
| Cow position: | chr18:52630457-52630875 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 121, 190 |
| Conread position: | 18-223 |
| Cow position: | chr18:27601949-27601736 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 18-309 |
| Cow position: | chr18:54066262-54066562 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 200 |
| Conread position: | 18-391 |
| Cow position: | chr18:36776063-36775673 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 18-422 |
| Cow position: | chr18:5535769-5535360 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 18-429 |
| Cow position: | chr18:51484382-51483956 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 284 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 20-419 |
| Cow position: | chr18:51662934-51662518 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 25-421 |
| Cow position: | chr18:14423049-14422635 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 33-358 |
| Cow position: | chr18:11341195-11340880 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 84 |
| Conread position: | 33-413 |
| Cow position: | chr18:35798110-35798492 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 39-391 |
| Cow position: | chr18:27168400-27168026 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 71, 67 |
| Conread position: | 39-419 |
| Cow position: | chr18:35295944-35295544 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 39-429 |
| Cow position: | chr18:28928825-28929226 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 41-405 |
| Cow position: | chr18:390713-391097 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 197 |
Show alignments to all cow chromosomes.