Cow genome map


           Conread name:
           rlin28_k10.y1
        

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               123, 148
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               95, 291
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               120, 346
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               93, 108
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               280
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               123, 107
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               125, 346
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               1-406
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               110, 106
               

               Conread position:
               1-412
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 18
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               311
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               130, 95
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               16, 123
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               123, 345
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               123, 346
               

               Conread position:
               1-422
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               120, 210
               

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               290
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               99, 247
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               111, 106
               

               Conread position:
               2-419
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               3-322
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-376
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-376
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               272
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               3-406
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               3-407
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 14
               

               Conread position:
               3-417
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               285
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               110, 168
               

               Conread position:
               3-418
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               285
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               110, 168
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               279
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 167
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               110, 379
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               110, 146
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               116, 315
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 288
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               110, 74
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               289
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               110, 183
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               4-392
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               120, 343
               

               Conread position:
               5-391
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               119, 349
               

               Conread position:
               5-401
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               119, 286
               

               Conread position:
               5-419
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               119, 103
               

               Conread position:
               18-401
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 331
               

               Conread position:
               18-401
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               106, 12
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               12, 180
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               106, 232
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               18-419
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               12, 268
               

               Conread position:
               20-344
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               93, 17
               

               Conread position:
               20-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 306
               

               Conread position:
               20-391
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               20-401
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               20-401
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               23-391
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 325
               

               Conread position:
               23-419
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               33-372
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               80, 116
               

               Conread position:
               33-411
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 146
               

               Conread position:
               39-301
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               39-420
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 310
               

               Conread position:
               40-351
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 171
               

               Conread position:
               43-242
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.