Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-338 |
| Cow position: | chr21:149031-148679 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-377 |
| Cow position: | chr21:10853148-10852760 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 123, 217 |
| Conread position: | 1-377 |
| Cow position: | chr21:30564634-30564249 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 345 |
| Conread position: | 1-391 |
| Cow position: | chr21:5020027-5019623 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 123, 67 |
| Conread position: | 1-401 |
| Cow position: | chr21:30596206-30596622 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 120, 221 |
| Conread position: | 1-419 |
| Cow position: | chr21:1195421-1194994 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 123, 265 |
| Conread position: | 1-419 |
| Cow position: | chr21:2878944-2879375 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 123, 308 |
| Conread position: | 1-427 |
| Cow position: | chr21:13112509-13112945 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 123, 287 |
| Conread position: | 2-304 |
| Cow position: | chr21:44874521-44874831 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 2-374 |
| Cow position: | chr21:37086020-37085639 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 15 |
| Conread position: | 3-350 |
| Cow position: | chr21:15398094-15398458 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-357 |
| Cow position: | chr21:19351981-19352351 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-391 |
| Cow position: | chr21:27620614-27621020 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 75, 340 |
| Conread position: | 3-391 |
| Cow position: | chr21:36375869-36375465 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 108, 89 |
| Conread position: | 3-402 |
| Cow position: | chr21:31251878-31251475 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 237 |
| Conread position: | 3-413 |
| Cow position: | chr21:2513728-2513306 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-417 |
| Cow position: | chr21:3805800-3805378 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 3-419 |
| Cow position: | chr21:6966591-6967011 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 111, 317 |
| Conread position: | 3-419 |
| Cow position: | chr21:32397169-32397602 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-419 |
| Cow position: | chr21:37374106-37373675 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-419 |
| Cow position: | chr21:42916673-42916256 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 110, 206 |
| Conread position: | 5-420 |
| Cow position: | chr21:1077163-1076725 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 307 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 77, 326 |
| Conread position: | 18-391 |
| Cow position: | chr21:2665275-2665662 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 23-419 |
| Cow position: | chr21:2419059-2418655 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 123 |
| Conread position: | 33-308 |
| Cow position: | chr21:43641776-43642058 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 33-392 |
| Cow position: | chr21:44763110-44763480 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 88, 311 |
| Conread position: | 39-403 |
| Cow position: | chr21:2538305-2538684 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 44-413 |
| Cow position: | chr21:47972303-47972668 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 100, 146 |
| Conread position: | 44-419 |
| Cow position: | chr21:48529581-48529969 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 80, 284 |
Show alignments to all cow chromosomes.