Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-360 |
| Cow position: | chr22:3434255-3434627 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 106, 363 |
| Conread position: | 1-392 |
| Cow position: | chr22:34171051-34170644 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 123, 107 |
| Conread position: | 1-401 |
| Cow position: | chr22:28784829-28784412 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-419 |
| Cow position: | chr22:1518318-1518751 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 110, 106 |
| Conread position: | 1-419 |
| Cow position: | chr22:31315252-31314817 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 123, 182 |
| Conread position: | 3-401 |
| Cow position: | chr22:37269805-37269393 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 110, 344 |
| Conread position: | 3-403 |
| Cow position: | chr22:324453-324869 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 121, 34 |
| Conread position: | 3-412 |
| Cow position: | chr22:44100633-44101052 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 114, 287 |
| Conread position: | 3-418 |
| Cow position: | chr22:696636-696204 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 113, 168 |
| Conread position: | 3-419 |
| Cow position: | chr22:10907496-10907922 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 110, 74 |
| Conread position: | 3-419 |
| Cow position: | chr22:18029981-18029550 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 121, 104 |
| Conread position: | 3-419 |
| Cow position: | chr22:20238126-20238556 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 110, 344 |
| Conread position: | 3-419 |
| Cow position: | chr22:21193496-21193924 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 3-419 |
| Cow position: | chr22:27307258-27307689 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 287 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 110, 344 |
| Conread position: | 3-419 |
| Cow position: | chr22:35668960-35669389 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 3-419 |
| Cow position: | chr22:43235543-43235123 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 121, 146 |
| Conread position: | 3-419 |
| Cow position: | chr22:45280655-45280220 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 4-366 |
| Cow position: | chr22:46579021-46579390 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 113, 162 |
| Conread position: | 4-399 |
| Cow position: | chr22:16440308-16439911 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 115 |
| Conread position: | 18-391 |
| Cow position: | chr22:19140994-19141382 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 12, 223 |
| Conread position: | 18-406 |
| Cow position: | chr22:18604112-18604509 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 234 |
| Conread position: | 18-419 |
| Cow position: | chr22:15309270-15309676 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 18-419 |
| Cow position: | chr22:41846855-41847271 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 12, 328 |
| Conread position: | 18-425 |
| Cow position: | chr22:11609336-11608913 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 279 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 20-352 |
| Cow position: | chr22:5931395-5931740 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 104, 259 |
| Conread position: | 20-419 |
| Cow position: | chr22:11802358-11802773 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 278 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 20-419 |
| Cow position: | chr22:28997840-28998256 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 21-368 |
| Cow position: | chr22:30676040-30676396 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 92, 128 |
| Conread position: | 21-419 |
| Cow position: | chr22:3275665-3276073 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 103, 75 |
| Conread position: | 22-403 |
| Cow position: | chr22:3759134-3759514 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 25-418 |
| Cow position: | chr22:37536788-37537196 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 99, 182 |
| Conread position: | 34-417 |
| Cow position: | chr22:37997579-37997966 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 39-401 |
| Cow position: | chr22:32205732-32205362 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 85, 201 |
| Conread position: | 39-418 |
| Cow position: | chr22:10620918-10620543 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 41-365 |
| Cow position: | chr22:42491688-42492008 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 42-418 |
| Cow position: | chr22:26105474-26105871 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 82, 312 |
| Conread position: | 42-419 |
| Cow position: | chr22:10933556-10933945 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 249 |
Show alignments to all cow chromosomes.