Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-365 |
| Cow position: | chr24:6199904-6199538 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 1-391 |
| Cow position: | chr24:6412272-6411868 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 123, 89 |
| Conread position: | 1-391 |
| Cow position: | chr24:14759676-14759269 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 123, 283 |
| Conread position: | 1-401 |
| Cow position: | chr24:12088991-12088582 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 123, 285 |
| Conread position: | 1-422 |
| Cow position: | chr24:19885089-19884650 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 3-391 |
| Cow position: | chr24:12208574-12208179 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 111, 180 |
| Conread position: | 3-418 |
| Cow position: | chr24:13235032-13234601 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 3-419 |
| Cow position: | chr24:6326578-6327005 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 3-419 |
| Cow position: | chr24:6440545-6440113 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 3-419 |
| Cow position: | chr24:16081694-16082127 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-419 |
| Cow position: | chr24:19688789-19689217 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 219 |
| Conread position: | 3-419 |
| Cow position: | chr24:20367155-20366726 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 3-419 |
| Cow position: | chr24:21248154-21248587 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 3-424 |
| Cow position: | chr24:6021287-6021722 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 110, 187 |
| Conread position: | 4-340 |
| Cow position: | chr24:12467030-12466685 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 166 |
| Conread position: | 18-401 |
| Cow position: | chr24:23093264-23093665 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 12, 155 |
| Conread position: | 18-401 |
| Cow position: | chr24:23096002-23096403 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 12, 155 |
| Conread position: | 18-424 |
| Cow position: | chr24:6696906-6696509 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 20-360 |
| Cow position: | chr24:6963625-6963269 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 21-385 |
| Cow position: | chr24:12148325-12148703 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 92, 326 |
| Conread position: | 22-419 |
| Cow position: | chr24:33936675-33936281 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 102, 9 |
| Conread position: | 23-418 |
| Cow position: | chr24:17323466-17323054 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 23-419 |
| Cow position: | chr24:12698244-12698657 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 9 |
| Conread position: | 33-416 |
| Cow position: | chr24:145831-146230 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 99, 208 |
| Conread position: | 39-407 |
| Cow position: | chr24:12239614-12239244 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 199-425 |
| Cow position: | chr24:6472664-6472444 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 27, 35 |
Show alignments to all cow chromosomes.