Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-390 |
| Cow position: | chr28:6958981-6958576 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 123, 221 |
| Conread position: | 1-392 |
| Cow position: | chr28:5210870-5210465 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 120, 346 |
| Conread position: | 1-401 |
| Cow position: | chr28:1165137-1165552 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 123, 193 |
| Conread position: | 1-401 |
| Cow position: | chr28:1215082-1215496 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 346 |
| Conread position: | 1-401 |
| Cow position: | chr28:5111970-5112384 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 123, 346 |
| Conread position: | 1-401 |
| Cow position: | chr28:5940234-5939824 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 149 |
| Conread position: | 1-401 |
| Cow position: | chr28:7743890-7743476 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 123, 346 |
| Conread position: | 1-401 |
| Cow position: | chr28:8381795-8381380 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 123, 180 |
| Conread position: | 1-401 |
| Cow position: | chr28:12407465-12407878 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 346 |
| Conread position: | 1-401 |
| Cow position: | chr28:29036896-29037313 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-401 |
| Cow position: | chr28:33255070-33254654 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 123, 86 |
| Conread position: | 1-418 |
| Cow position: | chr28:785414-784982 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 123, 148 |
| Conread position: | 1-419 |
| Cow position: | chr28:17391163-17390728 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-420 |
| Cow position: | chr28:5748958-5749385 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 95, 343 |
| Conread position: | 1-420 |
| Cow position: | chr28:34421426-34421004 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 1-429 |
| Cow position: | chr28:15033330-15033775 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 2-401 |
| Cow position: | chr28:13462711-13462303 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 96, 107 |
| Conread position: | 3-369 |
| Cow position: | chr28:482961-483343 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 3-381 |
| Cow position: | chr28:15604357-15603968 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 3-418 |
| Cow position: | chr28:24591620-24591188 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-419 |
| Cow position: | chr28:1956115-1955685 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 110, 162 |
| Conread position: | 3-419 |
| Cow position: | chr28:7335735-7335306 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 285 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 110, 213 |
| Conread position: | 3-419 |
| Cow position: | chr28:10302586-10302159 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 289 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-419 |
| Cow position: | chr28:22040662-22041076 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 110, 154 |
| Conread position: | 3-419 |
| Cow position: | chr28:23310567-23310989 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-419 |
| Cow position: | chr28:24885607-24885174 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-419 |
| Cow position: | chr28:28470769-28470336 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 283 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 106, 89 |
| Conread position: | 3-419 |
| Cow position: | chr28:34582670-34582237 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 3-424 |
| Cow position: | chr28:22230583-22231018 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 5-419 |
| Cow position: | chr28:15917779-15918207 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 18-392 |
| Cow position: | chr28:18517411-18517803 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 388 |
| Conread position: | 18-401 |
| Cow position: | chr28:10579131-10579525 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 20-364 |
| Cow position: | chr28:8718242-8718598 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 327 |
| Conread position: | 23-401 |
| Cow position: | chr28:30534335-30534730 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 39-418 |
| Cow position: | chr28:1384728-1385112 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 110 |
| Conread position: | 42-391 |
| Cow position: | chr28:10616334-10616698 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 129 |
| Conread position: | 51-419 |
| Cow position: | chr28:9181573-9181189 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 133-418 |
| Cow position: | chr28:933643-933946 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 133-419 |
| Cow position: | chr28:917951-918254 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 93, 43 |
Show alignments to all cow chromosomes.