Cow genome map


           Conread name:
           rlin28_k10.y1
        

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-353
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               123, 281
               

               Conread position:
               1-389
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               272
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               123, 339
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               123, 290
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               123, 342
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               123, 170
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               123, 365
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               120, 291
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               123, 67
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               97, 170
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 170
               

               Conread position:
               1-406
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               120, 342
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               292
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               31, 349
               

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-423
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               77, 187
               

               Conread position:
               1-429
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 342
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 289
               

               Conread position:
               3-376
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               121, 257
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               88, 101
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               110, 93
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               3-417
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 93
               

               Conread position:
               3-418
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 318
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 162
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               287
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 206
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               110, 288
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               128, 110
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 167
               

               Conread position:
               3-419
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               286
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               110, 344
               

               Conread position:
               3-421
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               110, 64
               

               Conread position:
               17-398
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 223
               

               Conread position:
               18-401
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 331
               

               Conread position:
               18-401
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               12, 224
               

               Conread position:
               18-401
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               7, 93
               

               Conread position:
               18-401
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               20-376
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               20-419
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 342
               

               Conread position:
               21-419
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 152
               

               Conread position:
               22-391
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               102, 325
               

               Conread position:
               23-348
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               25-429
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               46-419
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               49-424
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 8
               
Show alignments to all cow chromosomes.