Cow genome map
| Conread name: | rlin28_k10.y1 |
| Conread position: | 1-287 |
| Cow position: | chr8:51062176-51062476 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 1-303 |
| Cow position: | chr8:947707-948017 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 110, 41 |
| Conread position: | 1-373 |
| Cow position: | chr8:12452008-12451620 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-391 |
| Cow position: | chr8:2167563-2167966 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 123, 373 |
| Conread position: | 1-391 |
| Cow position: | chr8:3333986-3333576 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1-401 |
| Cow position: | chr8:4689353-4688938 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 123, 76 |
| Conread position: | 1-401 |
| Cow position: | chr8:5019962-5019550 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 120, 16 |
| Conread position: | 1-401 |
| Cow position: | chr8:49285109-49285524 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 111, 97 |
| Conread position: | 1-412 |
| Cow position: | chr8:38393590-38393160 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 1-419 |
| Cow position: | chr8:19333529-19333097 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 289 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 111, 106 |
| Conread position: | 1-423 |
| Cow position: | chr8:38044176-38044613 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 41 |
| Conread position: | 1-423 |
| Cow position: | chr8:42486862-42486428 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 123, 226 |
| Conread position: | 1-425 |
| Cow position: | chr8:44240736-44241172 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 123, 240 |
| Conread position: | 2-401 |
| Cow position: | chr8:33591312-33590917 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 109, 105 |
| Conread position: | 3-363 |
| Cow position: | chr8:1346012-1346380 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 3-369 |
| Cow position: | chr8:1110144-1109768 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 3-391 |
| Cow position: | chr8:30489974-30490379 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 3-412 |
| Cow position: | chr8:32629059-32629478 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 115, 236 |
| Conread position: | 3-418 |
| Cow position: | chr8:21154395-21154823 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 281 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-419 |
| Cow position: | chr8:1151331-1151749 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 248 |
| Conread position: | 3-419 |
| Cow position: | chr8:1321970-1321546 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 3-419 |
| Cow position: | chr8:1501331-1501749 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-419 |
| Cow position: | chr8:6062541-6062949 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 254, 106 |
| Conread position: | 3-419 |
| Cow position: | chr8:6465829-6465397 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 3-419 |
| Cow position: | chr8:8553766-8554192 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 110, 340 |
| Conread position: | 3-419 |
| Cow position: | chr8:9738473-9738057 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 110, 161 |
| Conread position: | 3-419 |
| Cow position: | chr8:12446455-12446880 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 110, 287 |
| Conread position: | 3-419 |
| Cow position: | chr8:14258037-14257607 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 62, 282 |
| Conread position: | 3-419 |
| Cow position: | chr8:14630276-14630709 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 115, 288 |
| Conread position: | 3-419 |
| Cow position: | chr8:17382160-17382591 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 99, 345 |
| Conread position: | 3-419 |
| Cow position: | chr8:18403374-18403807 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 3-419 |
| Cow position: | chr8:22569344-22569778 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 3-419 |
| Cow position: | chr8:32434894-32435323 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-419 |
| Cow position: | chr8:35128843-35129276 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 3-419 |
| Cow position: | chr8:42318317-42318749 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 3-419 |
| Cow position: | chr8:50431190-50431624 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 110, 168 |
| Conread position: | 3-422 |
| Cow position: | chr8:30157055-30156624 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 110, 334 |
| Conread position: | 3-422 |
| Cow position: | chr8:56588513-56588943 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 203, 48 |
| Conread position: | 5-419 |
| Cow position: | chr8:11835483-11835052 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 17-421 |
| Cow position: | chr8:41970121-41970541 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 235 |
| Conread position: | 18-204 |
| Cow position: | chr8:41919385-41919573 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 18-305 |
| Cow position: | chr8:27653345-27653622 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 35 |
| Conread position: | 18-401 |
| Cow position: | chr8:23773575-23773176 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 18-401 |
| Cow position: | chr8:25773699-25774102 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 18-406 |
| Cow position: | chr8:49219883-49219474 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 18-419 |
| Cow position: | chr8:8228461-8228868 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 20-386 |
| Cow position: | chr8:27154193-27154576 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 204 |
| Conread position: | 20-401 |
| Cow position: | chr8:14925952-14926339 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 203 |
| Conread position: | 20-419 |
| Cow position: | chr8:4273206-4272797 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 88 |
| Conread position: | 20-419 |
| Cow position: | chr8:10751278-10750867 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 279 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 93, 76 |
| Conread position: | 35-420 |
| Cow position: | chr8:49385981-49385602 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 222 |
| Conread position: | 41-203 |
| Cow position: | chr8:11794949-11794779 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 41-429 |
| Cow position: | chr8:47920568-47920968 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 144 |
| Conread position: | 51-391 |
| Cow position: | chr8:6492597-6492943 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 169 |
Show alignments to all cow chromosomes.