Non-Coding RNA Search

Cow genome map


           Conread name:
           rlin31_o24.y1
        

               Conread position:
               1-128
               

               Cow position:
               chr17:13124935-13124796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr17:8644838-8644986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               1-153
               

               Cow position:
               chr17:36533462-36533617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr17:16117628-16117460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr17:21039079-21039243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr17:43527781-43527942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr17:3387095-3387258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               1-170
               

               Cow position:
               chr17:25078192-25078024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               151, 42
               

               Conread position:
               1-176
               

               Cow position:
               chr17:3182783-3182601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               1-176
               

               Cow position:
               chr17:22781493-22781675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               1-177
               

               Cow position:
               chr17:3498863-3498679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               1-177
               

               Cow position:
               chr17:35372015-35371840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               1-192
               

               Cow position:
               chr17:21031589-21031782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr17:3042280-3042478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               1-197
               

               Cow position:
               chr17:11056574-11056366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-197
               

               Cow position:
               chr17:21017595-21017801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               1-197
               

               Cow position:
               chr17:32651417-32651624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-205
               

               Cow position:
               chr17:19455502-19455299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               1-206
               

               Cow position:
               chr17:4606771-4606970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               91, 69
               

               Conread position:
               1-219
               

               Cow position:
               chr17:31232129-31231904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr17:44924374-44924154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               1-233
               

               Cow position:
               chr17:41393912-41393671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               1-239
               

               Cow position:
               chr17:12216276-12216033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 213
               

               Conread position:
               1-240
               

               Cow position:
               chr17:27679443-27679186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 188
               

               Conread position:
               1-242
               

               Cow position:
               chr17:33121889-33122145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-243
               

               Cow position:
               chr17:1295770-1295517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-243
               

               Cow position:
               chr17:5246697-5246948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               1-244
               

               Cow position:
               chr17:27765082-27765328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               1-245
               

               Cow position:
               chr17:21620515-21620769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 216
               

               Conread position:
               1-249
               

               Cow position:
               chr17:5896109-5895857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               1-258
               

               Cow position:
               chr17:27305960-27306229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr17:33291009-33290741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-259
               

               Cow position:
               chr17:3471222-3471489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-259
               

               Cow position:
               chr17:15132964-15133215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               1-260
               

               Cow position:
               chr17:24549973-24550248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-261
               

               Cow position:
               chr17:9778052-9778315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               1-263
               

               Cow position:
               chr17:10649650-10649904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 169
               

               Conread position:
               1-265
               

               Cow position:
               chr17:11296436-11296725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr17:20839757-20839488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               1-268
               

               Cow position:
               chr17:1783805-1783526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               77, 163
               

               Conread position:
               1-268
               

               Cow position:
               chr17:5733647-5733389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               1-268
               

               Cow position:
               chr17:27697891-27697619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               1-272
               

               Cow position:
               chr17:6624059-6624339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 180
               

               Conread position:
               1-275
               

               Cow position:
               chr17:12059289-12059003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-278
               

               Cow position:
               chr17:20870292-20870006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               1-284
               

               Cow position:
               chr17:34316907-34316619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               1-291
               

               Cow position:
               chr17:13940521-13940217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               20, 191
               

               Conread position:
               1-291
               

               Cow position:
               chr17:20083711-20083417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               1-291
               

               Cow position:
               chr17:23803269-23803565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               1-293
               

               Cow position:
               chr17:18490334-18490647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               20, 57
               

               Conread position:
               1-293
               

               Cow position:
               chr17:24752493-24752214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 13
               

               Conread position:
               1-296
               

               Cow position:
               chr17:7132654-7132329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-298
               

               Cow position:
               chr17:1275320-1275635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 256
               

               Conread position:
               1-298
               

               Cow position:
               chr17:25542011-25541705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 134
               

               Conread position:
               1-300
               

               Cow position:
               chr17:7436967-7437281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               1-300
               

               Cow position:
               chr17:10446717-10447023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               1-300
               

               Cow position:
               chr17:10528940-10528614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-300
               

               Cow position:
               chr17:20800617-20800927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               1-300
               

               Cow position:
               chr17:23063512-23063833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               10, 202
               

               Conread position:
               1-300
               

               Cow position:
               chr17:25796539-25796223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-300
               

               Cow position:
               chr17:26818651-26818344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-300
               

               Cow position:
               chr17:34079297-34078997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               1-300
               

               Cow position:
               chr17:37163726-37163417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 204
               

               Conread position:
               1-300
               

               Cow position:
               chr17:39771197-39771513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               1-304
               

               Cow position:
               chr17:8279906-8279590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 212
               

               Conread position:
               1-304
               

               Cow position:
               chr17:8544111-8544424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               1-304
               

               Cow position:
               chr17:14050392-14050089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               1-304
               

               Cow position:
               chr17:18824590-18824904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 273
               

               Conread position:
               1-304
               

               Cow position:
               chr17:21335897-21335574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-304
               

               Cow position:
               chr17:21739083-21738756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-304
               

               Cow position:
               chr17:26084836-26085142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               1-305
               

               Cow position:
               chr17:11281306-11280981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 46
               

               Conread position:
               1-306
               

               Cow position:
               chr17:38646869-38647181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 18
               

               Conread position:
               1-307
               

               Cow position:
               chr17:20090820-20090516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               1-308
               

               Cow position:
               chr17:1568375-1568052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 204
               

               Conread position:
               1-308
               

               Cow position:
               chr17:11101993-11101685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               1-308
               

               Cow position:
               chr17:12289614-12289287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 145
               

               Conread position:
               1-308
               

               Cow position:
               chr17:18720647-18720325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               1-311
               

               Cow position:
               chr17:32027661-32027327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 274
               

               Conread position:
               1-312
               

               Cow position:
               chr17:17121479-17121797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               1-312
               

               Cow position:
               chr17:30529735-30529419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               1-312
               

               Cow position:
               chr17:30665074-30665398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-312
               

               Cow position:
               chr17:31481245-31480912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 195
               

               Conread position:
               1-315
               

               Cow position:
               chr17:39012519-39012847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 269
               

               Conread position:
               1-317
               

               Cow position:
               chr17:31231313-31230993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               1-321
               

               Cow position:
               chr17:9565110-9565435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               18, 168
               

               Conread position:
               1-321
               

               Cow position:
               chr17:36331165-36330824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               1-322
               

               Cow position:
               chr17:5224204-5224534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               1-322
               

               Cow position:
               chr17:18472980-18473298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               77, 160
               

               Conread position:
               1-322
               

               Cow position:
               chr17:33288853-33288522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               1-323
               

               Cow position:
               chr17:22806737-22806407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 162
               

               Conread position:
               1-323
               

               Cow position:
               chr17:36275158-36275469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               1-324
               

               Cow position:
               chr17:11216082-11215757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               1-324
               

               Cow position:
               chr17:24004195-24004508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               1-324
               

               Cow position:
               chr17:24883763-24883434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               1-325
               

               Cow position:
               chr17:1061261-1060908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               1-325
               

               Cow position:
               chr17:1410440-1410100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 329
               

               Conread position:
               1-325
               

               Cow position:
               chr17:5000773-5000450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 181
               

               Conread position:
               1-325
               

               Cow position:
               chr17:5006690-5006350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 181
               

               Conread position:
               1-325
               

               Cow position:
               chr17:5423270-5422931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr17:5767715-5768042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 176
               

               Conread position:
               1-325
               

               Cow position:
               chr17:7697857-7698185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 144
               

               Conread position:
               1-325
               

               Cow position:
               chr17:8079118-8079450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               1-325
               

               Cow position:
               chr17:8690639-8690314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               1-325
               

               Cow position:
               chr17:9746322-9746650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 97
               

               Conread position:
               1-325
               

               Cow position:
               chr17:9853787-9854114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 159
               

               Conread position:
               1-325
               

               Cow position:
               chr17:11156692-11156356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 178
               

               Conread position:
               1-325
               

               Cow position:
               chr17:11618381-11618721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               1-325
               

               Cow position:
               chr17:14848722-14848408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               20, 121
               

               Conread position:
               1-325
               

               Cow position:
               chr17:15103087-15102756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 151
               

               Conread position:
               1-325
               

               Cow position:
               chr17:15340928-15340614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 11
               

               Conread position:
               1-325
               

               Cow position:
               chr17:15684306-15684648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               24, 331
               

               Conread position:
               1-325
               

               Cow position:
               chr17:17405939-17406273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 156
               

               Conread position:
               1-325
               

               Cow position:
               chr17:18592240-18592580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 162
               

               Conread position:
               1-325
               

               Cow position:
               chr17:20022716-20022376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 329
               

               Conread position:
               1-325
               

               Cow position:
               chr17:20157418-20157745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 140
               

               Conread position:
               1-325
               

               Cow position:
               chr17:20780313-20780653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 329
               

               Conread position:
               1-325
               

               Cow position:
               chr17:20848332-20848660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr17:20993238-20992904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               1-325
               

               Cow position:
               chr17:21115147-21114816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 64
               

               Conread position:
               1-325
               

               Cow position:
               chr17:21243985-21243652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr17:21495178-21495509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               1-325
               

               Cow position:
               chr17:21755640-21755297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               16, 332
               

               Conread position:
               1-325
               

               Cow position:
               chr17:23101410-23101081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 139
               

               Conread position:
               1-325
               

               Cow position:
               chr17:23246013-23246336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 268
               

               Conread position:
               1-325
               

               Cow position:
               chr17:24580498-24580157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr17:24587419-24587762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 332
               

               Conread position:
               1-325
               

               Cow position:
               chr17:25032671-25032344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               21, 101
               

               Conread position:
               1-325
               

               Cow position:
               chr17:25097264-25097593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr17:25128548-25128215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               1-325
               

               Cow position:
               chr17:26764815-26765161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               18, 190
               

               Conread position:
               1-325
               

               Cow position:
               chr17:27142557-27142883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 188
               

               Conread position:
               1-325
               

               Cow position:
               chr17:27429379-27429703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               1-325
               

               Cow position:
               chr17:29084008-29084312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               263, 18
               

               Conread position:
               1-325
               

               Cow position:
               chr17:32138599-32138286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               1-325
               

               Cow position:
               chr17:32273881-32273549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               1-325
               

               Cow position:
               chr17:32419317-32418978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 183
               

               Conread position:
               1-325
               

               Cow position:
               chr17:32471990-32471643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               1-325
               

               Cow position:
               chr17:33052664-33052989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               17, 193
               

               Conread position:
               1-325
               

               Cow position:
               chr17:33792983-33793301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 112
               

               Conread position:
               1-325
               

               Cow position:
               chr17:35126515-35126842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               1-325
               

               Cow position:
               chr17:38832843-38833181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 262
               

               Conread position:
               1-325
               

               Cow position:
               chr17:39735987-39736312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr17:40331570-40331902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               1-325
               

               Cow position:
               chr17:40771631-40771968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 275
               

               Conread position:
               2-183
               

               Cow position:
               chr17:20129480-20129657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               2-191
               

               Cow position:
               chr17:19756098-19755902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 126
               

               Conread position:
               2-196
               

               Cow position:
               chr17:2079562-2079765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 184
               

               Conread position:
               2-241
               

               Cow position:
               chr17:966937-966694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               20, 179
               

               Conread position:
               2-243
               

               Cow position:
               chr17:242437-242692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               2-243
               

               Cow position:
               chr17:42347419-42347170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               2-245
               

               Cow position:
               chr17:16307182-16307431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               2-251
               

               Cow position:
               chr17:13143888-13143626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               2-267
               

               Cow position:
               chr17:2034347-2034607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               2-280
               

               Cow position:
               chr17:33271877-33271589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 62
               

               Conread position:
               2-289
               

               Cow position:
               chr17:7648022-7648316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               2-296
               

               Cow position:
               chr17:21628284-21628588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               2-299
               

               Cow position:
               chr17:4225689-4225387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               2-300
               

               Cow position:
               chr17:21599880-21599569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               2-300
               

               Cow position:
               chr17:24490323-24490655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-300
               

               Cow position:
               chr17:38614758-38615074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-311
               

               Cow position:
               chr17:11172813-11172490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               2-312
               

               Cow position:
               chr17:32279105-32278781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 184
               

               Conread position:
               2-321
               

               Cow position:
               chr17:14026113-14025776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               2-322
               

               Cow position:
               chr17:18109284-18108952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 324
               

               Conread position:
               2-324
               

               Cow position:
               chr17:11664786-11664446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               2-324
               

               Cow position:
               chr17:20932138-20932468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               2-324
               

               Cow position:
               chr17:22563985-22564321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               19, 289
               

               Conread position:
               2-325
               

               Cow position:
               chr17:4213557-4213881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               2-325
               

               Cow position:
               chr17:7810937-7810617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 151
               

               Conread position:
               2-325
               

               Cow position:
               chr17:12325944-12325627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               2-325
               

               Cow position:
               chr17:24553806-24554134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 161
               

               Conread position:
               2-325
               

               Cow position:
               chr17:24787219-24786886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               2-325
               

               Cow position:
               chr17:25901001-25901338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               2-325
               

               Cow position:
               chr17:29715384-29715067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               19, 141
               

               Conread position:
               2-325
               

               Cow position:
               chr17:40312523-40312843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 174
               

               Conread position:
               2-325
               

               Cow position:
               chr17:43717508-43717198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               76, 166
               

               Conread position:
               3-172
               

               Cow position:
               chr17:4721290-4721470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               3-197
               

               Cow position:
               chr17:25740753-25740957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               3-262
               

               Cow position:
               chr17:20835396-20835654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               3-267
               

               Cow position:
               chr17:15333908-15333632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               3-267
               

               Cow position:
               chr17:33999241-33998974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               3-293
               

               Cow position:
               chr17:5514562-5514867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               3-294
               

               Cow position:
               chr17:18860913-18860613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 86
               

               Conread position:
               3-311
               

               Cow position:
               chr17:15664472-15664802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               3-312
               

               Cow position:
               chr17:21293242-21292918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               18, 221
               

               Conread position:
               3-325
               

               Cow position:
               chr17:9117446-9117782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 325
               

               Conread position:
               3-325
               

               Cow position:
               chr17:9911566-9911895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               3-325
               

               Cow position:
               chr17:21004028-21003692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 319
               

               Conread position:
               3-325
               

               Cow position:
               chr17:30713156-30713481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               4-190
               

               Cow position:
               chr17:5041871-5041684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               4-192
               

               Cow position:
               chr17:18884542-18884336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-233
               

               Cow position:
               chr17:35311225-35311471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               4-267
               

               Cow position:
               chr17:5688543-5688283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               4-299
               

               Cow position:
               chr17:28285221-28284915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 163
               

               Conread position:
               4-300
               

               Cow position:
               chr17:12108608-12108918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               4-324
               

               Cow position:
               chr17:30718615-30718281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 186
               

               Conread position:
               4-325
               

               Cow position:
               chr17:21973326-21972992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               78, 323
               

               Conread position:
               4-325
               

               Cow position:
               chr17:24824056-24824380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               5-176
               

               Cow position:
               chr17:32554217-32554041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               5-192
               

               Cow position:
               chr17:27667385-27667188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               5-196
               

               Cow position:
               chr17:25141265-25141450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 120
               

               Conread position:
               5-202
               

               Cow position:
               chr17:4436422-4436223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               5-239
               

               Cow position:
               chr17:32950077-32950325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               17, 231
               

               Conread position:
               5-242
               

               Cow position:
               chr17:26881532-26881278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               5-254
               

               Cow position:
               chr17:21207330-21207076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 135
               

               Conread position:
               5-266
               

               Cow position:
               chr17:12447593-12447324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               5-290
               

               Cow position:
               chr17:32366090-32366391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 172
               

               Conread position:
               5-293
               

               Cow position:
               chr17:25815417-25815711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               191, 64
               

               Conread position:
               5-303
               

               Cow position:
               chr17:28539842-28540145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               5-311
               

               Cow position:
               chr17:17060877-17060557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               5-312
               

               Cow position:
               chr17:6566276-6566607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 153
               

               Conread position:
               5-312
               

               Cow position:
               chr17:43141908-43141583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               64, 158
               

               Conread position:
               5-315
               

               Cow position:
               chr17:3781850-3782172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 164
               

               Conread position:
               5-321
               

               Cow position:
               chr17:25999921-26000251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 270
               

               Conread position:
               5-324
               

               Cow position:
               chr17:13922280-13922626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 336
               

               Conread position:
               5-325
               

               Cow position:
               chr17:18495705-18495382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               5-325
               

               Cow position:
               chr17:20072270-20071961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               5-325
               

               Cow position:
               chr17:21680576-21680917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 135
               

               Conread position:
               5-325
               

               Cow position:
               chr17:27047971-27048293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               5-325
               

               Cow position:
               chr17:29292562-29292244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 196
               

               Conread position:
               5-325
               

               Cow position:
               chr17:30539442-30539132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               5-325
               

               Cow position:
               chr17:41029758-41030076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 240
               

               Conread position:
               6-115
               

               Cow position:
               chr17:23517362-23517246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               6-168
               

               Cow position:
               chr17:3518446-3518277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               6-243
               

               Cow position:
               chr17:21697538-21697785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               13, 223
               

               Conread position:
               6-262
               

               Cow position:
               chr17:3306673-3306931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 210
               

               Conread position:
               6-262
               

               Cow position:
               chr17:44232914-44232639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               6-269
               

               Cow position:
               chr17:41290212-41289942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               6-271
               

               Cow position:
               chr17:21312999-21312727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               6-303
               

               Cow position:
               chr17:34595745-34596057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 143
               

               Conread position:
               6-304
               

               Cow position:
               chr17:923688-923997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               6-308
               

               Cow position:
               chr17:25189085-25189407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 250
               

               Conread position:
               6-322
               

               Cow position:
               chr17:24973757-24974080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 204
               

               Conread position:
               6-324
               

               Cow position:
               chr17:40421474-40421808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               6-325
               

               Cow position:
               chr17:3503397-3503719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 10
               

               Conread position:
               6-325
               

               Cow position:
               chr17:40289195-40288862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               44, 188
               

               Conread position:
               7-233
               

               Cow position:
               chr17:20358685-20358910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               7-257
               

               Cow position:
               chr17:20215978-20216236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               7-280
               

               Cow position:
               chr17:4601741-4601451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               14, 172
               

               Conread position:
               7-311
               

               Cow position:
               chr17:37480186-37479877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 175
               

               Conread position:
               7-312
               

               Cow position:
               chr17:1035789-1035471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               7-323
               

               Cow position:
               chr17:24821677-24821997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               7-325
               

               Cow position:
               chr17:20126426-20126734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               7-325
               

               Cow position:
               chr17:29356415-29356102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 7
               

               Conread position:
               8-206
               

               Cow position:
               chr17:43633937-43634121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               184, 11
               

               Conread position:
               8-312
               

               Cow position:
               chr17:26230747-26231080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               8-325
               

               Cow position:
               chr17:25611905-25612228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 11
               

               Conread position:
               9-325
               

               Cow position:
               chr17:24773492-24773817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 119
               

               Conread position:
               12-231
               

               Cow position:
               chr17:4824306-4824531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               12-325
               

               Cow position:
               chr17:5900193-5900507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               162, 60
               

               Conread position:
               16-325
               

               Cow position:
               chr17:908565-908878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 98
               

               Conread position:
               16-325
               

               Cow position:
               chr17:29157237-29157554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 138
               

               Conread position:
               17-135
               

               Cow position:
               chr17:20269422-20269544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               17-253
               

               Cow position:
               chr17:34208000-34207751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               17-304
               

               Cow position:
               chr17:5730743-5731034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               17-308
               

               Cow position:
               chr17:3577358-3577661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               61, 202
               

               Conread position:
               17-324
               

               Cow position:
               chr17:6423580-6423901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 52
               

               Conread position:
               17-325
               

               Cow position:
               chr17:9697881-9697544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               17-325
               

               Cow position:
               chr17:12536648-12536327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 310
               

               Conread position:
               17-325
               

               Cow position:
               chr17:32989312-32989614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 53
               

               Conread position:
               17-325
               

               Cow position:
               chr17:32993794-32993486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               17-325
               

               Cow position:
               chr17:33933917-33933605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 58
               

               Conread position:
               18-225
               

               Cow position:
               chr17:3442847-3442642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 159
               

               Conread position:
               18-298
               

               Cow position:
               chr17:8837128-8836836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               18-325
               

               Cow position:
               chr17:33275925-33275612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               63, 126
               

               Conread position:
               19-245
               

               Cow position:
               chr17:13672254-13672016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 230
               

               Conread position:
               19-325
               

               Cow position:
               chr17:1063011-1063310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 93
               

               Conread position:
               20-245
               

               Cow position:
               chr17:12270092-12269860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               20-308
               

               Cow position:
               chr17:12929720-12929409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               20-325
               

               Cow position:
               chr17:12590986-12591312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 315
               

               Conread position:
               21-325
               

               Cow position:
               chr17:36790963-36791264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               49, 65
               

               Conread position:
               22-300
               

               Cow position:
               chr17:24149002-24149298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               22-325
               

               Cow position:
               chr17:10459111-10458794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 306
               

               Conread position:
               23-322
               

               Cow position:
               chr17:3467595-3467887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               55, 131
               

               Conread position:
               24-325
               

               Cow position:
               chr17:20990367-20990052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               25-243
               

               Cow position:
               chr17:30734451-30734240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               89, 41
               

               Conread position:
               25-325
               

               Cow position:
               chr17:1634654-1634354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               28-322
               

               Cow position:
               chr17:22032863-22032560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 185
               

               Conread position:
               29-300
               

               Cow position:
               chr17:21918042-21917759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               49, 216
               

               Conread position:
               29-325
               

               Cow position:
               chr17:30359310-30359596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               30-267
               

               Cow position:
               chr17:38363141-38362905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               163, 57
               

               Conread position:
               31-260
               

               Cow position:
               chr17:10510828-10510586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               31-324
               

               Cow position:
               chr17:17683064-17682774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               32-324
               

               Cow position:
               chr17:979318-979030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 217
               

               Conread position:
               33-303
               

               Cow position:
               chr17:21959847-21959571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               33-325
               

               Cow position:
               chr17:4106150-4105856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 111
               

               Conread position:
               33-325
               

               Cow position:
               chr17:4121886-4121592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 111
               

               Conread position:
               34-258
               

               Cow position:
               chr17:44147139-44146905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               35-259
               

               Cow position:
               chr17:21298062-21298302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 209
               

               Conread position:
               35-321
               

               Cow position:
               chr17:7142702-7142995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 144
               

               Conread position:
               35-325
               

               Cow position:
               chr17:27058715-27058419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               36-267
               

               Cow position:
               chr17:25916731-25916973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               37-321
               

               Cow position:
               chr17:17410132-17410427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 288
               

               Conread position:
               39-320
               

               Cow position:
               chr17:11962707-11962401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               39, 274
               

               Conread position:
               40-308
               

               Cow position:
               chr17:4967953-4968234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               40, 122
               

               Conread position:
               41-197
               

               Cow position:
               chr17:38613090-38613251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               41-223
               

               Cow position:
               chr17:20928754-20928946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 162
               

               Conread position:
               41-279
               

               Cow position:
               chr17:10020955-10020698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               41-292
               

               Cow position:
               chr17:18146026-18146291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               41-292
               

               Cow position:
               chr17:31701281-31701537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 161
               

               Conread position:
               41-325
               

               Cow position:
               chr17:1562930-1562649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               37, 144
               

               Conread position:
               41-325
               

               Cow position:
               chr17:28467980-28468260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               42-248
               

               Cow position:
               chr17:1353241-1353456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               42-325
               

               Cow position:
               chr17:13244186-13243912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               135, 45
               

               Conread position:
               43-308
               

               Cow position:
               chr17:14762273-14762000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               43-308
               

               Cow position:
               chr17:24559145-24559412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               45-203
               

               Cow position:
               chr17:484451-484607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               45-266
               

               Cow position:
               chr17:267736-267508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               45-325
               

               Cow position:
               chr17:31037532-31037239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 282
               

               Conread position:
               46-231
               

               Cow position:
               chr17:5382137-5381952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               49-300
               

               Cow position:
               chr17:25117742-25117998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               49-312
               

               Cow position:
               chr17:14003669-14003951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               50-325
               

               Cow position:
               chr17:6328961-6329252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 281
               

               Conread position:
               51-325
               

               Cow position:
               chr17:20874249-20874534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               56-300
               

               Cow position:
               chr17:24928338-24928589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               56-325
               

               Cow position:
               chr17:30728385-30728642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               58-312
               

               Cow position:
               chr17:553092-552844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               60-305
               

               Cow position:
               chr17:39857260-39857509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 118
               

               Conread position:
               62-304
               

               Cow position:
               chr17:14060906-14060656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               67-312
               

               Cow position:
               chr17:20884397-20884649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               71-315
               

               Cow position:
               chr17:7136860-7137107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               76-300
               

               Cow position:
               chr17:26233943-26233716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               76-300
               

               Cow position:
               chr17:40673269-40673484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               47, 93
               

               Conread position:
               76-304
               

               Cow position:
               chr17:31856546-31856791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               76-312
               

               Cow position:
               chr17:1113768-1114014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               76-312
               

               Cow position:
               chr17:32280552-32280791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 17
               

               Conread position:
               76-321
               

               Cow position:
               chr17:1040629-1040879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 243
               

               Conread position:
               76-325
               

               Cow position:
               chr17:6318974-6318729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               133, 65
               

               Conread position:
               76-325
               

               Cow position:
               chr17:6848688-6848932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               76-325
               

               Cow position:
               chr17:32348957-32349205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               105, 45
               

               Conread position:
               77-325
               

               Cow position:
               chr17:25616145-25616387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               191, 15
               

               Conread position:
               78-323
               

               Cow position:
               chr17:23563904-23563659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               186, 25
               

               Conread position:
               78-323
               

               Cow position:
               chr17:33658185-33657933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               121, 237
               

               Conread position:
               78-324
               

               Cow position:
               chr17:25501995-25502247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               114, 242
               

               Conread position:
               82-325
               

               Cow position:
               chr17:11215340-11215094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               40, 60
               

               Conread position:
               82-325
               

               Cow position:
               chr17:21758257-21758003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 243
               

               Conread position:
               84-303
               

               Cow position:
               chr17:4300029-4299813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               111, 55
               

               Conread position:
               84-325
               

               Cow position:
               chr17:11832228-11831977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               85-239
               

               Cow position:
               chr17:2839800-2839959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               87-322
               

               Cow position:
               chr17:35339021-35338786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               179, 118
               

               Conread position:
               89-325
               

               Cow position:
               chr17:34751509-34751268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               103, 230
               

               Conread position:
               90-312
               

               Cow position:
               chr17:10561527-10561760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               90-317
               

               Cow position:
               chr17:32009540-32009312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               91-321
               

               Cow position:
               chr17:23798179-23798414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               91-325
               

               Cow position:
               chr17:21325231-21325470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               112, 90
               

               Conread position:
               91-325
               

               Cow position:
               chr17:32017979-32017754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               179, 7
               

               Conread position:
               92-300
               

               Cow position:
               chr17:14652881-14652666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               93-325
               

               Cow position:
               chr17:35573663-35573890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               176, 48
               

               Conread position:
               93-325
               

               Cow position:
               chr17:40250326-40250558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               94-325
               

               Cow position:
               chr17:3353782-3354020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 104
               

               Conread position:
               95-325
               

               Cow position:
               chr17:25514221-25513985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 225
               

               Conread position:
               97-323
               

               Cow position:
               chr17:36864535-36864766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               80, 112
               

               Conread position:
               98-323
               

               Cow position:
               chr17:23517037-23516806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               97, 222
               

               Conread position:
               98-325
               

               Cow position:
               chr17:27203139-27202908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               25, 217
               

               Conread position:
               101-324
               

               Cow position:
               chr17:21489716-21489488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 144
               

               Conread position:
               106-312
               

               Cow position:
               chr17:25342827-25342615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               109-323
               

               Cow position:
               chr17:23883340-23883133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               155, 64
               

               Conread position:
               113-325
               

               Cow position:
               chr17:9824589-9824807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               80, 207
               

               Conread position:
               115-325
               

               Cow position:
               chr17:40406366-40406582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               88, 118
               

               Conread position:
               116-319
               

               Cow position:
               chr17:3371558-3371748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               116-325
               

               Cow position:
               chr17:2275398-2275608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               68, 79
               

               Conread position:
               116-325
               

               Cow position:
               chr17:10432053-10431836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               83, 203
               

               Conread position:
               116-325
               

               Cow position:
               chr17:11368927-11368712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               120-303
               

               Cow position:
               chr17:21478995-21478805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               120-325
               

               Cow position:
               chr17:12511048-12510841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               16, 169
               

               Conread position:
               122-322
               

               Cow position:
               chr17:21806520-21806317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               122-325
               

               Cow position:
               chr17:3153642-3153437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 59
               

               Conread position:
               122-325
               

               Cow position:
               chr17:22057093-22056890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               124-325
               

               Cow position:
               chr17:40638881-40639084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               72, 186
               

               Conread position:
               127-305
               

               Cow position:
               chr17:24750851-24751033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               136, 120
               

               Conread position:
               128-325
               

               Cow position:
               chr17:1025885-1025687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               139, 66
               

               Conread position:
               128-325
               

               Cow position:
               chr17:34791131-34790926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               78, 194
               

               Conread position:
               134-325
               

               Cow position:
               chr17:5372588-5372389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               68, 188
               

               Conread position:
               134-325
               

               Cow position:
               chr17:22017147-22016951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 163
               

               Conread position:
               136-325
               

               Cow position:
               chr17:7590514-7590325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               129, 18
               

               Conread position:
               136-325
               

               Cow position:
               chr17:16158434-16158629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 184
               

               Conread position:
               142-324
               

               Cow position:
               chr17:22051643-22051453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 180
               

               Conread position:
               142-325
               

               Cow position:
               chr17:32333143-32332953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 179
               

               Conread position:
               142-325
               

               Cow position:
               chr17:39606379-39606568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               144-324
               

               Cow position:
               chr17:25126303-25126487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               66, 174
               

               Conread position:
               145-325
               

               Cow position:
               chr17:18934209-18934397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               145-325
               

               Cow position:
               chr17:21039516-21039695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               119, 18
               

               Conread position:
               150-325
               

               Cow position:
               chr17:25800925-25800745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 168
               

               Conread position:
               155-321
               

               Cow position:
               chr17:17044371-17044198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 166
               

               Conread position:
               159-325
               

               Cow position:
               chr17:11306186-11306347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               160-325
               

               Cow position:
               chr17:3388792-3388961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               166-323
               

               Cow position:
               chr17:33164844-33164683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               166-325
               

               Cow position:
               chr17:18767020-18766856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 153
               

               Conread position:
               166-325
               

               Cow position:
               chr17:29995465-29995298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               31, 156
               

               Conread position:
               191-312
               

               Cow position:
               chr17:32192850-32192727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               191-325
               

               Cow position:
               chr17:12019539-12019411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               193-325
               

               Cow position:
               chr17:27440181-27440311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               210-325
               

               Cow position:
               chr17:11478790-11478907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               54, 106
               
Show alignments to all cow chromosomes.
Conread position:	1-128
Cow position:	chr17:13124935-13124796 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	111
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	20, 0
Conread position:	1-139
Cow position:	chr17:8644838-8644986 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	120
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	20, 48
Conread position:	1-153
Cow position:	chr17:36533462-36533617 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	121
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	20, 0
Conread position:	1-155
Cow position:	chr17:16117628-16117460 (view UCSC Genome Browser custom track)
Alignm length:	169
Alignm identity:	135
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	11, 0
Conread position:	1-157
Cow position:	chr17:21039079-21039243 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	120
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	77, 0
Conread position:	1-163
Cow position:	chr17:3387095-3387258 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	135
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	16, 41
Conread position:	1-170
Cow position:	chr17:25078192-25078024 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	138
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	151, 42
Conread position:	1-176
Cow position:	chr17:3182783-3182601 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	151
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	21, 10
Conread position:	1-177
Cow position:	chr17:3498863-3498679 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	141
Alignm E-value:	9e-29
Alignm gaps (pig, cow):	21, 100
Conread position:	1-192
Cow position:	chr17:21031589-21031782 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	142
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	79, 0
Conread position:	1-197
Cow position:	chr17:3042280-3042478 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	139
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	22, 91
Conread position:	1-205
Cow position:	chr17:19455502-19455299 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	146
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	20, 45
Conread position:	1-206
Cow position:	chr17:4606771-4606970 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	156
Alignm E-value:	6e-35
Alignm gaps (pig, cow):	91, 69
Conread position:	1-219
Cow position:	chr17:31232129-31231904 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	158
Alignm E-value:	9e-29
Alignm gaps (pig, cow):	21, 0
Conread position:	1-226
Cow position:	chr17:44924374-44924154 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	161
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	20, 69
Conread position:	1-233
Cow position:	chr17:41393912-41393671 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	163
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	18, 134
Conread position:	1-239
Cow position:	chr17:12216276-12216033 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	190
Alignm E-value:	9.99967e-42
Alignm gaps (pig, cow):	20, 213
Conread position:	1-240
Cow position:	chr17:27679443-27679186 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	191
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	20, 188
Conread position:	1-242
Cow position:	chr17:33121889-33122145 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	177
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	20, 10
Conread position:	1-243
Cow position:	chr17:1295770-1295517 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	195
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 0