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Cow genome map

           
Conread name:
           
rlin31_o24.y1
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr18:46135048-46135178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr18:8967726-8967868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr18:11695008-11695152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr18:56163315-56163473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr18:11811707-11811865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr18:45395729-45395896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr18:21721552-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr18:5711940-5711766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr18:50700393-50700581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr18:4624701-4624514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:5646978-5647169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:27388277-27388474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:32860376-32860565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr18:49543206-49543405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr18:24342353-24342548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr18:35058069-35058270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr18:36445160-36445370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:29387955-29388159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:33272673-33272882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 144
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr18:47868183-47868441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:6290512-6290763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:11166707-11166961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:18562810-18562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:26286641-26286884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:49161728-49161456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:39709618-39709866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 158
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:56150928-56150662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr18:17334688-17334434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 203
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:9806138-9806411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 231
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:10861690-10861436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr18:35797353-35797618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr18:9557709-9557976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 187
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr18:22092509-22092771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr18:35636622-35636343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:7486980-7487254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 173
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:51712981-51712698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 251
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:56361874-56361599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:4649007-4648737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr18:11831866-11832143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr18:268083-267789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:13172795-13172499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 181
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:43950573-43950859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:4369052-4368742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 175
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:39002067-39001768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:2592445-2592128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 281
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:3027637-3027320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:4749155-4748842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 181
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:7965991-7966282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:9029346-9029650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:12776045-12775744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:49200368-49200673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:52637801-52637489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 221
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:55552693-55553007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 204
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:29958418-29958121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:32773607-32773923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:51656325-51655998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:40758944-40759252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:20271292-20270966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 296
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:25206464-25206140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
17, 241
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:11322317-11322648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:14586748-14586418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 221
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:16044426-16044099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:17004978-17005312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:20127374-20127053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:20174402-20174077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:55498794-55499123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr18:56159193-56159513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr18:3166760-3166431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr18:36458662-36458990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 268
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:13359790-13360114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:19273374-19273036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
67, 110
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:7649722-7650046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:10904574-10904911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:38985415-38985760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 337
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr18:33157549-33157879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr18:38686823-38687142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:42747324-42747651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:47511722-47512069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:2849533-2849205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:3133014-3132706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:3416900-3417222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:3422448-3422761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:4182462-4182124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:4540144-4539818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:4666483-4666153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:4884787-4884456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:5766157-5766477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:6881610-6881291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:7359462-7359809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 198
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:9007877-9008189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:9089433-9089763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:9365640-9365985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 334
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:10575840-10576175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:10656174-10656503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:10954202-10954530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 212
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:11684718-11685046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:11691682-11691345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 188
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:11867079-11867404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 21
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:12113639-12113301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:15172761-15173077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
22, 145
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:15614120-15613796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:18340229-18339885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:18919225-18918896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:19193621-19193301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:20641757-20641432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:21103031-21102712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:21192682-21192350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:21195611-21195271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 149
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:25282827-25282490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 326
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:28924104-28923783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:30360392-30360085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:30794162-30794490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 201
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:31672779-31672449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:37002357-37002696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 328
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:37023828-37023486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:38606964-38607285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:39875531-39875196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:44802155-44801825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:45104718-45104374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:47183556-47183229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 209
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:49655443-49655750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:50637735-50637409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 171
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:51211910-51212247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:51691740-51691398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 160
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:55001011-55000678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 137
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:55119602-55119939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:55397042-55397363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:55789264-55788932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 189
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:56181727-56181392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr18:48407518-48407704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr18:47931131-47930940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr18:47314565-47314363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr18:52382427-52382630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr18:51412103-51412306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr18:23808144-23807919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr18:4316036-4316280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr18:16847427-16847670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr18:13632222-13631970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr18:81488-81736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr18:33606361-33606621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr18:48453422-48453688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr18:44549178-44548902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:51406174-51405873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:51827027-51827314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
79, 142
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr18:4628761-4629080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:5486980-5487282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:8964268-8964555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr18:24957025-24957338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr18:39662514-39662830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr18:22121153-22120833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 198
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr18:23424658-23424970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr18:7950842-7951169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr18:3180149-3180471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 183
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr18:50381986-50382308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr18:44484029-44483711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr18:6309809-6310145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr18:34527373-34527032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 188
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr18:45904163-45903834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 179
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:12242019-12242338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:29648515-29648847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:46048490-46048816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:49100639-49100304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 197
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chr18:20797834-20797997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr18:23447352-23447140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 178
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr18:43563957-43564197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr18:14048443-14048729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr18:30248396-30248101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:14815605-14815304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:12058747-12059061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:28101358-28101696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 260
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:29759781-29760091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:33158693-33159006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:45570751-45571076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
4-251
               

               
Cow position:
               
chr18:26937463-26937711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr18:52632673-52632418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr18:5578033-5578359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 257
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr18:23766685-23766347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:22214218-22214552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:56183671-56183999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 165
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr18:54646222-54646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr18:49665420-49665254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr18:4529253-4529420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr18:32244280-32244110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 70
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr18:43463672-43463483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr18:13293244-13293442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr18:41270822-41271061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr18:3098579-3098345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr18:33793440-33793693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 163
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr18:46437020-46436760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr18:33407345-33407640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr18:8105209-8104914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:19645910-19646215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr18:3044164-3044494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 276
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr18:21175914-21176239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr18:10891262-10891576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr18:46453146-46452816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 171
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:7952378-7952701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:11779401-11779717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
199, 57
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:12118109-12117788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:15881123-15880775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:19619683-19620006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 157
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:28658179-28657847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 321
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:29058761-29058437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 235
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:44262358-44262694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:46727328-46727652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
16, 168
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:50082513-50082193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr18:55461975-55461645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
12, 305
               

               
Conread position:
               
6-158
               

               
Cow position:
               
chr18:1733459-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
6-171
               

               
Cow position:
               
chr18:16184693-16184527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr18:56168186-56167989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr18:31562658-31562458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 141
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr18:24946077-24945824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr18:32121329-32121067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr18:16417964-16417689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
6-307
               

               
Cow position:
               
chr18:6610124-6609810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr18:7955878-7956196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr18:11618214-11618516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr18:51443695-51443391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr18:52635349-52635022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr18:45961527-45961219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr18:37382361-37382033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr18:29796692-29796366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 317
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr18:38344536-38344868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:13507999-13507677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr18:21768360-21768678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr18:29356897-29356560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 326
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr18:33299630-33299968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 112
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr18:47517476-47517140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr18:19159231-19159041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr18:2774855-2774601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr18:3115193-3115493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
14, 195
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr18:9974592-9974265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 207
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr18:25647516-25647184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 291
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr18:42432348-42432025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr18:55692558-55692879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr18:4381030-4381357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
9-325
               

               
Cow position:
               
chr18:10322536-10322870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
12, 185
               

               
Conread position:
               
10-321
               

               
Cow position:
               
chr18:19850014-19849697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
10-325
               

               
Cow position:
               
chr18:48713292-48713615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 312
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chr18:9818583-9818764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
17-197
               

               
Cow position:
               
chr18:36097947-36098134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
17-231
               

               
Cow position:
               
chr18:7058977-7059190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
17-243
               

               
Cow position:
               
chr18:35582355-35582117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr18:22056107-22055829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
17-315
               

               
Cow position:
               
chr18:20126048-20126360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
17-325
               

               
Cow position:
               
chr18:9010478-9010772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 40
               

               
Conread position:
               
17-325
               

               
Cow position:
               
chr18:12023886-12023574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 214
               

               
Conread position:
               
17-325
               

               
Cow position:
               
chr18:26938730-26939047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
19-242
               

               
Cow position:
               
chr18:17670053-17669826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
19-325
               

               
Cow position:
               
chr18:4496139-4495822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 306
               

               
Conread position:
               
20-323
               

               
Cow position:
               
chr18:11183691-11184002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 182
               

               
Conread position:
               
22-257
               

               
Cow position:
               
chr18:21205118-21205358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
22-296
               

               
Cow position:
               
chr18:32883053-32883340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
22-325
               

               
Cow position:
               
chr18:36230959-36230662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
182, 33
               

               
Conread position:
               
23-176
               

               
Cow position:
               
chr18:2354647-2354809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 160
               

               
Conread position:
               
23-267
               

               
Cow position:
               
chr18:20482121-20481878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
26-266
               

               
Cow position:
               
chr18:12809615-12809858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
53, 189
               

               
Conread position:
               
26-325
               

               
Cow position:
               
chr18:11790694-11790985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
137, 46
               

               
Conread position:
               
26-325
               

               
Cow position:
               
chr18:47828585-47828882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
27-158
               

               
Cow position:
               
chr18:24636271-24636400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
27-299
               

               
Cow position:
               
chr18:3018322-3018047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
27-321
               

               
Cow position:
               
chr18:52854822-52855115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
27-323
               

               
Cow position:
               
chr18:33007813-33008128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 276
               

               
Conread position:
               
28-323
               

               
Cow position:
               
chr18:17391216-17390932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 56
               

               
Conread position:
               
31-197
               

               
Cow position:
               
chr18:28823208-28823036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
31-253
               

               
Cow position:
               
chr18:42966615-42966856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 231
               

               
Conread position:
               
31-324
               

               
Cow position:
               
chr18:18592233-18592536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
31-325
               

               
Cow position:
               
chr18:247923-247631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 185
               

               
Conread position:
               
31-325
               

               
Cow position:
               
chr18:52877145-52877425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
236, 23
               

               
Conread position:
               
34-325
               

               
Cow position:
               
chr18:42479828-42479522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 295
               

               
Conread position:
               
36-244
               

               
Cow position:
               
chr18:15340674-15340463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
138, 51
               

               
Conread position:
               
36-299
               

               
Cow position:
               
chr18:48829021-48828738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
39-312
               

               
Cow position:
               
chr18:2864230-2863938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
41-269
               

               
Cow position:
               
chr18:219103-219345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 233
               

               
Conread position:
               
45-325
               

               
Cow position:
               
chr18:10977436-10977147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
45-325
               

               
Cow position:
               
chr18:33896648-33896354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
46-325
               

               
Cow position:
               
chr18:42431829-42431547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
47-259
               

               
Cow position:
               
chr18:14085238-14085461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
49-192
               

               
Cow position:
               
chr18:18815894-18815747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
49-301
               

               
Cow position:
               
chr18:39434602-39434867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
53-263
               

               
Cow position:
               
chr18:54056341-54056550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
53-321
               

               
Cow position:
               
chr18:5189909-5189633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
56-267
               

               
Cow position:
               
chr18:6103313-6103093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr18:45637608-45637352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
61-310
               

               
Cow position:
               
chr18:7415233-7414978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
63-296
               

               
Cow position:
               
chr18:47812266-47812505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
67-201
               

               
Cow position:
               
chr18:15810109-15809975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
71-325
               

               
Cow position:
               
chr18:16686532-16686271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 250
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr18:4602201-4601978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
76-197
               

               
Cow position:
               
chr18:35419620-35419741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-210
               

               
Cow position:
               
chr18:18868557-18868692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
76-300
               

               
Cow position:
               
chr18:7108935-7109170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr18:3211681-3211926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
76-323
               

               
Cow position:
               
chr18:8299823-8300079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 225
               

               
Conread position:
               
76-324
               

               
Cow position:
               
chr18:1399542-1399292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 185
               

               
Conread position:
               
76-324
               

               
Cow position:
               
chr18:18369553-18369298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
123, 245
               

               
Conread position:
               
76-325
               

               
Cow position:
               
chr18:1954780-1954525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
76-325
               

               
Cow position:
               
chr18:19896646-19896387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 248
               

               
Conread position:
               
76-325
               

               
Cow position:
               
chr18:27109487-27109228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 248
               

               
Conread position:
               
76-325
               

               
Cow position:
               
chr18:30341366-30341120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
76-325
               

               
Cow position:
               
chr18:48451862-48452135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 175
               

               
Conread position:
               
76-325
               

               
Cow position:
               
chr18:55505216-55505468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 211
               

               
Conread position:
               
81-322
               

               
Cow position:
               
chr18:36201811-36201568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
113, 49
               

               
Conread position:
               
82-325
               

               
Cow position:
               
chr18:51190775-51190535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 75
               

               
Conread position:
               
87-324
               

               
Cow position:
               
chr18:28930809-28930573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr18:21740989-21740751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
179, 118
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr18:43555704-43555460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 230
               

               
Conread position:
               
89-325
               

               
Cow position:
               
chr18:9066521-9066766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
90-300
               

               
Cow position:
               
chr18:40268869-40268660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
91-300
               

               
Cow position:
               
chr18:4330779-4331001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
94-304
               

               
Cow position:
               
chr18:50974468-50974250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
94-314
               

               
Cow position:
               
chr18:22275008-22274787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
96-323
               

               
Cow position:
               
chr18:8171255-8171023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
96-325
               

               
Cow position:
               
chr18:30586390-30586161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
97-312
               

               
Cow position:
               
chr18:51850729-51850512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
97-325
               

               
Cow position:
               
chr18:48633623-48633840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
99-304
               

               
Cow position:
               
chr18:31125388-31125184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 79
               

               
Conread position:
               
106-265
               

               
Cow position:
               
chr18:29991679-29991508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
106-325
               

               
Cow position:
               
chr18:11577928-11578138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
156, 63
               

               
Conread position:
               
107-325
               

               
Cow position:
               
chr18:3370739-3370964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
109-325
               

               
Cow position:
               
chr18:1571394-1571173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 143
               

               
Conread position:
               
110-325
               

               
Cow position:
               
chr18:20462850-20462630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr18:19687864-19688072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
114-296
               

               
Cow position:
               
chr18:50095546-50095364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
115-308
               

               
Cow position:
               
chr18:46135591-46135789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
115-315
               

               
Cow position:
               
chr18:51643517-51643310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
116-312
               

               
Cow position:
               
chr18:16997102-16997306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
116-325
               

               
Cow position:
               
chr18:5632115-5632331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 206
               

               
Conread position:
               
116-325
               

               
Cow position:
               
chr18:36264916-36264708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
116-325
               

               
Cow position:
               
chr18:51594952-51594740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
119-325
               

               
Cow position:
               
chr18:54130481-54130264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 206
               

               
Conread position:
               
121-311
               

               
Cow position:
               
chr18:4556311-4556118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
121-312
               

               
Cow position:
               
chr18:35873932-35874130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
121-325
               

               
Cow position:
               
chr18:24266555-24266344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 201
               

               
Conread position:
               
121-325
               

               
Cow position:
               
chr18:49038316-49038526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
122-325
               

               
Cow position:
               
chr18:48242045-48242256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 200
               

               
Conread position:
               
123-325
               

               
Cow position:
               
chr18:4204064-4203866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
126-312
               

               
Cow position:
               
chr18:7076815-7077007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr18:49660013-49659822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
126-324
               

               
Cow position:
               
chr18:49841138-49841340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 144
               

               
Conread position:
               
126-325
               

               
Cow position:
               
chr18:42751752-42751539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
127-324
               

               
Cow position:
               
chr18:3085654-3085453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 90
               

               
Conread position:
               
127-325
               

               
Cow position:
               
chr18:25006628-25006429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 81
               

               
Conread position:
               
127-325
               

               
Cow position:
               
chr18:36768944-36768747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
160, 72
               

               
Conread position:
               
128-300
               

               
Cow position:
               
chr18:23623771-23623593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
134-325
               

               
Cow position:
               
chr18:31711698-31711497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
137-325
               

               
Cow position:
               
chr18:23630730-23630543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
141-325
               

               
Cow position:
               
chr18:4871948-4872127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 22
               

               
Conread position:
               
142-325
               

               
Cow position:
               
chr18:34834366-34834556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
143-312
               

               
Cow position:
               
chr18:23162769-23162938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 107
               

               
Conread position:
               
144-267
               

               
Cow position:
               
chr18:52403094-52402963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
147-325
               

               
Cow position:
               
chr18:2146705-2146515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chr18:52406584-52406756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
154-325
               

               
Cow position:
               
chr18:4535128-4534959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
154-325
               

               
Cow position:
               
chr18:41950104-41950266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
155-324
               

               
Cow position:
               
chr18:43797065-43796892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 160
               

               
Conread position:
               
161-325
               

               
Cow position:
               
chr18:35367292-35367131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
162-312
               

               
Cow position:
               
chr18:49015023-49015177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
162-325
               

               
Cow position:
               
chr18:49324528-49324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
164-325
               

               
Cow position:
               
chr18:17660660-17660496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
170-325
               

               
Cow position:
               
chr18:22569164-22569002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 151
               

               
Conread position:
               
179-325
               

               
Cow position:
               
chr18:23505244-23505395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
194-325
               

               
Cow position:
               
chr18:50359264-50359396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
208-325
               

               
Cow position:
               
chr18:2773447-2773328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
208-325
               

               
Cow position:
               
chr18:2776950-2776831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 108
               

               
Conread position:
               
208-325
               

               
Cow position:
               
chr18:21081946-21081828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
208-325
               

               
Cow position:
               
chr18:52649402-52649283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
215-325
               

               
Cow position:
               
chr18:50632490-50632378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 101
               
Show alignments to all cow chromosomes.