Non-Coding RNA Search

Cow genome map


           Conread name:
           rlin31_o24.y1
        

               Conread position:
               1-132
               

               Cow position:
               chr25:9842758-9842900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 46
               

               Conread position:
               1-165
               

               Cow position:
               chr25:24136677-24136506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr25:2110841-2111008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               1-168
               

               Cow position:
               chr25:18490830-18491007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr25:24168140-24167969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               1-176
               

               Cow position:
               chr25:17702205-17702030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               1-178
               

               Cow position:
               chr25:12195567-12195385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               1-178
               

               Cow position:
               chr25:40658058-40658244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               1-187
               

               Cow position:
               chr25:17712292-17712488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr25:12204228-12204431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr25:33839146-33839340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               1-197
               

               Cow position:
               chr25:6424827-6424626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 147
               

               Conread position:
               1-197
               

               Cow position:
               chr25:10365994-10365791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               22, 176
               

               Conread position:
               1-206
               

               Cow position:
               chr25:8347267-8347479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               1-213
               

               Cow position:
               chr25:20060273-20060052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 193
               

               Conread position:
               1-239
               

               Cow position:
               chr25:4002554-4002809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-239
               

               Cow position:
               chr25:8918520-8918269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               1-243
               

               Cow position:
               chr25:5514765-5515025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-243
               

               Cow position:
               chr25:9961420-9961162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 224
               

               Conread position:
               1-243
               

               Cow position:
               chr25:10330636-10330401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               1-243
               

               Cow position:
               chr25:12824256-12824006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               1-243
               

               Cow position:
               chr25:13642558-13642301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-243
               

               Cow position:
               chr25:36026765-36027012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               18, 206
               

               Conread position:
               1-244
               

               Cow position:
               chr25:16400492-16400261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 64
               

               Conread position:
               1-244
               

               Cow position:
               chr25:26058343-26058597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 170
               

               Conread position:
               1-245
               

               Cow position:
               chr25:6470462-6470201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-253
               

               Cow position:
               chr25:20211328-20211059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 137
               

               Conread position:
               1-253
               

               Cow position:
               chr25:31732978-31732713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               1-263
               

               Cow position:
               chr25:2046796-2046529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               1-264
               

               Cow position:
               chr25:6891762-6891503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               1-264
               

               Cow position:
               chr25:7800894-7801173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 159
               

               Conread position:
               1-267
               

               Cow position:
               chr25:1735558-1735285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               20, 134
               

               Conread position:
               1-267
               

               Cow position:
               chr25:6886219-6885936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               1-267
               

               Cow position:
               chr25:9957274-9957003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               1-267
               

               Cow position:
               chr25:11666414-11666683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 166
               

               Conread position:
               1-267
               

               Cow position:
               chr25:36535674-36535398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               1-268
               

               Cow position:
               chr25:41132597-41132325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-273
               

               Cow position:
               chr25:21193185-21192886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 255
               

               Conread position:
               1-279
               

               Cow position:
               chr25:20394961-20395241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               1-284
               

               Cow position:
               chr25:5837208-5836902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               1-289
               

               Cow position:
               chr25:2194705-2194991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               1-290
               

               Cow position:
               chr25:40388696-40388408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               1-291
               

               Cow position:
               chr25:30319691-30319392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 242
               

               Conread position:
               1-292
               

               Cow position:
               chr25:18487432-18487731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               1-293
               

               Cow position:
               chr25:17566345-17566651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-293
               

               Cow position:
               chr25:25754238-25753932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-293
               

               Cow position:
               chr25:31230465-31230178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               1-294
               

               Cow position:
               chr25:32191429-32191725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               26, 160
               

               Conread position:
               1-295
               

               Cow position:
               chr25:12081557-12081256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               49, 40
               

               Conread position:
               1-299
               

               Cow position:
               chr25:21266764-21267064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 176
               

               Conread position:
               1-300
               

               Cow position:
               chr25:10407660-10407343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 170
               

               Conread position:
               1-304
               

               Cow position:
               chr25:20069478-20069789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 188
               

               Conread position:
               1-304
               

               Cow position:
               chr25:24008419-24008122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 183
               

               Conread position:
               1-307
               

               Cow position:
               chr25:16922036-16921719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               17, 155
               

               Conread position:
               1-308
               

               Cow position:
               chr25:1837998-1838320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-310
               

               Cow position:
               chr25:11131343-11131665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 18
               

               Conread position:
               1-311
               

               Cow position:
               chr25:20076252-20076579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-312
               

               Cow position:
               chr25:5847048-5846726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 129
               

               Conread position:
               1-312
               

               Cow position:
               chr25:9269131-9269426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               1-312
               

               Cow position:
               chr25:13569409-13569094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               1-312
               

               Cow position:
               chr25:17658373-17658694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-312
               

               Cow position:
               chr25:40321534-40321205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-315
               

               Cow position:
               chr25:22297259-22296940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               1-316
               

               Cow position:
               chr25:11830138-11829836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 139
               

               Conread position:
               1-321
               

               Cow position:
               chr25:16064655-16064983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-322
               

               Cow position:
               chr25:11662061-11661726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               1-322
               

               Cow position:
               chr25:18293515-18293837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-322
               

               Cow position:
               chr25:33691312-33691650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 171
               

               Conread position:
               1-323
               

               Cow position:
               chr25:5407508-5407835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               1-323
               

               Cow position:
               chr25:21209190-21208877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               1-323
               

               Cow position:
               chr25:23829359-23829036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 124
               

               Conread position:
               1-324
               

               Cow position:
               chr25:3992548-3992873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               21, 149
               

               Conread position:
               1-324
               

               Cow position:
               chr25:6226799-6227129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 113
               

               Conread position:
               1-324
               

               Cow position:
               chr25:11437044-11436713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               1-324
               

               Cow position:
               chr25:16319374-16319046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 143
               

               Conread position:
               1-324
               

               Cow position:
               chr25:17975609-17975284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 168
               

               Conread position:
               1-324
               

               Cow position:
               chr25:35344796-35345104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               20, 126
               

               Conread position:
               1-325
               

               Cow position:
               chr25:4547962-4547623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 182
               

               Conread position:
               1-325
               

               Cow position:
               chr25:5756455-5756779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 163
               

               Conread position:
               1-325
               

               Cow position:
               chr25:7216586-7216919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               1-325
               

               Cow position:
               chr25:7306056-7306387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 215
               

               Conread position:
               1-325
               

               Cow position:
               chr25:7581669-7581332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr25:9990332-9990015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 145
               

               Conread position:
               1-325
               

               Cow position:
               chr25:10643552-10643214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 176
               

               Conread position:
               1-325
               

               Cow position:
               chr25:11585276-11585613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 134
               

               Conread position:
               1-325
               

               Cow position:
               chr25:12117228-12116904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               62, 164
               

               Conread position:
               1-325
               

               Cow position:
               chr25:14833895-14833566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 93
               

               Conread position:
               1-325
               

               Cow position:
               chr25:15714639-15714968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 139
               

               Conread position:
               1-325
               

               Cow position:
               chr25:16866990-16867336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr25:18721346-18721025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr25:19679100-19679450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 146
               

               Conread position:
               1-325
               

               Cow position:
               chr25:20785823-20785493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               1-325
               

               Cow position:
               chr25:21191245-21191584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 149
               

               Conread position:
               1-325
               

               Cow position:
               chr25:21245848-21245509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr25:24669672-24669354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               1-325
               

               Cow position:
               chr25:25051626-25051282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               1-325
               

               Cow position:
               chr25:36037022-36036684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 177
               

               Conread position:
               1-325
               

               Cow position:
               chr25:38957736-38958050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               2-144
               

               Cow position:
               chr25:28920652-28920801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-178
               

               Cow position:
               chr25:18448596-18448782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 130
               

               Conread position:
               2-192
               

               Cow position:
               chr25:10137857-10138047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               20, 125
               

               Conread position:
               2-257
               

               Cow position:
               chr25:23410422-23410693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               2-267
               

               Cow position:
               chr25:6464270-6463994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               2-273
               

               Cow position:
               chr25:38972592-38972869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               2-285
               

               Cow position:
               chr25:13333182-13333462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 212
               

               Conread position:
               2-291
               

               Cow position:
               chr25:24405977-24405671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               2-298
               

               Cow position:
               chr25:18988135-18988459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-300
               

               Cow position:
               chr25:3145605-3145915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               2-300
               

               Cow position:
               chr25:20348617-20348940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 183
               

               Conread position:
               2-300
               

               Cow position:
               chr25:21289099-21289416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               17, 184
               

               Conread position:
               2-300
               

               Cow position:
               chr25:33959501-33959181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               2-315
               

               Cow position:
               chr25:14117868-14118177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               2-321
               

               Cow position:
               chr25:15377092-15377417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               2-322
               

               Cow position:
               chr25:15273449-15273765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 146
               

               Conread position:
               2-324
               

               Cow position:
               chr25:788028-788353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               2-324
               

               Cow position:
               chr25:22314960-22315299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 158
               

               Conread position:
               2-325
               

               Cow position:
               chr25:14791511-14791849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 327
               

               Conread position:
               2-325
               

               Cow position:
               chr25:15254572-15254253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               2-325
               

               Cow position:
               chr25:22531046-22531376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               2-325
               

               Cow position:
               chr25:26087274-26087616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 331
               

               Conread position:
               2-325
               

               Cow position:
               chr25:26238630-26238957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 185
               

               Conread position:
               2-325
               

               Cow position:
               chr25:27531508-27531176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 96
               

               Conread position:
               2-325
               

               Cow position:
               chr25:30279445-30279113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               76, 111
               

               Conread position:
               2-325
               

               Cow position:
               chr25:33550265-33550606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               3-267
               

               Cow position:
               chr25:22203930-22203654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 181
               

               Conread position:
               3-308
               

               Cow position:
               chr25:21950886-21951209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               3-324
               

               Cow position:
               chr25:7641693-7641356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               3-325
               

               Cow position:
               chr25:19478452-19478770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               75, 13
               

               Conread position:
               4-177
               

               Cow position:
               chr25:10746661-10746839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 140
               

               Conread position:
               4-229
               

               Cow position:
               chr25:15694745-15694979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 175
               

               Conread position:
               4-230
               

               Cow position:
               chr25:7329305-7329547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 166
               

               Conread position:
               4-300
               

               Cow position:
               chr25:18294552-18294243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 179
               

               Conread position:
               4-320
               

               Cow position:
               chr25:19129615-19129944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 317
               

               Conread position:
               4-325
               

               Cow position:
               chr25:20460884-20461197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 177
               

               Conread position:
               4-325
               

               Cow position:
               chr25:26523740-26524051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               5-151
               

               Cow position:
               chr25:18935112-18934957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               5-212
               

               Cow position:
               chr25:15286778-15286565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               16, 144
               

               Conread position:
               5-243
               

               Cow position:
               chr25:16001758-16001514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               5-244
               

               Cow position:
               chr25:35625408-35625172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               5-251
               

               Cow position:
               chr25:5792042-5791781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 189
               

               Conread position:
               5-285
               

               Cow position:
               chr25:12097604-12097896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               5-296
               

               Cow position:
               chr25:38425131-38425428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               5-305
               

               Cow position:
               chr25:24452407-24452084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 292
               

               Conread position:
               5-312
               

               Cow position:
               chr25:38135510-38135833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               5-318
               

               Cow position:
               chr25:35347666-35347993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 216
               

               Conread position:
               5-321
               

               Cow position:
               chr25:20023628-20023295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 326
               

               Conread position:
               5-322
               

               Cow position:
               chr25:21895124-21894793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 289
               

               Conread position:
               5-324
               

               Cow position:
               chr25:12778770-12778447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 147
               

               Conread position:
               5-325
               

               Cow position:
               chr25:61422-61745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               73, 164
               

               Conread position:
               5-325
               

               Cow position:
               chr25:2136116-2136445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 256
               

               Conread position:
               5-325
               

               Cow position:
               chr25:36081635-36081970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 250
               

               Conread position:
               6-183
               

               Cow position:
               chr25:35607961-35607775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 158
               

               Conread position:
               6-243
               

               Cow position:
               chr25:35340095-35340341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               6-263
               

               Cow position:
               chr25:15319683-15319951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               13, 168
               

               Conread position:
               6-266
               

               Cow position:
               chr25:36779258-36779535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               6-304
               

               Cow position:
               chr25:14512878-14513190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 238
               

               Conread position:
               6-311
               

               Cow position:
               chr25:10504572-10504259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               15, 168
               

               Conread position:
               6-312
               

               Cow position:
               chr25:18564261-18564569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               6-312
               

               Cow position:
               chr25:26654669-26654990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 92
               

               Conread position:
               6-323
               

               Cow position:
               chr25:28188186-28187852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 230
               

               Conread position:
               6-325
               

               Cow position:
               chr25:8120539-8120875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               16, 187
               

               Conread position:
               7-197
               

               Cow position:
               chr25:26112038-26112229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               7-197
               

               Cow position:
               chr25:40957223-40957026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               7-230
               

               Cow position:
               chr25:11978931-11978709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 15
               

               Conread position:
               7-255
               

               Cow position:
               chr25:9642118-9642381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               7-273
               

               Cow position:
               chr25:14266740-14266477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 147
               

               Conread position:
               7-293
               

               Cow position:
               chr25:20402956-20402645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               7-324
               

               Cow position:
               chr25:26700802-26701120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               7-325
               

               Cow position:
               chr25:12840954-12840623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               7-325
               

               Cow position:
               chr25:36746682-36746355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               14, 153
               

               Conread position:
               8-160
               

               Cow position:
               chr25:16316662-16316818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               8-261
               

               Cow position:
               chr25:2414595-2414844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               8-263
               

               Cow position:
               chr25:25827231-25827502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               8-300
               

               Cow position:
               chr25:27868572-27868881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 81
               

               Conread position:
               8-311
               

               Cow position:
               chr25:6474334-6474005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 129
               

               Conread position:
               8-321
               

               Cow position:
               chr25:41387752-41387436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               8-325
               

               Cow position:
               chr25:4522054-4521746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               8-325
               

               Cow position:
               chr25:20007912-20008228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               9-197
               

               Cow position:
               chr25:6256172-6255975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               9-300
               

               Cow position:
               chr25:26133807-26134114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               9-325
               

               Cow position:
               chr25:6683295-6682967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 101
               

               Conread position:
               11-303
               

               Cow position:
               chr25:30462519-30462234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 58
               

               Conread position:
               12-181
               

               Cow position:
               chr25:2595949-2596131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               16-261
               

               Cow position:
               chr25:9754308-9754067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               101, 31
               

               Conread position:
               17-192
               

               Cow position:
               chr25:41364202-41364029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               17-264
               

               Cow position:
               chr25:35332942-35333190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 58
               

               Conread position:
               17-267
               

               Cow position:
               chr25:12239371-12239112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               17-294
               

               Cow position:
               chr25:36033213-36033496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               61, 246
               

               Conread position:
               17-312
               

               Cow position:
               chr25:12817149-12817448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               61, 124
               

               Conread position:
               17-324
               

               Cow position:
               chr25:6961373-6961059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               17-325
               

               Cow position:
               chr25:34169731-34170041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               61, 124
               

               Conread position:
               19-325
               

               Cow position:
               chr25:10218272-10217955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               23, 308
               

               Conread position:
               22-225
               

               Cow position:
               chr25:12899537-12899752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               23-325
               

               Cow position:
               chr25:7007699-7008007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               23-325
               

               Cow position:
               chr25:26090029-26089718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               24-324
               

               Cow position:
               chr25:2624588-2624889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               25-325
               

               Cow position:
               chr25:12319553-12319258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               181, 72
               

               Conread position:
               25-325
               

               Cow position:
               chr25:38981895-38982188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               26-322
               

               Cow position:
               chr25:34768934-34768640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               154, 63
               

               Conread position:
               31-244
               

               Cow position:
               chr25:13736520-13736301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 125
               

               Conread position:
               32-259
               

               Cow position:
               chr25:26270142-26269910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 125
               

               Conread position:
               34-301
               

               Cow position:
               chr25:16714480-16714197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 151
               

               Conread position:
               34-325
               

               Cow position:
               chr25:13272363-13272664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               34-325
               

               Cow position:
               chr25:22178715-22179011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               40, 147
               

               Conread position:
               35-304
               

               Cow position:
               chr25:17144227-17144503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               157, 32
               

               Conread position:
               35-305
               

               Cow position:
               chr25:8157715-8157432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 235
               

               Conread position:
               36-234
               

               Cow position:
               chr25:12521166-12520962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               5, 99
               

               Conread position:
               36-325
               

               Cow position:
               chr25:13294702-13294971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               39-229
               

               Cow position:
               chr25:33267529-33267723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 17
               

               Conread position:
               41-300
               

               Cow position:
               chr25:17914581-17914851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 158
               

               Conread position:
               41-304
               

               Cow position:
               chr25:27801091-27801353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               41-325
               

               Cow position:
               chr25:20133514-20133220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 285
               

               Conread position:
               42-325
               

               Cow position:
               chr25:17704551-17704839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               36, 136
               

               Conread position:
               43-325
               

               Cow position:
               chr25:22241794-22242058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               44-253
               

               Cow position:
               chr25:21042191-21042407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               155, 73
               

               Conread position:
               44-312
               

               Cow position:
               chr25:25861556-25861267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               45-257
               

               Cow position:
               chr25:12755686-12755462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               47-278
               

               Cow position:
               chr25:13672195-13672444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               47-325
               

               Cow position:
               chr25:14720559-14720839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               48-300
               

               Cow position:
               chr25:17342257-17342529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               54-325
               

               Cow position:
               chr25:13443586-13443315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               138, 42
               

               Conread position:
               57-325
               

               Cow position:
               chr25:17190927-17190652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               62-324
               

               Cow position:
               chr25:7673106-7673395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               79, 279
               

               Conread position:
               62-324
               

               Cow position:
               chr25:21893163-21893432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 44
               

               Conread position:
               67-312
               

               Cow position:
               chr25:36017370-36017616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               131, 15
               

               Conread position:
               69-253
               

               Cow position:
               chr25:31732501-31732315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               124, 29
               

               Conread position:
               75-325
               

               Cow position:
               chr25:22751173-22750912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 250
               

               Conread position:
               76-291
               

               Cow position:
               chr25:9002515-9002733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 214
               

               Conread position:
               76-300
               

               Cow position:
               chr25:6996622-6996855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 175
               

               Conread position:
               76-300
               

               Cow position:
               chr25:17991743-17991516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               76-300
               

               Cow position:
               chr25:18894879-18894658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 98
               

               Conread position:
               76-304
               

               Cow position:
               chr25:18905725-18905960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               76-311
               

               Cow position:
               chr25:4681077-4681312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               126, 60
               

               Conread position:
               76-315
               

               Cow position:
               chr25:15440940-15440691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               76-323
               

               Cow position:
               chr25:7750294-7750545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               76-324
               

               Cow position:
               chr25:26679068-26679320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 215
               

               Conread position:
               76-325
               

               Cow position:
               chr25:23245169-23244907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               59, 251
               

               Conread position:
               76-325
               

               Cow position:
               chr25:32277759-32277512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               47, 177
               

               Conread position:
               76-325
               

               Cow position:
               chr25:41151120-41150870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               190, 80
               

               Conread position:
               82-300
               

               Cow position:
               chr25:5920784-5921015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               82-325
               

               Cow position:
               chr25:8961620-8961865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               93, 227
               

               Conread position:
               83-291
               

               Cow position:
               chr25:16570461-16570664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               83-312
               

               Cow position:
               chr25:5474379-5474147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               87-325
               

               Cow position:
               chr25:21668097-21668344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               115, 236
               

               Conread position:
               88-300
               

               Cow position:
               chr25:19317111-19317336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               88-305
               

               Cow position:
               chr25:6687802-6688021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 51
               

               Conread position:
               88-325
               

               Cow position:
               chr25:30618918-30619158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               89-325
               

               Cow position:
               chr25:12609198-12609435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               112, 74
               

               Conread position:
               90-243
               

               Cow position:
               chr25:32588025-32587867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               91-305
               

               Cow position:
               chr25:11066293-11066067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               93-308
               

               Cow position:
               chr25:13566820-13567047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               94-325
               

               Cow position:
               chr25:22730691-22730923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               96-307
               

               Cow position:
               chr25:20523370-20523156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               97-304
               

               Cow position:
               chr25:24051824-24052040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               86, 211
               

               Conread position:
               99-325
               

               Cow position:
               chr25:24203129-24202917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               101-323
               

               Cow position:
               chr25:12510144-12509918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               101-325
               

               Cow position:
               chr25:19364193-19363964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               103-285
               

               Cow position:
               chr25:7449675-7449856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               161, 30
               

               Conread position:
               103-325
               

               Cow position:
               chr25:9843043-9843271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               105, 70
               

               Conread position:
               103-325
               

               Cow position:
               chr25:11051397-11051624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 34
               

               Conread position:
               103-325
               

               Cow position:
               chr25:14157489-14157720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               107-325
               

               Cow position:
               chr25:4245561-4245765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               158, 34
               

               Conread position:
               110-312
               

               Cow position:
               chr25:18202052-18201846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               110-325
               

               Cow position:
               chr25:33457604-33457827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               84, 71
               

               Conread position:
               115-267
               

               Cow position:
               chr25:26642462-26642621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               116-325
               

               Cow position:
               chr25:36872242-36872453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               148, 200
               

               Conread position:
               117-324
               

               Cow position:
               chr25:11433072-11432851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               56, 211
               

               Conread position:
               120-267
               

               Cow position:
               chr25:13139704-13139859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 137
               

               Conread position:
               121-302
               

               Cow position:
               chr25:15634588-15634396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               121-308
               

               Cow position:
               chr25:7035440-7035635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               122-321
               

               Cow position:
               chr25:30816772-30816980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 201
               

               Conread position:
               123-322
               

               Cow position:
               chr25:22341413-22341617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               129-325
               

               Cow position:
               chr25:36555796-36555594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 191
               

               Conread position:
               139-325
               

               Cow position:
               chr25:6134188-6133996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               142-325
               

               Cow position:
               chr25:4947869-4948057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               144-325
               

               Cow position:
               chr25:5919992-5920176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 173
               

               Conread position:
               149-325
               

               Cow position:
               chr25:7799466-7799642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               115, 56
               

               Conread position:
               150-325
               

               Cow position:
               chr25:13621445-13621264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 159
               

               Conread position:
               155-325
               

               Cow position:
               chr25:40931194-40931368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 109
               

               Conread position:
               159-325
               

               Cow position:
               chr25:11823509-11823335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 163
               

               Conread position:
               159-325
               

               Cow position:
               chr25:14809203-14809368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               159-325
               

               Cow position:
               chr25:23504970-23505147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               35, 166
               

               Conread position:
               160-322
               

               Cow position:
               chr25:36021247-36021415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 160
               

               Conread position:
               162-325
               

               Cow position:
               chr25:7379224-7379052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               170-325
               

               Cow position:
               chr25:1840255-1840419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               30, 153
               

               Conread position:
               178-325
               

               Cow position:
               chr25:22348518-22348368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               178-325
               

               Cow position:
               chr25:35762532-35762682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 66
               

               Conread position:
               185-325
               

               Cow position:
               chr25:13222854-13222995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               191-324
               

               Cow position:
               chr25:18288808-18288675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               193-325
               

               Cow position:
               chr25:18929230-18929097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 16
               
Show alignments to all cow chromosomes.
Conread position:	1-132
Cow position:	chr25:9842758-9842900 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	114
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	5, 46
Conread position:	1-165
Cow position:	chr25:24136677-24136506 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	123
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	19, 0
Conread position:	1-167
Cow position:	chr25:2110841-2111008 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	135
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	16, 63
Conread position:	1-168
Cow position:	chr25:18490830-18491007 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	129
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	20, 0
Conread position:	1-176
Cow position:	chr25:17702205-17702030 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	131
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	12, 75
Conread position:	1-178
Cow position:	chr25:12195567-12195385 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	139
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	16, 69
Conread position:	1-187
Cow position:	chr25:17712292-17712488 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	150
Alignm E-value:	5e-34
Alignm gaps (pig, cow):	20, 0
Conread position:	1-196
Cow position:	chr25:12204228-12204431 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	158
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	20, 0
Conread position:	1-197
Cow position:	chr25:6424827-6424626 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	144
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	77, 147
Conread position:	1-206
Cow position:	chr25:8347267-8347479 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	176
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 96
Conread position:	1-213
Cow position:	chr25:20060273-20060052 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	164
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	22, 193
Conread position:	1-239
Cow position:	chr25:4002554-4002809 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	182
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	20, 0
Conread position:	1-243
Cow position:	chr25:5514765-5515025 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	184
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	10, 0
Conread position:	1-244
Cow position:	chr25:16400492-16400261 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	182
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	21, 64
Conread position:	1-245
Cow position:	chr25:6470462-6470201 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	181
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	20, 0
Conread position:	1-253
Cow position:	chr25:20211328-20211059 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	194
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	15, 137
Conread position:	1-263
Cow position:	chr25:2046796-2046529 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	181
Alignm E-value:	6e-27
Alignm gaps (pig, cow):	13, 75
Conread position:	1-264
Cow position:	chr25:6891762-6891503 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	196
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	11, 78
Conread position:	1-267
Cow position:	chr25:1735558-1735285 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	204
Alignm E-value:	3.9937e-43
Alignm gaps (pig, cow):	20, 134
Conread position:	1-268
Cow position:	chr25:41132597-41132325 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	189
Alignm E-value:	6e-37
Alignm gaps (pig, cow):	20, 0