Cow genome map
| Conread name: | rlin40_n18.y1 |
| Conread position: | 1-142 |
| Cow position: | chr12:7110191-7110056 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-152 |
| Cow position: | chr12:19258274-19258125 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 1-170 |
| Cow position: | chr12:19507631-19507458 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 57 |
| Conread position: | 1-170 |
| Cow position: | chr12:27365922-27365752 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 1-171 |
| Cow position: | chr12:44920029-44919859 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 1-173 |
| Cow position: | chr12:4719941-4719768 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 105, 61 |
| Conread position: | 1-174 |
| Cow position: | chr12:11587768-11587589 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 100, 66 |
| Conread position: | 1-174 |
| Cow position: | chr12:23855833-23855657 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 1-177 |
| Cow position: | chr12:15050622-15050801 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 1-188 |
| Cow position: | chr12:33976193-33976009 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 1-190 |
| Cow position: | chr12:10491266-10491077 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 1-191 |
| Cow position: | chr12:29921791-29921978 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-204 |
| Cow position: | chr12:30210477-30210264 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 1-208 |
| Cow position: | chr12:25452453-25452662 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 1-210 |
| Cow position: | chr12:31948109-31947903 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-218 |
| Cow position: | chr12:27037456-27037677 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 62 |
| Conread position: | 1-218 |
| Cow position: | chr12:28748936-28748706 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 1-219 |
| Cow position: | chr12:3906467-3906239 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 1-224 |
| Cow position: | chr12:1030974-1030746 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 148, 62 |
| Conread position: | 1-225 |
| Cow position: | chr12:4162369-4162606 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 1-226 |
| Cow position: | chr12:15163133-15162914 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 1-228 |
| Cow position: | chr12:30476477-30476239 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 1-228 |
| Cow position: | chr12:35378196-35377961 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 67 |
| Conread position: | 1-230 |
| Cow position: | chr12:12030834-12031075 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 1-239 |
| Cow position: | chr12:34161407-34161167 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 1-242 |
| Cow position: | chr12:28213504-28213266 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 1-243 |
| Cow position: | chr12:23798095-23797850 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 84 |
| Conread position: | 1-247 |
| Cow position: | chr12:5635459-5635705 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 147, 54 |
| Conread position: | 1-247 |
| Cow position: | chr12:40028760-40029012 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 106, 71 |
| Conread position: | 1-249 |
| Cow position: | chr12:5940335-5940084 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 1-249 |
| Cow position: | chr12:17774788-17774546 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 1-252 |
| Cow position: | chr12:18765979-18766243 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 57, 53 |
| Conread position: | 1-255 |
| Cow position: | chr12:42282845-42283102 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 106, 55 |
| Conread position: | 1-263 |
| Cow position: | chr12:39465573-39465305 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 147, 52 |
| Conread position: | 1-264 |
| Cow position: | chr12:17624831-17625092 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 113, 62 |
| Conread position: | 1-266 |
| Cow position: | chr12:30661956-30662226 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-267 |
| Cow position: | chr12:15783915-15783656 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 106, 35 |
| Conread position: | 1-268 |
| Cow position: | chr12:42879688-42879429 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 1-268 |
| Cow position: | chr12:44846381-44846115 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 1-270 |
| Cow position: | chr12:34466010-34466281 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 1-272 |
| Cow position: | chr12:34473627-34473897 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 1-272 |
| Cow position: | chr12:36500954-36501235 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 1-274 |
| Cow position: | chr12:18388295-18388566 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 1-275 |
| Cow position: | chr12:32169534-32169250 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 1-277 |
| Cow position: | chr12:12178917-12178634 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 43 |
| Conread position: | 1-283 |
| Cow position: | chr12:5714624-5714336 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 1-284 |
| Cow position: | chr12:5906050-5905763 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 1-284 |
| Cow position: | chr12:9914783-9914495 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-284 |
| Cow position: | chr12:19715042-19715321 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 48 |
| Conread position: | 1-284 |
| Cow position: | chr12:20326768-20326477 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 1-284 |
| Cow position: | chr12:22882050-22881758 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 62 |
| Conread position: | 1-286 |
| Cow position: | chr12:24107551-24107844 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 109, 54 |
| Conread position: | 1-292 |
| Cow position: | chr12:3955779-3956077 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 1-293 |
| Cow position: | chr12:17080254-17079955 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 54 |
| Conread position: | 1-293 |
| Cow position: | chr12:41159584-41159294 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 95, 62 |
| Conread position: | 1-294 |
| Cow position: | chr12:1343116-1343402 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 1-294 |
| Cow position: | chr12:4866811-4866512 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 1-294 |
| Cow position: | chr12:24559352-24559046 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 102, 62 |
| Conread position: | 1-294 |
| Cow position: | chr12:27803056-27803353 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 147, 70 |
| Conread position: | 1-295 |
| Cow position: | chr12:18518667-18518368 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 1-295 |
| Cow position: | chr12:41474083-41473787 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 1-295 |
| Cow position: | chr12:42254661-42254353 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 1-296 |
| Cow position: | chr12:29995470-29995768 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 1-296 |
| Cow position: | chr12:30596461-30596157 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 105, 71 |
| Conread position: | 1-296 |
| Cow position: | chr12:31198761-31198462 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 108, 71 |
| Conread position: | 1-296 |
| Cow position: | chr12:31228566-31228273 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 89 |
| Conread position: | 1-297 |
| Cow position: | chr12:11056869-11056569 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 126, 62 |
| Conread position: | 1-297 |
| Cow position: | chr12:19664538-19664822 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 105, 46 |
| Conread position: | 1-300 |
| Cow position: | chr12:30919419-30919126 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 155 |
| Conread position: | 1-302 |
| Cow position: | chr12:730942-731237 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 43 |
| Conread position: | 1-302 |
| Cow position: | chr12:15531052-15530752 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 62 |
| Conread position: | 1-303 |
| Cow position: | chr12:30805847-30805542 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-308 |
| Cow position: | chr12:1284468-1284775 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-308 |
| Cow position: | chr12:6410741-6411043 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 54 |
| Conread position: | 1-308 |
| Cow position: | chr12:44517744-44518053 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 1-318 |
| Cow position: | chr12:7000609-7000917 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-322 |
| Cow position: | chr12:6720322-6719993 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 6, 56 |
| Conread position: | 1-323 |
| Cow position: | chr12:35368636-35368310 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 62 |
| Conread position: | 1-325 |
| Cow position: | chr12:11836228-11835910 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 1-329 |
| Cow position: | chr12:1889584-1889921 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 105, 37 |
| Conread position: | 1-331 |
| Cow position: | chr12:16543587-16543909 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 1-334 |
| Cow position: | chr12:18943664-18943988 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 1-336 |
| Cow position: | chr12:27563383-27563717 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 105, 60 |
| Conread position: | 1-337 |
| Cow position: | chr12:45814264-45814605 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 1-338 |
| Cow position: | chr12:1773671-1774005 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 1-338 |
| Cow position: | chr12:4341750-4342063 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 54 |
| Conread position: | 1-338 |
| Cow position: | chr12:6241313-6240965 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 1-338 |
| Cow position: | chr12:9143381-9143050 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 47 |
| Conread position: | 1-338 |
| Cow position: | chr12:9710214-9710547 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 106, 66 |
| Conread position: | 1-338 |
| Cow position: | chr12:17881855-17881530 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 54 |
| Conread position: | 1-338 |
| Cow position: | chr12:19691237-19691574 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 1-338 |
| Cow position: | chr12:21393700-21393356 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 1-338 |
| Cow position: | chr12:25561364-25561029 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 1-338 |
| Cow position: | chr12:29969573-29969237 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-338 |
| Cow position: | chr12:30438234-30437909 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 54 |
| Conread position: | 1-338 |
| Cow position: | chr12:30753714-30753384 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 258 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 105, 56 |
| Conread position: | 1-338 |
| Cow position: | chr12:34673346-34673671 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 109, 47 |
| Conread position: | 1-338 |
| Cow position: | chr12:40910295-40910632 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 64 |
| Conread position: | 1-338 |
| Cow position: | chr12:41581108-41580775 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 144, 54 |
| Conread position: | 1-338 |
| Cow position: | chr12:42181135-42181480 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 76 |
| Conread position: | 1-338 |
| Cow position: | chr12:42602249-42602578 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 147, 54 |
| Conread position: | 1-339 |
| Cow position: | chr12:31429577-31429899 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 1-339 |
| Cow position: | chr12:44013846-44014183 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 1-342 |
| Cow position: | chr12:3568935-3568604 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 58 |
| Conread position: | 1-342 |
| Cow position: | chr12:7960587-7960905 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 1-342 |
| Cow position: | chr12:19508565-19508915 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 1-342 |
| Cow position: | chr12:19866233-19865896 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 1-342 |
| Cow position: | chr12:28010914-28011245 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 48 |
| Conread position: | 1-342 |
| Cow position: | chr12:33323502-33323844 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-342 |
| Cow position: | chr12:44595816-44596160 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 1-342 |
| Cow position: | chr12:47804151-47803809 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 64 |
| Conread position: | 2-223 |
| Cow position: | chr12:38454902-38454685 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 174, 53 |
| Conread position: | 2-270 |
| Cow position: | chr12:27562835-27563117 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 2-322 |
| Cow position: | chr12:44905625-44905311 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 150, 53 |
| Conread position: | 2-338 |
| Cow position: | chr12:7978033-7977708 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 2-339 |
| Cow position: | chr12:6210165-6210512 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 53 |
| Conread position: | 3-146 |
| Cow position: | chr12:3197261-3197128 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 3-233 |
| Cow position: | chr12:23574755-23574527 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 156, 52 |
| Conread position: | 3-253 |
| Cow position: | chr12:46333340-46333099 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 52 |
| Conread position: | 3-277 |
| Cow position: | chr12:37732787-37733064 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 3-283 |
| Cow position: | chr12:41091525-41091236 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 3-284 |
| Cow position: | chr12:3510553-3510271 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 3-284 |
| Cow position: | chr12:48415524-48415805 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 3-286 |
| Cow position: | chr12:37728137-37727851 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 3-303 |
| Cow position: | chr12:8943232-8943535 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 44 |
| Conread position: | 3-336 |
| Cow position: | chr12:9482313-9482635 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 3-338 |
| Cow position: | chr12:5801032-5800696 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 3-338 |
| Cow position: | chr12:29483894-29484230 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 52 |
| Conread position: | 3-338 |
| Cow position: | chr12:37770869-37770529 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 60 |
| Conread position: | 3-341 |
| Cow position: | chr12:31532408-31532758 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 4-179 |
| Cow position: | chr12:4122553-4122725 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 58 |
| Conread position: | 4-301 |
| Cow position: | chr12:30590755-30590466 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 5-158 |
| Cow position: | chr12:41215891-41216046 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 5-173 |
| Cow position: | chr12:23916836-23916665 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 5-198 |
| Cow position: | chr12:33851351-33851155 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 105, 50 |
| Conread position: | 5-202 |
| Cow position: | chr12:42163036-42162827 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 5-210 |
| Cow position: | chr12:3060097-3060310 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 5-224 |
| Cow position: | chr12:30194702-30194473 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 5-242 |
| Cow position: | chr12:3057054-3056817 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 5-270 |
| Cow position: | chr12:17717059-17716803 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 5-271 |
| Cow position: | chr12:25320908-25320642 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 5-283 |
| Cow position: | chr12:5899515-5899234 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 5-284 |
| Cow position: | chr12:28582514-28582786 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 61 |
| Conread position: | 5-288 |
| Cow position: | chr12:34007297-34007001 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 5-291 |
| Cow position: | chr12:34385517-34385815 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 5-301 |
| Cow position: | chr12:3950355-3950660 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 55 |
| Conread position: | 5-303 |
| Cow position: | chr12:20479341-20479625 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 53 |
| Conread position: | 5-310 |
| Cow position: | chr12:12304377-12304081 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 5-315 |
| Cow position: | chr12:8868885-8869208 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 5-338 |
| Cow position: | chr12:28572677-28572361 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 50 |
| Conread position: | 5-342 |
| Cow position: | chr12:25312378-25312723 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 101, 45 |
| Conread position: | 6-311 |
| Cow position: | chr12:36954389-36954695 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 6-321 |
| Cow position: | chr12:2670255-2669948 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 6-325 |
| Cow position: | chr12:19869452-19869135 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 7-173 |
| Cow position: | chr12:25340508-25340336 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 7-267 |
| Cow position: | chr12:12699776-12700052 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 100, 54 |
| Conread position: | 7-338 |
| Cow position: | chr12:18420934-18421268 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 7-342 |
| Cow position: | chr12:15938275-15938610 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 8-229 |
| Cow position: | chr12:41642419-41642196 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 127, 64 |
| Conread position: | 8-297 |
| Cow position: | chr12:33458136-33457841 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 98, 55 |
| Conread position: | 9-296 |
| Cow position: | chr12:26782870-26782575 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 9-338 |
| Cow position: | chr12:2711484-2711150 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 54 |
| Conread position: | 9-338 |
| Cow position: | chr12:11583376-11583064 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 9-342 |
| Cow position: | chr12:2286569-2286234 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 10-172 |
| Cow position: | chr12:25110453-25110612 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 90 |
| Conread position: | 10-208 |
| Cow position: | chr12:4714347-4714157 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 138, 45 |
| Conread position: | 10-297 |
| Cow position: | chr12:6489004-6489285 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 105, 10 |
| Conread position: | 10-298 |
| Cow position: | chr12:24032990-24032698 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 10-338 |
| Cow position: | chr12:2241904-2242231 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 53 |
| Conread position: | 10-338 |
| Cow position: | chr12:42966985-42966659 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 11-211 |
| Cow position: | chr12:36544659-36544870 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 62 |
| Conread position: | 11-338 |
| Cow position: | chr12:36012629-36012963 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 12-294 |
| Cow position: | chr12:7147671-7147373 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 12-306 |
| Cow position: | chr12:22047453-22047153 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 14-325 |
| Cow position: | chr12:18550862-18550559 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 14-338 |
| Cow position: | chr12:31959867-31959551 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 41 |
| Conread position: | 15-338 |
| Cow position: | chr12:3039491-3039173 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 91, 51 |
| Conread position: | 16-234 |
| Cow position: | chr12:24211392-24211172 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 132, 47 |
| Conread position: | 20-169 |
| Cow position: | chr12:20354951-20354796 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 20-215 |
| Cow position: | chr12:18021567-18021368 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 20-219 |
| Cow position: | chr12:25820455-25820662 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 20-223 |
| Cow position: | chr12:38511861-38512075 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 91, 35 |
| Conread position: | 20-249 |
| Cow position: | chr12:4182716-4182955 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 20-275 |
| Cow position: | chr12:41214346-41214603 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 20-284 |
| Cow position: | chr12:25456094-25455820 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 20-303 |
| Cow position: | chr12:28650932-28650644 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 20-338 |
| Cow position: | chr12:24440790-24440470 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 23-215 |
| Cow position: | chr12:44559560-44559361 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 24-302 |
| Cow position: | chr12:32391819-32391533 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 25-342 |
| Cow position: | chr12:6226683-6226977 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 82, 7 |
| Conread position: | 26-296 |
| Cow position: | chr12:46143791-46143515 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 31-309 |
| Cow position: | chr12:44767040-44766765 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 50-321 |
| Cow position: | chr12:47929164-47928886 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 53-282 |
| Cow position: | chr12:11109714-11109478 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 65-262 |
| Cow position: | chr12:31841379-31841165 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 67-302 |
| Cow position: | chr12:41084001-41083754 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 72-323 |
| Cow position: | chr12:9465533-9465787 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 73-297 |
| Cow position: | chr12:12017807-12017569 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 74-296 |
| Cow position: | chr12:19872353-19872132 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 74-321 |
| Cow position: | chr12:17472298-17472545 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 74-324 |
| Cow position: | chr12:22260895-22261142 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 109 |
| Conread position: | 74-336 |
| Cow position: | chr12:2805120-2805384 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 199 |
| Conread position: | 74-338 |
| Cow position: | chr12:9413854-9414108 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 74-338 |
| Cow position: | chr12:26868866-26869138 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 192 |
| Conread position: | 75-200 |
| Cow position: | chr12:4085840-4085714 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 75-338 |
| Cow position: | chr12:18076460-18076194 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 75-338 |
| Cow position: | chr12:19420008-19420274 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 76-247 |
| Cow position: | chr12:15240797-15240981 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 76-252 |
| Cow position: | chr12:29161889-29162073 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 76-253 |
| Cow position: | chr12:3994882-3994686 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 76-284 |
| Cow position: | chr12:40270166-40270380 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 108 |
| Conread position: | 76-288 |
| Cow position: | chr12:40158312-40158537 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 198 |
| Conread position: | 78-283 |
| Cow position: | chr12:16605737-16605939 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 78-338 |
| Cow position: | chr12:38010135-38010396 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 91 |
| Conread position: | 79-326 |
| Cow position: | chr12:1848611-1848877 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 80-291 |
| Cow position: | chr12:9229564-9229783 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 93-231 |
| Cow position: | chr12:24180806-24180656 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 93-338 |
| Cow position: | chr12:35218495-35218746 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 180 |
| Conread position: | 94-278 |
| Cow position: | chr12:4134575-4134377 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 53, 181 |
| Conread position: | 96-336 |
| Cow position: | chr12:35310772-35311013 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 97-295 |
| Cow position: | chr12:6687765-6687564 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 97-338 |
| Cow position: | chr12:7311297-7311066 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 99-338 |
| Cow position: | chr12:24755127-24755366 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 100-278 |
| Cow position: | chr12:36041831-36042021 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 102-338 |
| Cow position: | chr12:20316616-20316848 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 161 |
| Conread position: | 104-277 |
| Cow position: | chr12:23154568-23154753 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 105-261 |
| Cow position: | chr12:8710719-8710560 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 105-296 |
| Cow position: | chr12:3076723-3076929 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 105-296 |
| Cow position: | chr12:19154722-19154917 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 105-325 |
| Cow position: | chr12:42160653-42160889 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 181 |
| Conread position: | 105-326 |
| Cow position: | chr12:34148456-34148681 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 109 |
| Conread position: | 105-329 |
| Cow position: | chr12:5863459-5863242 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 105-330 |
| Cow position: | chr12:3880359-3880593 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 194 |
| Conread position: | 105-338 |
| Cow position: | chr12:16359772-16359532 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 194 |
| Conread position: | 105-338 |
| Cow position: | chr12:45801817-45802041 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 105-339 |
| Cow position: | chr12:4008384-4008624 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 38, 143 |
| Conread position: | 106-296 |
| Cow position: | chr12:40307590-40307390 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 107-285 |
| Cow position: | chr12:25805219-25805405 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 109-306 |
| Cow position: | chr12:43783268-43783456 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 113-292 |
| Cow position: | chr12:21486469-21486292 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 119-330 |
| Cow position: | chr12:7109071-7108851 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 198 |
| Conread position: | 119-338 |
| Cow position: | chr12:37123390-37123171 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 140-321 |
| Cow position: | chr12:15107554-15107371 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 122 |
| Conread position: | 154-338 |
| Cow position: | chr12:20283751-20283559 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 144 |
| Conread position: | 171-318 |
| Cow position: | chr12:31261692-31261543 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.