Cow genome map

Conread name: rlin40_n18.y1

Conread position: 1-126
Cow position: chr17:25126423-25126303 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 62

Conread position: 1-146
Cow position: chr17:1466355-1466498 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 21

Conread position: 1-146
Cow position: chr17:1469452-1469308 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 105, 54

Conread position: 1-146
Cow position: chr17:2275543-2275406 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 1-146
Cow position: chr17:22056955-22057091 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 1-146
Cow position: chr17:29026144-29025999 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 90

Conread position: 1-146
Cow position: chr17:31856746-31856602 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 62

Conread position: 1-146
Cow position: chr17:36864703-36864562 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 1-157
Cow position: chr17:38263417-38263568 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 54

Conread position: 1-162
Cow position: chr17:10431905-10432063 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 54

Conread position: 1-166
Cow position: chr17:21922561-21922713 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 145, 54

Conread position: 1-167
Cow position: chr17:21489552-21489716 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 25

Conread position: 1-170
Cow position: chr17:27202973-27203139 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 54

Conread position: 1-174
Cow position: chr17:14652707-14652879 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 54

Conread position: 1-174
Cow position: chr17:21325405-21325234 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 50

Conread position: 1-178
Cow position: chr17:11832042-11832223 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 89, 65

Conread position: 1-183
Cow position: chr17:23798354-23798168 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 62

Conread position: 1-188
Cow position: chr17:7654379-7654567 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 62

Conread position: 1-188
Cow position: chr17:25594618-25594822 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 105, 70

Conread position: 1-188
Cow position: chr17:32349144-32348959 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 148, 65

Conread position: 1-192
Cow position: chr17:17266818-17267012 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 106, 62

Conread position: 1-199
Cow position: chr17:20884596-20884397 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 89, 62

Conread position: 1-204
Cow position: chr17:32280737-32280535 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 41

Conread position: 1-211
Cow position: chr17:24928548-24928337 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 110, 46

Conread position: 1-215
Cow position: chr17:20874469-20874249 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 46

Conread position: 1-216
Cow position: chr17:6329188-6328961 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 71

Conread position: 1-227
Cow position: chr17:14762049-14762277 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 105, 54

Conread position: 1-230
Cow position: chr17:25916968-25916731 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 89, 54

Conread position: 1-231
Cow position: chr17:7142934-7142702 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 101, 62

Conread position: 1-231
Cow position: chr17:27058484-27058715 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 59

Conread position: 1-234
Cow position: chr17:17682831-17683063 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 66, 54

Conread position: 1-237
Cow position: chr17:21917800-21918042 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 29

Conread position: 1-240
Cow position: chr17:15340679-15340908 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 56

Conread position: 1-241
Cow position: chr17:1634419-1634654 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 145, 62

Conread position: 1-246
Cow position: chr17:24149257-24149000 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 105, 54

Conread position: 1-246
Cow position: chr17:38362910-38363148 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 1-249
Cow position: chr17:29157492-29157238 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 49

Conread position: 1-249
Cow position: chr17:36203408-36203670 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 90, 0

Conread position: 1-257
Cow position: chr17:908813-908558 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 41

Conread position: 1-259
Cow position: chr17:12536392-12536658 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 62

Conread position: 1-263
Cow position: chr17:11277955-11278226 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 106, 62

Conread position: 1-265
Cow position: chr17:12108877-12108608 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 105, 54

Conread position: 1-265
Cow position: chr17:24824315-24824056 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 54

Conread position: 1-266
Cow position: chr17:9911833-9911566 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 62

Conread position: 1-266
Cow position: chr17:10458859-10459133 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 66

Conread position: 1-267
Cow position: chr17:7648285-7648022 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 76, 48

Conread position: 1-267
Cow position: chr17:24490614-24490323 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 72

Conread position: 1-269
Cow position: chr17:31231044-31231314 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 102, 10

Conread position: 1-270
Cow position: chr17:32273614-32273883 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 55

Conread position: 1-272
Cow position: chr17:12447328-12447601 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 105, 53

Conread position: 1-273
Cow position: chr17:44232639-44232924 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 105, 54

Conread position: 1-274
Cow position: chr17:21628551-21628277 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 20

Conread position: 1-275
Cow position: chr17:1035524-1035810 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 62

Conread position: 1-278
Cow position: chr17:20932404-20932127 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 62

Conread position: 1-278
Cow position: chr17:32278835-32279116 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 41

Conread position: 1-278
Cow position: chr17:38647134-38646859 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 62

Conread position: 1-281
Cow position: chr17:1275599-1275307 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 102, 29

Conread position: 1-281
Cow position: chr17:40741725-40741435 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 1-283
Cow position: chr17:30718345-30718633 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 61

Conread position: 1-283
Cow position: chr17:32471708-32472005 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 105, 62

Conread position: 1-284
Cow position: chr17:11156420-11156708 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 58

Conread position: 1-284
Cow position: chr17:13922556-13922258 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 64

Conread position: 1-284
Cow position: chr17:21738801-21739099 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 54

Conread position: 1-288
Cow position: chr17:24752246-24752513 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 66

Conread position: 1-289
Cow position: chr17:20835654-20835373 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 147, 41

Conread position: 1-290
Cow position: chr17:41289949-41290240 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 54

Conread position: 1-291
Cow position: chr17:20848595-20848309 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 10

Conread position: 1-291
Cow position: chr17:27048229-27047941 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-291
Cow position: chr17:29472539-29472253 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 31

Conread position: 1-291
Cow position: chr17:30665345-30665052 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-293
Cow position: chr17:21114881-21115174 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 70

Conread position: 1-294
Cow position: chr17:2034602-2034320 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 147, 54

Conread position: 1-294
Cow position: chr17:14848469-14848749 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 10

Conread position: 1-294
Cow position: chr17:18495444-18495734 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 55

Conread position: 1-294
Cow position: chr17:21599610-21599906 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 47

Conread position: 1-294
Cow position: chr17:31480972-31481267 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 146, 54

Conread position: 1-294
Cow position: chr17:37481996-37482313 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 99

Conread position: 1-296
Cow position: chr17:11664512-11664815 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 105, 62

Conread position: 1-296
Cow position: chr17:14025838-14026142 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 104, 62

Conread position: 1-296
Cow position: chr17:15299799-15300097 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 15

Conread position: 1-296
Cow position: chr17:17060609-17060912 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 111, 37

Conread position: 1-296
Cow position: chr17:20081725-20082006 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 134, 60

Conread position: 1-296
Cow position: chr17:20839493-20839785 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 1-297
Cow position: chr17:1020488-1020797 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 82, 51

Conread position: 1-297
Cow position: chr17:5422996-5423299 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 62

Conread position: 1-297
Cow position: chr17:15102821-15103116 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 147, 47

Conread position: 1-297
Cow position: chr17:15333637-15333938 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-297
Cow position: chr17:38615033-38614728 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 47, 70

Conread position: 1-300
Cow position: chr17:13940249-13940551 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 146, 54

Conread position: 1-301
Cow position: chr17:5733395-5733679 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 1-302
Cow position: chr17:7698124-7697823 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-302
Cow position: chr17:17410366-17410065 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-309
Cow position: chr17:18490613-18490293 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 106, 62

Conread position: 1-313
Cow position: chr17:7132367-7132698 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 53

Conread position: 1-313
Cow position: chr17:18720374-18720693 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 62

Conread position: 1-320
Cow position: chr17:39857463-39857167 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 147, 54

Conread position: 1-321
Cow position: chr17:8079385-8079067 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 1-321
Cow position: chr17:16371329-16371004 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 62

Conread position: 1-321
Cow position: chr17:20780586-20780264 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 69

Conread position: 1-321
Cow position: chr17:27142821-27142504 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 64

Conread position: 1-324
Cow position: chr17:21243714-21244042 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 147, 62

Conread position: 1-328
Cow position: chr17:13243972-13244279 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 71

Conread position: 1-328
Cow position: chr17:21959615-21959932 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 53

Conread position: 1-329
Cow position: chr17:12059020-12059350 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 14

Conread position: 1-335
Cow position: chr17:19891697-19891355 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 128, 71

Conread position: 1-335
Cow position: chr17:22775447-22775132 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 54

Conread position: 1-336
Cow position: chr17:1493076-1493417 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-336
Cow position: chr17:11397740-11397409 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 55

Conread position: 1-336
Cow position: chr17:21680855-21680507 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 147

Conread position: 1-337
Cow position: chr17:9117717-9117381 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 62

Conread position: 1-337
Cow position: chr17:20032839-20033176 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 85

Conread position: 1-337
Cow position: chr17:30529472-30529798 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 1-337
Cow position: chr17:40331840-40331507 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 47

Conread position: 1-338
Cow position: chr17:4213815-4213494 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 166, 62

Conread position: 1-338
Cow position: chr17:8544379-8544045 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 1-338
Cow position: chr17:14003898-14003566 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 64

Conread position: 1-338
Cow position: chr17:15664750-15664406 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 62

Conread position: 1-338
Cow position: chr17:17121744-17121413 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 54

Conread position: 1-338
Cow position: chr17:17222413-17222081 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 61

Conread position: 1-338
Cow position: chr17:18109011-18109349 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 51

Conread position: 1-338
Cow position: chr17:18860648-18860981 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-338
Cow position: chr17:20093053-20093387 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 48, 64

Conread position: 1-338
Cow position: chr17:20800886-20800553 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 21

Conread position: 1-338
Cow position: chr17:21335619-21335961 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 1-338
Cow position: chr17:21973057-21973394 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 62

Conread position: 1-338
Cow position: chr17:23063793-23063451 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 57

Conread position: 1-338
Cow position: chr17:24077476-24077143 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 40

Conread position: 1-338
Cow position: chr17:25541744-25542075 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 106, 49

Conread position: 1-338
Cow position: chr17:26514795-26514452 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 77

Conread position: 1-338
Cow position: chr17:27795723-27795385 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 56

Conread position: 1-338
Cow position: chr17:32027379-32027725 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 68

Conread position: 1-338
Cow position: chr17:32138351-32138660 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 1-338
Cow position: chr17:34079038-34079361 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 51

Conread position: 1-338
Cow position: chr17:38833116-38832779 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 90

Conread position: 1-339
Cow position: chr17:5900442-5900124 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 54

Conread position: 1-339
Cow position: chr17:24883498-24883829 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 55

Conread position: 1-339
Cow position: chr17:26183301-26182958 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 65

Conread position: 1-339
Cow position: chr17:26231027-26230675 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 61

Conread position: 1-341
Cow position: chr17:11296722-11296372 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 303

Conread position: 1-342
Cow position: chr17:923952-923613 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 61

Conread position: 1-342
Cow position: chr17:2006767-2006437 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 110, 39

Conread position: 1-342
Cow position: chr17:21292969-21293312 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 62

Conread position: 1-342
Cow position: chr17:22032625-22032950 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 111, 54

Conread position: 1-342
Cow position: chr17:23879748-23880094 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 46

Conread position: 1-342
Cow position: chr17:40288927-40289267 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 54

Conread position: 2-141
Cow position: chr17:39715232-39715094 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 61

Conread position: 2-143
Cow position: chr17:4683421-4683281 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 61

Conread position: 2-178
Cow position: chr17:33410943-33411126 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 61

Conread position: 2-223
Cow position: chr17:24559362-24559145 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 104, 50

Conread position: 2-225
Cow position: chr17:11962461-11962705 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 2-249
Cow position: chr17:12946277-12946546 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 61, 261

Conread position: 2-253
Cow position: chr17:8836874-8837133 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 61

Conread position: 2-274
Cow position: chr17:5694879-5695152 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 53

Conread position: 2-285
Cow position: chr17:24580222-24580515 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 53

Conread position: 2-291
Cow position: chr17:11101731-11102016 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 53

Conread position: 2-298
Cow position: chr17:9778315-9778022 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 53

Conread position: 2-316
Cow position: chr17:25335321-25335632 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 70

Conread position: 2-329
Cow position: chr17:28540102-28539773 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 65

Conread position: 2-332
Cow position: chr17:6566553-6566219 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 279

Conread position: 2-337
Cow position: chr17:3782119-3781774 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 61

Conread position: 2-337
Cow position: chr17:5350051-5350378 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 68

Conread position: 2-337
Cow position: chr17:34596012-34595682 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 104, 61

Conread position: 2-338
Cow position: chr17:10528656-10529004 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 106, 64

Conread position: 3-174
Cow position: chr17:11215157-11215328 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 62

Conread position: 3-221
Cow position: chr17:267514-267736 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 108, 52

Conread position: 3-223
Cow position: chr17:4786426-4786650 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 82

Conread position: 3-226
Cow position: chr17:18146256-18146025 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 64

Conread position: 3-234
Cow position: chr17:10510586-10510827 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 59

Conread position: 3-244
Cow position: chr17:12591240-12590988 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 103, 60

Conread position: 3-270
Cow position: chr17:40312777-40312520 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 101, 52

Conread position: 3-274
Cow position: chr17:25032411-25032677 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 103, 52

Conread position: 3-276
Cow position: chr17:6624327-6624051 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 52

Conread position: 3-302
Cow position: chr17:6423835-6423528 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 108, 60

Conread position: 3-303
Cow position: chr17:23246279-23245981 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 43

Conread position: 3-328
Cow position: chr17:36275404-36275096 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 103, 51

Conread position: 3-338
Cow position: chr17:5688290-5688610 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 109, 52

Conread position: 3-338
Cow position: chr17:34316643-34316980 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 60

Conread position: 3-339
Cow position: chr17:16448415-16448070 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 23

Conread position: 3-342
Cow position: chr17:24550248-24549903 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 52

Conread position: 4-264
Cow position: chr17:32950345-32950077 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 99, 40

Conread position: 4-264
Cow position: chr17:43323695-43323952 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 50

Conread position: 4-275
Cow position: chr17:20912958-20912692 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 144, 59

Conread position: 4-298
Cow position: chr17:24761158-24761452 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 5-188
Cow position: chr17:25502182-25501995 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 70

Conread position: 5-264
Cow position: chr17:26000190-25999921 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 101, 55

Conread position: 5-268
Cow position: chr17:21434658-21434928 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 25

Conread position: 5-273
Cow position: chr17:34864644-34864366 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 58

Conread position: 5-278
Cow position: chr17:966675-966948 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 60

Conread position: 5-278
Cow position: chr17:11362254-11361974 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 61

Conread position: 5-281
Cow position: chr17:11281027-11281319 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 56

Conread position: 5-284
Cow position: chr17:18246150-18245860 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 102, 45

Conread position: 5-284
Cow position: chr17:33271610-33271894 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 59

Conread position: 5-293
Cow position: chr17:34948707-34948416 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 44

Conread position: 5-296
Cow position: chr17:11215819-11216110 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 5-298
Cow position: chr17:20216237-20215943 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 120, 44

Conread position: 5-299
Cow position: chr17:24818305-24818023 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 58

Conread position: 5-308
Cow position: chr17:33998982-33999283 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 102, 49

Conread position: 5-336
Cow position: chr17:7760400-7760731 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 50

Conread position: 5-336
Cow position: chr17:25189358-25189022 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 50

Conread position: 5-338
Cow position: chr17:11618657-11618317 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 71

Conread position: 5-339
Cow position: chr17:25145255-25145574 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 99, 62

Conread position: 5-339
Cow position: chr17:40771905-40771564 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 49

Conread position: 6-231
Cow position: chr17:21298300-21298062 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 36

Conread position: 6-271
Cow position: chr17:22564256-22563981 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 49

Conread position: 6-274
Cow position: chr17:33290742-33291015 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 96, 66

Conread position: 6-338
Cow position: chr17:1081061-1080741 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 94, 49

Conread position: 6-338
Cow position: chr17:8690373-8690715 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 49

Conread position: 6-342
Cow position: chr17:3471487-3471148 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 49

Conread position: 7-230
Cow position: chr17:1353464-1353235 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 56

Conread position: 7-262
Cow position: chr17:37479928-37480186 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 97, 57

Conread position: 7-275
Cow position: chr17:27429646-27429372 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 56

Conread position: 7-284
Cow position: chr17:12219872-12220153 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 30

Conread position: 7-296
Cow position: chr17:29363294-29363590 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 123

Conread position: 8-284
Cow position: chr17:21323342-21323085 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 139, 46

Conread position: 8-297
Cow position: chr17:9746582-9746293 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 57

Conread position: 8-338
Cow position: chr17:9854050-9853723 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 123, 47

Conread position: 8-342
Cow position: chr17:21495444-21495110 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 47

Conread position: 8-342
Cow position: chr17:27306226-27305896 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 59

Conread position: 9-228
Cow position: chr17:28468193-28467977 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 46

Conread position: 9-240
Cow position: chr17:979093-979324 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 10, 47

Conread position: 9-338
Cow position: chr17:9565372-9565046 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 50

Conread position: 9-338
Cow position: chr17:12289344-12289682 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 289

Conread position: 9-339
Cow position: chr17:41030016-41029688 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 62

Conread position: 10-242
Cow position: chr17:20990129-20990367 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 17

Conread position: 11-198
Cow position: chr17:27183878-27184069 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 44

Conread position: 11-264
Cow position: chr17:33275685-33275941 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 76, 52

Conread position: 11-338
Cow position: chr17:19999200-19998872 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 42

Conread position: 12-237
Cow position: chr17:30359532-30359310 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 94, 42

Conread position: 12-282
Cow position: chr17:13143626-13143903 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 63

Conread position: 12-289
Cow position: chr17:27765336-27765062 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 52

Conread position: 12-291
Cow position: chr17:32419054-32419340 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 89, 51

Conread position: 14-260
Cow position: chr17:24773752-24773492 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 68, 136

Conread position: 15-183
Cow position: chr17:2839968-2839801 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 39

Conread position: 18-278
Cow position: chr17:5250520-5250765 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 30

Conread position: 18-338
Cow position: chr17:20992981-20993303 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 49

Conread position: 19-203
Cow position: chr17:25122353-25122536 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 35

Conread position: 19-261
Cow position: chr17:40893206-40892957 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 92, 17

Conread position: 19-335
Cow position: chr17:5224457-5224143 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 36

Conread position: 20-146
Cow position: chr17:26884686-26884560 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 43

Conread position: 20-173
Cow position: chr17:20306104-20305950 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 35

Conread position: 20-204
Cow position: chr17:11921220-11921412 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 55

Conread position: 20-282
Cow position: chr17:18884276-18884560 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 87, 52

Conread position: 20-284
Cow position: chr17:242692-242421 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 87, 35

Conread position: 20-296
Cow position: chr17:32651698-32651389 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 20-298
Cow position: chr17:5246948-5246671 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 35

Conread position: 20-317
Cow position: chr17:21031841-21031542 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 82, 35

Conread position: 20-336
Cow position: chr17:1295517-1295832 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 35

Conread position: 20-338
Cow position: chr17:22773275-22773596 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 35

Conread position: 20-338
Cow position: chr17:42347170-42347484 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 43

Conread position: 20-339
Cow position: chr17:11056315-11056643 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 24

Conread position: 21-283
Cow position: chr17:33122145-33121874 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 32

Conread position: 23-284
Cow position: chr17:33926072-33926336 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 88, 21

Conread position: 24-339
Cow position: chr17:21312759-21313079 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 39

Conread position: 25-284
Cow position: chr17:25097511-25097248 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 81, 26

Conread position: 26-220
Cow position: chr17:5381946-5382137 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 37

Conread position: 26-342
Cow position: chr17:3387321-3387030 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 243
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 122, 37

Conread position: 32-305
Cow position: chr17:15067583-15067857 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 78, 31

Conread position: 33-290
Cow position: chr17:42419761-42419512 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 22

Conread position: 35-264
Cow position: chr17:25141491-25141265 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 28

Conread position: 36-221
Cow position: chr17:484636-484451 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 73, 27

Conread position: 36-284
Cow position: chr17:4472777-4473018 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 70, 22

Conread position: 42-227
Cow position: chr17:20928944-20928752 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 36

Conread position: 42-227
Cow position: chr17:40792252-40792065 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 20

Conread position: 46-228
Cow position: chr17:38613283-38613087 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 9, 33

Conread position: 48-282
Cow position: chr17:5745224-5745456 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 15

Conread position: 61-338
Cow position: chr17:43717298-43717571 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 87, 203

Conread position: 63-297
Cow position: chr17:27819325-27819074 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 94

Conread position: 65-257
Cow position: chr17:4824510-4824306 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 7

Conread position: 66-278
Cow position: chr17:22781706-22781483 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 11

Conread position: 67-294
Cow position: chr17:29292352-29292596 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 67-338
Cow position: chr17:10649855-10649586 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 14

Conread position: 69-338
Cow position: chr17:25168328-25168050 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 206

Conread position: 72-338
Cow position: chr17:23101199-23101470 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 39, 228

Conread position: 72-342
Cow position: chr17:4606966-4606705 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 35, 19

Conread position: 73-336
Cow position: chr17:20126621-20126360 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 180

Conread position: 74-328
Cow position: chr17:3498658-3498920 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 236

Conread position: 74-338
Cow position: chr17:3843487-3843229 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 20, 16

Conread position: 74-338
Cow position: chr17:20083514-20083775 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 73, 9

Conread position: 76-284
Cow position: chr17:19455306-19455517 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 60

Conread position: 76-292
Cow position: chr17:21363411-21363183 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 16

Conread position: 76-325
Cow position: chr17:12216067-12216329 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 227

Conread position: 76-338
Cow position: chr17:20234234-20233964 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 31, 95

Conread position: 76-342
Cow position: chr17:4601541-4601810 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 31, 198

Conread position: 81-262
Cow position: chr17:24821864-24821677 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 34, 170

Conread position: 83-244
Cow position: chr17:36268386-36268221 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 30

Conread position: 83-314
Cow position: chr17:21419435-21419187 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 97-308
Cow position: chr17:30999751-30999540 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 24

Conread position: 101-338
Cow position: chr17:31231954-31232203 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 105-263
Cow position: chr17:3518280-3518446 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 82

Conread position: 105-264
Cow position: chr17:4436260-4436426 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 60

Conread position: 105-268
Cow position: chr17:21412273-21412446 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 105-281
Cow position: chr17:21710478-21710293 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 152
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 42, 56

Conread position: 105-284
Cow position: chr17:1358828-1359012 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 143

Conread position: 105-284
Cow position: chr17:3182612-3182799 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 43, 164

Conread position: 105-298
Cow position: chr17:32554052-32554252 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 28

Conread position: 105-330
Cow position: chr17:37163548-37163784 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 196

Conread position: 105-336
Cow position: chr17:27667216-27667455 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 194

Conread position: 105-338
Cow position: chr17:11381745-11381978 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 12

Conread position: 105-338
Cow position: chr17:17951214-17950980 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 201

Conread position: 106-338
Cow position: chr17:23337045-23337277 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 186

Conread position: 108-298
Cow position: chr17:14088353-14088556 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 109-284
Cow position: chr17:33052828-33052648 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 149
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 37, 0

Conread position: 113-322
Cow position: chr17:43527942-43527726 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 151

Conread position: 117-338
Cow position: chr17:16117462-16117691 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 31, 184

Conread position: 118-296
Cow position: chr17:36533616-36533434 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 119-219
Cow position: chr17:25334405-25334301 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 119-305
Cow position: chr17:8066976-8067168 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 145

Conread position: 119-321
Cow position: chr17:43826288-43826484 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 8

Conread position: 119-338
Cow position: chr17:20358834-20358615 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 112

Conread position: 144-319
Cow position: chr17:9057035-9057216 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 33, 7

Conread position: 151-302
Cow position: chr17:7423517-7423674 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 164-338
Cow position: chr17:2275181-2275011 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 147
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 124

Show alignments to all cow chromosomes.