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Cow genome map

           
Conread name:
           
rlin40_n18.y1
        

               
Conread position:
               
1-107
               

               
Cow position:
               
chr24:25752175-25752282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr24:39523441-39523572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:18017235-18017063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:19000055-18999883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr24:34008565-34008747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr24:35576530-35576704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr24:37037908-37037730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr24:29587008-29586811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr24:5633023-5633228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr24:16089236-16089037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr24:352598-352811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr24:28990569-28990359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
106, 45
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr24:28253715-28253495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr24:20801338-20801556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr24:10125882-10125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr24:15373413-15373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr24:16645312-16645537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr24:22079471-22079239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr24:16509985-16509751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr24:21918220-21918444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr24:20249888-20250134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:18344071-18343812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:25194273-25194030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr24:34410650-34410416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr24:10499223-10498966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr24:2095874-2096137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr24:17943164-17943416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr24:26732459-26732194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr24:27608090-27608358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr24:31378765-31378484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr24:17955436-17955720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr24:19186-19495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr24:19769497-19769224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr24:40592719-40592443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr24:7914014-7913719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr24:27748648-27748375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr24:35675547-35675264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr24:25885150-25885438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 56
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr24:30229481-30229186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:39955042-39955329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr24:42344989-42345293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 296
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr24:36404134-36404431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr24:39808143-39807872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr24:27726004-27726291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr24:28599852-28600141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr24:28700060-28699770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr24:29170971-29170678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr24:15473366-15473065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:17104562-17104859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:19535248-19535536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 62
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:41068268-41067977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr24:44040997-44041302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 76
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:6102838-6102539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr24:8886918-8886624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr24:17860250-17860549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr24:32822763-32823081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
52, 257
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr24:31816586-31816280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 50
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr24:31324293-31323981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr24:6140943-6141270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 249
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr24:13626291-13625976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr24:30178249-30177922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr24:27290879-27290557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr24:34742761-34742428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr24:7917353-7917687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr24:18970500-18970808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr24:20024621-20024283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr24:11887168-11886836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr24:18405302-18405630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr24:27874603-27874276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 62
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr24:29595801-29596137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr24:15057407-15057064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr24:28553546-28553873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr24:41986004-41985639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 53
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:211995-211653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:3430741-3430394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 10
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:3493892-3493565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:5141950-5141606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:5754844-5754513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:23556330-23556656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:27052486-27052819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:27267635-27267310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:27844520-27844848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:28303357-28303678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:28319201-28319534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:28496574-28496916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:28690693-28690366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:28721896-28721552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:29679302-29679640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:32054669-32054343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:32609655-32609310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:33098465-33098815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 305
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:40130137-40129784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr24:44987367-44987702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr24:814253-814591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr24:2675323-2675001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr24:3152569-3152907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr24:29063650-29063975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr24:30235881-30235546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr24:32693727-32693373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
47, 306
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr24:34565131-34564796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr24:5683286-5683088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr24:6487926-6487670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
146, 69
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr24:30314019-30314313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr24:43683458-43683743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:35794728-35795035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr24:18741565-18741886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr24:17311210-17311535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr24:32369908-32370237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr24:201631-201961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 5
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr24:18484987-18485328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 61
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr24:27906445-27906100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr24:29673529-29673191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr24:31309399-31309096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr24:32204788-32205124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr24:19736328-19736490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr24:19800853-19800660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr24:16895431-16895633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr24:10841201-10841442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr24:24457244-24457474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 57
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr24:41980653-41980934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr24:33621475-33621779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 130
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr24:27096696-27096392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr24:18331724-18331411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr24:36173777-36174109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr24:33944407-33944061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr24:27824467-27824214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr24:30483943-30484223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr24:43432795-43432510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
5-144
               

               
Cow position:
               
chr24:27418094-27418230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 66
               

               
Conread position:
               
5-161
               

               
Cow position:
               
chr24:18313937-18314099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr24:32070967-32070797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr24:20943172-20942920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr24:33723838-33724111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr24:42825494-42825759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr24:35074097-35073806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr24:31159623-31159336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr24:40091572-40091867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr24:6507762-6508055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr24:30544858-30545149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr24:43200266-43200570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr24:24755451-24755160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr24:27633416-27633112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr24:35150526-35150203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr24:6150027-6149703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr24:15508536-15508871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr24:34533119-34532795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
141, 50
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr24:29028044-29027720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr24:44054160-44054474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr24:34782783-34782992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr24:17294187-17294464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr24:43364364-43364033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
7-274
               

               
Cow position:
               
chr24:16994885-16994624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr24:40850163-40849885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
7-338
               

               
Cow position:
               
chr24:34272811-34272474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
8-309
               

               
Cow position:
               
chr24:44809252-44808937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
8-335
               

               
Cow position:
               
chr24:43635439-43635105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
8-338
               

               
Cow position:
               
chr24:39218839-39219174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
8-339
               

               
Cow position:
               
chr24:42103375-42103041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
8-342
               

               
Cow position:
               
chr24:24250732-24250392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr24:18390292-18390562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr24:15861598-15861891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
9-301
               

               
Cow position:
               
chr24:6450504-6450217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr24:28062949-28062632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
10-174
               

               
Cow position:
               
chr24:6131870-6132037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr24:18771184-18771416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr24:28327080-28327312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 64
               

               
Conread position:
               
10-337
               

               
Cow position:
               
chr24:34315355-34315032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
11-170
               

               
Cow position:
               
chr24:27552892-27552735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr24:16268129-16268397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
11-322
               

               
Cow position:
               
chr24:35332721-35332407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
11-325
               

               
Cow position:
               
chr24:42007738-42007427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr24:16267770-16267452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 44
               

               
Conread position:
               
11-338
               

               
Cow position:
               
chr24:16625488-16625829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr24:41755860-41755592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr24:14729400-14729105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr24:28354151-28353831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr24:36554837-36555156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
14-173
               

               
Cow position:
               
chr24:27202595-27202434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr24:39259155-39258893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
159, 57
               

               
Conread position:
               
15-338
               

               
Cow position:
               
chr24:27149393-27149079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
16-281
               

               
Cow position:
               
chr24:27968077-27967803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
16-342
               

               
Cow position:
               
chr24:32158279-32158599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
17-338
               

               
Cow position:
               
chr24:28332282-28332606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
18-206
               

               
Cow position:
               
chr24:30226931-30226742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr24:17567375-17567110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
20-146
               

               
Cow position:
               
chr24:29013237-29013115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr24:885699-885890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
20-239
               

               
Cow position:
               
chr24:31382890-31382673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr24:18695608-18695385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr24:24136872-24137162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
22-282
               

               
Cow position:
               
chr24:40184611-40184344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
24-213
               

               
Cow position:
               
chr24:29707809-29708013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
25-272
               

               
Cow position:
               
chr24:5152220-5151967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
29-257
               

               
Cow position:
               
chr24:27207215-27207448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
30-294
               

               
Cow position:
               
chr24:21860243-21860511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
43-292
               

               
Cow position:
               
chr24:27941033-27941296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
62-338
               

               
Cow position:
               
chr24:20969844-20970120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
66-325
               

               
Cow position:
               
chr24:39440603-39440880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
68-336
               

               
Cow position:
               
chr24:21264562-21264832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
72-235
               

               
Cow position:
               
chr24:31388476-31388303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
74-294
               

               
Cow position:
               
chr24:12851658-12851442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
74-294
               

               
Cow position:
               
chr24:29389183-29388960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 203
               

               
Conread position:
               
75-338
               

               
Cow position:
               
chr24:38347625-38347351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 9
               

               
Conread position:
               
76-281
               

               
Cow position:
               
chr24:13626742-13626970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 208
               

               
Conread position:
               
76-283
               

               
Cow position:
               
chr24:25424997-25424784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
76-292
               

               
Cow position:
               
chr24:27719815-27720042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 156
               

               
Conread position:
               
76-338
               

               
Cow position:
               
chr24:40301099-40300828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 240
               

               
Conread position:
               
77-338
               

               
Cow position:
               
chr24:27543538-27543804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
78-294
               

               
Cow position:
               
chr24:591852-591620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
78-334
               

               
Cow position:
               
chr24:3631447-3631193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
79-291
               

               
Cow position:
               
chr24:18324559-18324329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 226
               

               
Conread position:
               
85-336
               

               
Cow position:
               
chr24:25320927-25320666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 220
               

               
Conread position:
               
87-337
               

               
Cow position:
               
chr24:37246282-37246545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 218
               

               
Conread position:
               
93-257
               

               
Cow position:
               
chr24:30776742-30776921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
94-298
               

               
Cow position:
               
chr24:2730651-2730864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
95-275
               

               
Cow position:
               
chr24:21523021-21522828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
105-295
               

               
Cow position:
               
chr24:11007127-11006923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
105-299
               

               
Cow position:
               
chr24:27465670-27465865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
105-319
               

               
Cow position:
               
chr24:39493202-39492984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
49, 200
               

               
Conread position:
               
105-336
               

               
Cow position:
               
chr24:27270689-27270469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
105-338
               

               
Cow position:
               
chr24:33238635-33238877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
105-338
               

               
Cow position:
               
chr24:38375192-38374960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 159
               

               
Conread position:
               
106-284
               

               
Cow position:
               
chr24:6900733-6900544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
106-290
               

               
Cow position:
               
chr24:18333187-18333361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
106-294
               

               
Cow position:
               
chr24:14648444-14648627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
110-291
               

               
Cow position:
               
chr24:6957080-6956889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
130-302
               

               
Cow position:
               
chr24:43832238-43832065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 135
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr24:11874754-11874911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 123
               
Show alignments to all cow chromosomes.