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Cow genome map

           
Conread name:
           
rlin40_n18.y1
        

               
Conread position:
               
1-134
               

               
Cow position:
               
chr25:30450075-30449942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr25:12252779-12252923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr25:1824067-1824208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr25:18201896-18202054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:22730859-22730691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:26679256-26679062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr25:24651423-24651616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 86
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr25:19317296-19317093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr25:21893368-21893163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr25:11315938-11315722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr25:17342488-17342257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr25:21047357-21047123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:17704774-17704545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:20133284-20133520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr25:8157474-8157715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
105, 10
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr25:16714239-16714480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr25:22178947-22178715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr25:34768702-34768934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr25:12319313-12319553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr25:26089783-26090029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr25:14255936-14255700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:25861320-25861586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:6961123-6961380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:10218019-10218281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:12840688-12840954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:23913415-23913152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr25:38425391-38425127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr25:15377357-15377092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr25:21289376-21289099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr25:41132331-41132597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:18988420-18988132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:22241997-22241757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr25:16319110-16319380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
175, 62
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:38135780-38135497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:24669414-24669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr25:31230209-31230478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr25:14513145-14512859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr25:37594436-37594157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:5846779-5847064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:19679385-19679084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:24452130-24452426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:35333188-35332915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:20019969-20020246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
153, 54
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr25:18075694-18075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:20348899-20348588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:28187915-28188216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:35612283-35612570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr25:36081905-36081604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 20
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr25:22203659-22203960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr25:5407772-5407480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:12081292-12081587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:14833634-14833923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:26701060-26700766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 54
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr25:19129885-19129577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr25:17566617-17566312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr25:36535403-36535709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:2046530-2046837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:33256383-33256087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr25:14196893-14196571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr25:20076527-20076203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr25:6463999-6464320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr25:14118125-14117816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
105, 62
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr25:6474057-6474396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr25:18294284-18294610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr25:21894854-21895184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 54
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:15319950-15319621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr25:11585548-11585209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr25:5756718-5756388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr25:8576724-8576388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr25:15273703-15273386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr25:35347934-35347598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
147, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:3145874-3145540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:6891505-6891833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:7641421-7641759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 28
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:8120813-8120471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:9023663-9023339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:11436777-11437108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:11956834-11956521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
301, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:12097870-12097537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 66
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:16921767-16922098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:17658641-17658309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:21951160-21950820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:23053587-23053250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:25753966-25754301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:25827501-25827155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:26087550-26087209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:27868840-27868504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:33663875-33664202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
166, 62
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:33959222-33959566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr25:40321257-40321614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 150
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:9957008-9957344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 48
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:18564517-18564185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:20008163-20007811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:24136406-24136746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr25:24504471-24504609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr25:30816918-30816774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr25:22750978-22751157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr25:13387837-13387614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr25:13272598-13272363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr25:26338487-26338210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr25:1735291-1735560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr25:33260761-33260488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr25:20785557-20785836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr25:7581402-7581685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr25:1838270-1837973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr25:9754067-9754349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr25:21267020-21266732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr25:2414844-2414531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr25:14791786-14791450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 60
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr25:36036750-36037096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 61
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr25:9396475-9396146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr25:13443383-13443566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr25:18905913-18905692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr25:61678-61421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr25:36762133-36761810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 47
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr25:35340359-35340031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr25:20496560-20496233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr25:26654939-26654601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr25:30319422-30319755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr25:36779529-36779190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
3-339
               

               
Cow position:
               
chr25:16867266-16866925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr25:21245576-21245916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr25:12997621-12997450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr25:13672422-13672195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr25:41107782-41107458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr25:10643282-10643614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr25:18894693-18894907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr25:9269374-9269111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr25:38982124-38981846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:10504311-10504634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr25:13569145-13569473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr25:20069747-20069418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
5-340
               

               
Cow position:
               
chr25:23410694-23410357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr25:20624905-20625239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr25:12755462-12755686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr25:26269912-26270143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
7-165
               

               
Cow position:
               
chr25:3373355-3373505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
7-178
               

               
Cow position:
               
chr25:8961796-8961627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr25:27801306-27801089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 45
               

               
Conread position:
               
7-278
               

               
Cow position:
               
chr25:18293777-18293505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr25:11131608-11131318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chr25:22296997-22297290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
8-174
               

               
Cow position:
               
chr25:30619087-30618924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
8-194
               

               
Cow position:
               
chr25:24202977-24203153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr25:31732314-31732493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr25:21042408-21042191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
9-253
               

               
Cow position:
               
chr25:36017564-36017312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr25:12817397-12817067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr25:17354389-17354073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr25:22531305-22530981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr25:31732712-31733042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr25:20211059-20211336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr25:788285-788004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr25:36033457-36033206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
12-296
               

               
Cow position:
               
chr25:36124704-36124429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 137
               

               
Conread position:
               
14-178
               

               
Cow position:
               
chr25:7299196-7299362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
14-230
               

               
Cow position:
               
chr25:13294908-13294702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chr25:13380595-13380853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr25:35625172-35625440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 37
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr25:23917858-23917566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
19-342
               

               
Cow position:
               
chr25:12204488-12204160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
20-274
               

               
Cow position:
               
chr25:4002813-4002548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr25:9961162-9961436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr25:13642301-13642574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr25:16001514-16001779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr25:5515025-5514737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr25:30035560-30035284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
20-302
               

               
Cow position:
               
chr25:12824006-12824291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
21-290
               

               
Cow position:
               
chr25:10138104-10137834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
22-298
               

               
Cow position:
               
chr25:35345040-35344764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
23-318
               

               
Cow position:
               
chr25:41363974-41364273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
26-141
               

               
Cow position:
               
chr25:12691673-12691790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
26-228
               

               
Cow position:
               
chr25:14945445-14945644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
32-245
               

               
Cow position:
               
chr25:12899758-12899536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
33-265
               

               
Cow position:
               
chr25:7329547-7329305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
43-284
               

               
Cow position:
               
chr25:7306293-7306040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr25:15254364-15254588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
63-291
               

               
Cow position:
               
chr25:23389303-23389542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
16, 160
               

               
Conread position:
               
65-199
               

               
Cow position:
               
chr25:23323178-23323033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
66-210
               

               
Cow position:
               
chr25:20789531-20789675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
67-284
               

               
Cow position:
               
chr25:10365781-10366009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 225
               

               
Conread position:
               
67-296
               

               
Cow position:
               
chr25:6424617-6424855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
69-339
               

               
Cow position:
               
chr25:2111037-2110776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
73-260
               

               
Cow position:
               
chr25:6255971-6256172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
74-278
               

               
Cow position:
               
chr25:36026973-36026755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr25:33839343-33839092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
75-322
               

               
Cow position:
               
chr25:11139611-11139350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
76-219
               

               
Cow position:
               
chr25:35110163-35110323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
76-278
               

               
Cow position:
               
chr25:2194905-2194695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr25:16400300-16400508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
77-342
               

               
Cow position:
               
chr25:20395153-20394897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
78-338
               

               
Cow position:
               
chr25:17975413-17975673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr25:35607777-35608032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
98-276
               

               
Cow position:
               
chr25:40658238-40658050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
102-342
               

               
Cow position:
               
chr25:7446082-7445843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
105-250
               

               
Cow position:
               
chr25:2596115-2595953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
105-272
               

               
Cow position:
               
chr25:24008245-24008423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
105-294
               

               
Cow position:
               
chr25:20060097-20060301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
105-302
               

               
Cow position:
               
chr25:24167972-24168174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
105-323
               

               
Cow position:
               
chr25:18491004-18490781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 192
               

               
Conread position:
               
105-328
               

               
Cow position:
               
chr25:448415-448641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 187
               

               
Conread position:
               
105-334
               

               
Cow position:
               
chr25:27821345-27821108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 194
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr25:8347438-8347206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
41, 189
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr25:27622018-27621779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
107-297
               

               
Cow position:
               
chr25:17712464-17712263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
110-261
               

               
Cow position:
               
chr25:16316818-16316662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
117-334
               

               
Cow position:
               
chr25:36120118-36119899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
164-292
               

               
Cow position:
               
chr25:22730503-22730376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
166-302
               

               
Cow position:
               
chr25:8961324-8961184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               
Show alignments to all cow chromosomes.