Cow genome map


           Conread name:
           rlin40_n18.y1
        

               Conread position:
               1-152
               

               Cow position:
               chr26:6486602-6486753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-171
               

               Cow position:
               chr26:7315060-7315222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               114, 17
               

               Conread position:
               1-172
               

               Cow position:
               chr26:12893378-12893542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-173
               

               Cow position:
               chr26:11270284-11270126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-174
               

               Cow position:
               chr26:33074448-33074622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               110, 41
               

               Conread position:
               1-174
               

               Cow position:
               chr26:33253267-33253444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-175
               

               Cow position:
               chr26:12237980-12238147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               147, 20
               

               Conread position:
               1-176
               

               Cow position:
               chr26:23671465-23671288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-178
               

               Cow position:
               chr26:14905759-14905938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               105, 62
               

               Conread position:
               1-186
               

               Cow position:
               chr26:22152276-22152087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               1-188
               

               Cow position:
               chr26:31633777-31633587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-190
               

               Cow position:
               chr26:6865073-6864881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 159
               

               Conread position:
               1-197
               

               Cow position:
               chr26:32834530-32834720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               1-199
               

               Cow position:
               chr26:586830-587026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               1-215
               

               Cow position:
               chr26:22249428-22249652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 53
               

               Conread position:
               1-222
               

               Cow position:
               chr26:22354462-22354236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-222
               

               Cow position:
               chr26:30568614-30568833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               1-223
               

               Cow position:
               chr26:829854-829630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               1-223
               

               Cow position:
               chr26:23315822-23315588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               1-224
               

               Cow position:
               chr26:10965545-10965754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               175, 62
               

               Conread position:
               1-231
               

               Cow position:
               chr26:14175331-14175095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               1-236
               

               Cow position:
               chr26:6252906-6252656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               1-237
               

               Cow position:
               chr26:4167304-4167548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               1-242
               

               Cow position:
               chr26:34060382-34060137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-243
               

               Cow position:
               chr26:19446182-19445939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               1-244
               

               Cow position:
               chr26:20013527-20013280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-249
               

               Cow position:
               chr26:2987030-2987275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-253
               

               Cow position:
               chr26:25526298-25526038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 62
               

               Conread position:
               1-257
               

               Cow position:
               chr26:10764261-10764007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               175, 62
               

               Conread position:
               1-261
               

               Cow position:
               chr26:33857145-33857414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               110, 62
               

               Conread position:
               1-266
               

               Cow position:
               chr26:6006005-6006267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               1-266
               

               Cow position:
               chr26:15211852-15211594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               1-266
               

               Cow position:
               chr26:21636988-21637258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               147, 54
               

               Conread position:
               1-268
               

               Cow position:
               chr26:23000988-23001268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               1-272
               

               Cow position:
               chr26:33744953-33744662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-274
               

               Cow position:
               chr26:26200886-26200616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               1-275
               

               Cow position:
               chr26:32815741-32816013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               1-277
               

               Cow position:
               chr26:5360930-5361188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               148, 54
               

               Conread position:
               1-278
               

               Cow position:
               chr26:6794194-6793907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 53
               

               Conread position:
               1-281
               

               Cow position:
               chr26:12669249-12668964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               1-283
               

               Cow position:
               chr26:32553743-32553443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               1-284
               

               Cow position:
               chr26:7148256-7148537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               175, 54
               

               Conread position:
               1-287
               

               Cow position:
               chr26:17057727-17057442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               1-290
               

               Cow position:
               chr26:21992151-21991871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-291
               

               Cow position:
               chr26:3071926-3072209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               1-291
               

               Cow position:
               chr26:4854594-4854289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 77
               

               Conread position:
               1-295
               

               Cow position:
               chr26:8811176-8810882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               1-296
               

               Cow position:
               chr26:13021096-13021400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 54
               

               Conread position:
               1-296
               

               Cow position:
               chr26:29333142-29332849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               110, 52
               

               Conread position:
               1-297
               

               Cow position:
               chr26:23097135-23097430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 27
               

               Conread position:
               1-298
               

               Cow position:
               chr26:613626-613926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 62
               

               Conread position:
               1-302
               

               Cow position:
               chr26:9104232-9104538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 61
               

               Conread position:
               1-304
               

               Cow position:
               chr26:32897820-32898130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               1-308
               

               Cow position:
               chr26:35704437-35704122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               1-317
               

               Cow position:
               chr26:33566995-33567311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 29
               

               Conread position:
               1-321
               

               Cow position:
               chr26:26294147-26294465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               1-323
               

               Cow position:
               chr26:4363349-4363033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               1-330
               

               Cow position:
               chr26:23599747-23600076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 55
               

               Conread position:
               1-331
               

               Cow position:
               chr26:32013682-32013350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-332
               

               Cow position:
               chr26:11263692-11263353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               1-336
               

               Cow position:
               chr26:2531133-2531459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-336
               

               Cow position:
               chr26:6037384-6037725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 56
               

               Conread position:
               1-336
               

               Cow position:
               chr26:16550033-16549698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-337
               

               Cow position:
               chr26:9604611-9604256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               64, 99
               

               Conread position:
               1-337
               

               Cow position:
               chr26:21418403-21418739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               1-338
               

               Cow position:
               chr26:3706841-3706516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr26:4585161-4585497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr26:6714253-6714570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               1-338
               

               Cow position:
               chr26:8353018-8352672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 275
               

               Conread position:
               1-338
               

               Cow position:
               chr26:8699998-8700337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr26:14174349-14174009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               1-338
               

               Cow position:
               chr26:16166866-16167197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr26:27163499-27163154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               152, 74
               

               Conread position:
               1-338
               

               Cow position:
               chr26:27491449-27491789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 71
               

               Conread position:
               1-338
               

               Cow position:
               chr26:32601399-32601064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               1-338
               

               Cow position:
               chr26:32776457-32776793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr26:33202021-33202345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               143, 61
               

               Conread position:
               1-339
               

               Cow position:
               chr26:6475378-6475714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 62
               

               Conread position:
               1-339
               

               Cow position:
               chr26:12155072-12155396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               88, 43
               

               Conread position:
               1-339
               

               Cow position:
               chr26:33045130-33044796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 62
               

               Conread position:
               1-342
               

               Cow position:
               chr26:20256880-20256554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               245
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               1-342
               

               Cow position:
               chr26:32955584-32955911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               102, 64
               

               Conread position:
               2-228
               

               Cow position:
               chr26:32672389-32672623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               104, 47
               

               Conread position:
               2-237
               

               Cow position:
               chr26:17148754-17148508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               99, 42
               

               Conread position:
               2-297
               

               Cow position:
               chr26:16604335-16604033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               107, 70
               

               Conread position:
               2-329
               

               Cow position:
               chr26:7642525-7642855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               2-338
               

               Cow position:
               chr26:10208915-10209272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               2-338
               

               Cow position:
               chr26:11370960-11370645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               172, 53
               

               Conread position:
               2-338
               

               Cow position:
               chr26:32670447-32670781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 60
               

               Conread position:
               2-338
               

               Cow position:
               chr26:32683164-32682827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               2-339
               

               Cow position:
               chr26:5246430-5246777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 50
               

               Conread position:
               2-339
               

               Cow position:
               chr26:21859872-21859530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 61
               

               Conread position:
               3-231
               

               Cow position:
               chr26:35449110-35448877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               103, 52
               

               Conread position:
               3-290
               

               Cow position:
               chr26:15200466-15200769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               3-335
               

               Cow position:
               chr26:16796182-16796514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 52
               

               Conread position:
               3-338
               

               Cow position:
               chr26:6188351-6188009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 292
               

               Conread position:
               3-338
               

               Cow position:
               chr26:17401810-17401476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               144, 52
               

               Conread position:
               4-260
               

               Cow position:
               chr26:8186706-8186435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               5-144
               

               Cow position:
               chr26:4807603-4807471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               100, 50
               

               Conread position:
               5-172
               

               Cow position:
               chr26:20551193-20551022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               5-223
               

               Cow position:
               chr26:10974176-10973937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 173
               

               Conread position:
               5-264
               

               Cow position:
               chr26:8642993-8642739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               5-273
               

               Cow position:
               chr26:19774254-19774531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               5-282
               

               Cow position:
               chr26:32058696-32058416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 11
               

               Conread position:
               5-282
               

               Cow position:
               chr26:34256357-34256050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               5-284
               

               Cow position:
               chr26:10767867-10768139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 41
               

               Conread position:
               5-291
               

               Cow position:
               chr26:8745777-8746081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 7
               

               Conread position:
               5-295
               

               Cow position:
               chr26:26790-27078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 50
               

               Conread position:
               5-296
               

               Cow position:
               chr26:26466683-26466969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 50
               

               Conread position:
               5-337
               

               Cow position:
               chr26:3756272-3755955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               122, 39
               

               Conread position:
               5-338
               

               Cow position:
               chr26:34108804-34108484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               5-339
               

               Cow position:
               chr26:33011623-33011954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               6-275
               

               Cow position:
               chr26:21243146-21242874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 49
               

               Conread position:
               6-329
               

               Cow position:
               chr26:21912844-21912510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               6-338
               

               Cow position:
               chr26:12807483-12807801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 37
               

               Conread position:
               7-278
               

               Cow position:
               chr26:31779525-31779241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 48
               

               Conread position:
               7-297
               

               Cow position:
               chr26:20260631-20260337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 212
               

               Conread position:
               7-302
               

               Cow position:
               chr26:32865849-32866146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               151, 65
               

               Conread position:
               8-278
               

               Cow position:
               chr26:18692463-18692202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               8-338
               

               Cow position:
               chr26:25394075-25393745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 55
               

               Conread position:
               13-178
               

               Cow position:
               chr26:8819821-8819991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               97, 47
               

               Conread position:
               14-260
               

               Cow position:
               chr26:10747594-10747825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 23
               

               Conread position:
               14-284
               

               Cow position:
               chr26:3181903-3182188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 60
               

               Conread position:
               14-320
               

               Cow position:
               chr26:25737507-25737202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               16-334
               

               Cow position:
               chr26:9082196-9082514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 9
               

               Conread position:
               17-338
               

               Cow position:
               chr26:6498291-6497969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               18-241
               

               Cow position:
               chr26:20448994-20448775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               86, 44
               

               Conread position:
               18-338
               

               Cow position:
               chr26:27063638-27063957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               19-301
               

               Cow position:
               chr26:9850066-9850347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               82, 44
               

               Conread position:
               19-301
               

               Cow position:
               chr26:9853576-9853857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               82, 44
               

               Conread position:
               19-338
               

               Cow position:
               chr26:6447566-6447894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 46
               

               Conread position:
               20-240
               

               Cow position:
               chr26:27761626-27761845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               126, 43
               

               Conread position:
               20-302
               

               Cow position:
               chr26:14957989-14958272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               129, 35
               

               Conread position:
               24-284
               

               Cow position:
               chr26:24280850-24280590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               119, 39
               

               Conread position:
               25-294
               

               Cow position:
               chr26:23925960-23926228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               28-338
               

               Cow position:
               chr26:7525451-7525765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               29-240
               

               Cow position:
               chr26:10608274-10608064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 34
               

               Conread position:
               42-338
               

               Cow position:
               chr26:20182775-20182476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               58-283
               

               Cow position:
               chr26:21351687-21351450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               63-285
               

               Cow position:
               chr26:31062189-31061960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               72-337
               

               Cow position:
               chr26:30806520-30806798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               35, 233
               

               Conread position:
               72-337
               

               Cow position:
               chr26:31701807-31701529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               35, 233
               

               Conread position:
               74-294
               

               Cow position:
               chr26:32026383-32026609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 139
               

               Conread position:
               74-295
               

               Cow position:
               chr26:27594616-27594395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 162
               

               Conread position:
               74-335
               

               Cow position:
               chr26:18231350-18231084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               35, 118
               

               Conread position:
               75-280
               

               Cow position:
               chr26:7224649-7224852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               76-258
               

               Cow position:
               chr26:32571066-32570876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               82-339
               

               Cow position:
               chr26:7961607-7961344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               29, 186
               

               Conread position:
               83-319
               

               Cow position:
               chr26:2029567-2029825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 239
               

               Conread position:
               84-338
               

               Cow position:
               chr26:28442036-28442297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 184
               

               Conread position:
               97-191
               

               Cow position:
               chr26:20490046-20490144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               97-264
               

               Cow position:
               chr26:5988770-5988940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               97-339
               

               Cow position:
               chr26:31890051-31889803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               9, 172
               

               Conread position:
               101-342
               

               Cow position:
               chr26:4664480-4664718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               102-339
               

               Cow position:
               chr26:2603644-2603884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               105-240
               

               Cow position:
               chr26:24629691-24629550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 101
               

               Conread position:
               105-286
               

               Cow position:
               chr26:6793891-6793700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               105-338
               

               Cow position:
               chr26:13270725-13270965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               39, 194
               

               Conread position:
               105-338
               

               Cow position:
               chr26:19447476-19447722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               44, 155
               

               Conread position:
               107-288
               

               Cow position:
               chr26:30034460-30034649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               118-282
               

               Cow position:
               chr26:4293096-4293257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               136-287
               

               Cow position:
               chr26:19478480-19478328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               136-338
               

               Cow position:
               chr26:13774398-13774212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               145-297
               

               Cow position:
               chr26:2994772-2994924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               151-324
               

               Cow position:
               chr26:12655005-12654828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 153
               

               Conread position:
               155-338
               

               Cow position:
               chr26:31137834-31138010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               11, 70
               
Show alignments to all cow chromosomes.