Cow genome map

Conread name: rlin40_n18.y1

Conread position: 1-109
Cow position: chr6:8094217-8094320 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-143
Cow position: chr6:37395329-37395475 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 1-147
Cow position: chr6:5413894-5413752 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 54

Conread position: 1-160
Cow position: chr6:143303-143454 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 109, 18

Conread position: 1-160
Cow position: chr6:37463094-37462936 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 147, 54

Conread position: 1-163
Cow position: chr6:6673174-6673013 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 105, 58

Conread position: 1-165
Cow position: chr6:10487660-10487496 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 105, 53

Conread position: 1-168
Cow position: chr6:17548902-17549075 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 1-170
Cow position: chr6:7119547-7119706 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-170
Cow position: chr6:21235115-21234948 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 61

Conread position: 1-174
Cow position: chr6:1429712-1429539 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 105, 59

Conread position: 1-174
Cow position: chr6:44127683-44127506 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 62

Conread position: 1-174
Cow position: chr6:58370830-58370653 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 104, 65

Conread position: 1-174
Cow position: chr6:58597434-58597604 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 71

Conread position: 1-178
Cow position: chr6:36645457-36645283 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 17

Conread position: 1-181
Cow position: chr6:59718869-59718688 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 62

Conread position: 1-194
Cow position: chr6:23401920-23402115 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 54

Conread position: 1-197
Cow position: chr6:32287711-32287511 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 63

Conread position: 1-198
Cow position: chr6:48803561-48803767 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 54

Conread position: 1-199
Cow position: chr6:54573331-54573118 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 198

Conread position: 1-200
Cow position: chr6:62669937-62669742 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 106, 54

Conread position: 1-204
Cow position: chr6:17313807-17313599 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 105, 54

Conread position: 1-204
Cow position: chr6:60118222-60118010 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 105, 61

Conread position: 1-205
Cow position: chr6:377196-377000 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 54

Conread position: 1-207
Cow position: chr6:582200-582406 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 105, 62

Conread position: 1-220
Cow position: chr6:4691903-4692136 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 54

Conread position: 1-222
Cow position: chr6:19446325-19446106 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 147, 54

Conread position: 1-224
Cow position: chr6:60740086-60739859 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 54

Conread position: 1-228
Cow position: chr6:27888423-27888188 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 65

Conread position: 1-228
Cow position: chr6:55763925-55763694 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 106, 17

Conread position: 1-230
Cow position: chr6:12542858-12543095 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 105, 54

Conread position: 1-231
Cow position: chr6:14914164-14914402 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 105, 29

Conread position: 1-231
Cow position: chr6:59109017-59108779 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 54

Conread position: 1-232
Cow position: chr6:47640360-47640601 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 63

Conread position: 1-234
Cow position: chr6:15447126-15447374 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 109, 71

Conread position: 1-234
Cow position: chr6:16764579-16764808 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 60

Conread position: 1-234
Cow position: chr6:19013143-19012903 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 96, 54

Conread position: 1-237
Cow position: chr6:11246836-11246595 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 20

Conread position: 1-239
Cow position: chr6:39093823-39093573 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 194

Conread position: 1-240
Cow position: chr6:17333981-17334229 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 69

Conread position: 1-241
Cow position: chr6:12669171-12668934 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 106, 23

Conread position: 1-241
Cow position: chr6:40761197-40760961 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 36

Conread position: 1-243
Cow position: chr6:8125398-8125157 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 62

Conread position: 1-243
Cow position: chr6:59104671-59104433 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 90, 54

Conread position: 1-247
Cow position: chr6:1703876-1703635 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 147, 61

Conread position: 1-247
Cow position: chr6:52901310-52901062 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 54

Conread position: 1-249
Cow position: chr6:32517808-32518054 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 47, 92

Conread position: 1-249
Cow position: chr6:47574978-47574724 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 106, 52

Conread position: 1-252
Cow position: chr6:25008790-25008530 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 91

Conread position: 1-253
Cow position: chr6:45596460-45596719 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 71

Conread position: 1-256
Cow position: chr6:47799365-47799110 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 89, 53

Conread position: 1-259
Cow position: chr6:47355895-47355633 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 148, 54

Conread position: 1-261
Cow position: chr6:53519552-53519816 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 93, 54

Conread position: 1-262
Cow position: chr6:29485154-29484897 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 145, 51

Conread position: 1-263
Cow position: chr6:21456611-21456885 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 52

Conread position: 1-263
Cow position: chr6:46292276-46292533 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 25

Conread position: 1-263
Cow position: chr6:52412931-52412659 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 29

Conread position: 1-264
Cow position: chr6:7128331-7128598 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 62

Conread position: 1-264
Cow position: chr6:16191750-16191471 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 105, 70

Conread position: 1-264
Cow position: chr6:16423774-16423503 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 62

Conread position: 1-266
Cow position: chr6:416180-415897 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 273

Conread position: 1-266
Cow position: chr6:12091921-12092182 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 105, 62

Conread position: 1-266
Cow position: chr6:46865520-46865791 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 61

Conread position: 1-266
Cow position: chr6:48187511-48187779 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 67

Conread position: 1-267
Cow position: chr6:55546103-55546359 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 102, 65

Conread position: 1-270
Cow position: chr6:528212-528478 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 145, 54

Conread position: 1-270
Cow position: chr6:10399834-10400097 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 147, 18

Conread position: 1-270
Cow position: chr6:15937783-15938054 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 48

Conread position: 1-271
Cow position: chr6:6401026-6400745 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 62

Conread position: 1-273
Cow position: chr6:445395-445106 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 62

Conread position: 1-273
Cow position: chr6:15782442-15782730 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 56

Conread position: 1-273
Cow position: chr6:20157405-20157120 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 67

Conread position: 1-274
Cow position: chr6:5113977-5114254 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 54

Conread position: 1-276
Cow position: chr6:7989343-7989621 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 70

Conread position: 1-276
Cow position: chr6:21231596-21231329 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 61

Conread position: 1-278
Cow position: chr6:67456790-67456493 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 54

Conread position: 1-279
Cow position: chr6:12652280-12651993 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 64

Conread position: 1-281
Cow position: chr6:37149261-37148985 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 65

Conread position: 1-283
Cow position: chr6:17997248-17997530 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 11

Conread position: 1-284
Cow position: chr6:8966169-8965874 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 1-284
Cow position: chr6:26915403-26915114 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 110, 61

Conread position: 1-284
Cow position: chr6:50090714-50090424 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 153, 70

Conread position: 1-284
Cow position: chr6:61113839-61113534 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 22

Conread position: 1-289
Cow position: chr6:6063222-6063500 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 54

Conread position: 1-289
Cow position: chr6:51893428-51893734 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 54

Conread position: 1-289
Cow position: chr6:54368832-54369120 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 62

Conread position: 1-290
Cow position: chr6:10176230-10176523 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 55

Conread position: 1-290
Cow position: chr6:29240013-29239721 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 53

Conread position: 1-290
Cow position: chr6:38207418-38207717 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 46

Conread position: 1-291
Cow position: chr6:19681453-19681743 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 146, 66

Conread position: 1-291
Cow position: chr6:56350246-56349946 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 53

Conread position: 1-294
Cow position: chr6:64432009-64431711 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 63

Conread position: 1-295
Cow position: chr6:54600420-54600144 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 75

Conread position: 1-296
Cow position: chr6:11637684-11637973 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 106, 56

Conread position: 1-296
Cow position: chr6:50984294-50983980 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 105, 54

Conread position: 1-296
Cow position: chr6:55475327-55475022 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 62

Conread position: 1-297
Cow position: chr6:13367357-13367066 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 173, 62

Conread position: 1-297
Cow position: chr6:21111023-21110741 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 62

Conread position: 1-297
Cow position: chr6:56376276-56376576 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 105, 56

Conread position: 1-298
Cow position: chr6:15300757-15301047 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 54

Conread position: 1-298
Cow position: chr6:18048952-18049255 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 105, 54

Conread position: 1-298
Cow position: chr6:28976968-28977261 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 62

Conread position: 1-298
Cow position: chr6:38441244-38440952 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 17

Conread position: 1-298
Cow position: chr6:45064945-45065236 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 53

Conread position: 1-298
Cow position: chr6:53460495-53460801 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 80

Conread position: 1-298
Cow position: chr6:54490661-54490970 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-298
Cow position: chr6:66434022-66433718 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 86

Conread position: 1-302
Cow position: chr6:3929391-3929087 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 53

Conread position: 1-302
Cow position: chr6:8787965-8788270 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 69

Conread position: 1-302
Cow position: chr6:14949409-14949715 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 54

Conread position: 1-302
Cow position: chr6:68049503-68049202 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 62

Conread position: 1-303
Cow position: chr6:7824838-7824528 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 105, 71

Conread position: 1-303
Cow position: chr6:16746415-16746105 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 105, 74

Conread position: 1-303
Cow position: chr6:21542395-21542087 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 62

Conread position: 1-303
Cow position: chr6:44194477-44194780 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 54

Conread position: 1-308
Cow position: chr6:66874423-66874125 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 29

Conread position: 1-314
Cow position: chr6:15305643-15305340 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 147, 51

Conread position: 1-315
Cow position: chr6:32126128-32125817 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 107, 54

Conread position: 1-316
Cow position: chr6:3952590-3952279 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 62

Conread position: 1-317
Cow position: chr6:34196078-34196395 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 1-322
Cow position: chr6:15242908-15242588 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 56

Conread position: 1-322
Cow position: chr6:31526118-31525796 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 26

Conread position: 1-324
Cow position: chr6:38771356-38771040 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 6

Conread position: 1-325
Cow position: chr6:50445696-50446018 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 17

Conread position: 1-325
Cow position: chr6:54140869-54140559 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 55

Conread position: 1-326
Cow position: chr6:40774260-40774605 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 324

Conread position: 1-328
Cow position: chr6:28483087-28482758 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 54

Conread position: 1-328
Cow position: chr6:53932778-53933094 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 10

Conread position: 1-330
Cow position: chr6:48282064-48281739 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 69

Conread position: 1-334
Cow position: chr6:6343498-6343166 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 54

Conread position: 1-334
Cow position: chr6:51835471-51835140 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 1-335
Cow position: chr6:18961443-18961783 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 96, 62

Conread position: 1-336
Cow position: chr6:5095470-5095816 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 1-336
Cow position: chr6:16707087-16706748 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 76

Conread position: 1-336
Cow position: chr6:28148328-28147989 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 56

Conread position: 1-336
Cow position: chr6:42519061-42518712 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 21, 60

Conread position: 1-336
Cow position: chr6:44078589-44078254 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 11

Conread position: 1-336
Cow position: chr6:47339284-47339618 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 1-337
Cow position: chr6:8562794-8562453 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 109, 62

Conread position: 1-337
Cow position: chr6:36652494-36652165 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 105, 71

Conread position: 1-337
Cow position: chr6:56843229-56842897 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 58, 52

Conread position: 1-338
Cow position: chr6:323233-323574 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 90

Conread position: 1-338
Cow position: chr6:1770126-1770459 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 105, 46

Conread position: 1-338
Cow position: chr6:6060500-6060821 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 55

Conread position: 1-338
Cow position: chr6:9750982-9751309 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 54

Conread position: 1-338
Cow position: chr6:12338065-12337721 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 56

Conread position: 1-338
Cow position: chr6:12551341-12551004 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 5

Conread position: 1-338
Cow position: chr6:16700333-16699998 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 1-338
Cow position: chr6:17248790-17248468 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 175, 70

Conread position: 1-338
Cow position: chr6:18447445-18447772 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 122, 12

Conread position: 1-338
Cow position: chr6:23696072-23695734 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 62

Conread position: 1-338
Cow position: chr6:27239934-27240242 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 54

Conread position: 1-338
Cow position: chr6:34549474-34549145 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 71

Conread position: 1-338
Cow position: chr6:35103256-35103588 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 29

Conread position: 1-338
Cow position: chr6:35181185-35181516 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 40

Conread position: 1-338
Cow position: chr6:35471437-35471790 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 306

Conread position: 1-338
Cow position: chr6:35613346-35613691 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 66

Conread position: 1-338
Cow position: chr6:35842730-35842397 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 106, 41

Conread position: 1-338
Cow position: chr6:40032262-40031930 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 13

Conread position: 1-338
Cow position: chr6:40713431-40713762 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 62

Conread position: 1-338
Cow position: chr6:42565760-42565422 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 1-338
Cow position: chr6:46465893-46465564 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 105, 62

Conread position: 1-338
Cow position: chr6:46558129-46557794 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 98, 69

Conread position: 1-338
Cow position: chr6:47305413-47305064 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 66

Conread position: 1-338
Cow position: chr6:50747070-50746713 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 250

Conread position: 1-338
Cow position: chr6:51387821-51387502 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 171, 48

Conread position: 1-338
Cow position: chr6:54867589-54867248 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 1-338
Cow position: chr6:60057583-60057929 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 76

Conread position: 1-338
Cow position: chr6:60474202-60473870 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 90, 47

Conread position: 1-338
Cow position: chr6:62924924-62925257 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 56

Conread position: 1-338
Cow position: chr6:63272539-63272881 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 153, 62

Conread position: 1-338
Cow position: chr6:66363163-66363508 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 46, 54

Conread position: 1-338
Cow position: chr6:67214821-67214478 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 70

Conread position: 1-338
Cow position: chr6:67968538-67968894 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 106, 54

Conread position: 1-339
Cow position: chr6:6067630-6067953 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 54

Conread position: 1-339
Cow position: chr6:24004608-24004282 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 53

Conread position: 1-339
Cow position: chr6:31635615-31635952 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 66

Conread position: 1-339
Cow position: chr6:44371873-44372208 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 105, 40

Conread position: 1-341
Cow position: chr6:40450830-40450503 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 29

Conread position: 1-342
Cow position: chr6:611622-611299 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 41

Conread position: 1-342
Cow position: chr6:6943607-6943945 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 62

Conread position: 1-342
Cow position: chr6:36470490-36470833 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 64

Conread position: 1-342
Cow position: chr6:47384078-47383733 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 152, 64

Conread position: 1-342
Cow position: chr6:54365256-54365591 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 51

Conread position: 1-342
Cow position: chr6:61515116-61515465 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 1-342
Cow position: chr6:63047664-63047308 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 306

Conread position: 1-342
Cow position: chr6:65871109-65870756 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 300

Conread position: 1-342
Cow position: chr6:66531749-66532070 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 54

Conread position: 2-210
Cow position: chr6:19996685-19996478 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 105, 32

Conread position: 2-213
Cow position: chr6:16316384-16316166 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 69, 57

Conread position: 2-216
Cow position: chr6:46282933-46283146 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 146, 73

Conread position: 2-221
Cow position: chr6:61608583-61608354 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 53

Conread position: 2-231
Cow position: chr6:15243326-15243088 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 54

Conread position: 2-256
Cow position: chr6:65259417-65259655 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 47

Conread position: 2-267
Cow position: chr6:6994880-6995146 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 101, 71

Conread position: 2-267
Cow position: chr6:63298960-63299222 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 105, 53

Conread position: 2-271
Cow position: chr6:66131377-66131105 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 9

Conread position: 2-278
Cow position: chr6:23532728-23532453 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 69

Conread position: 2-278
Cow position: chr6:50271035-50271304 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 127, 10

Conread position: 2-278
Cow position: chr6:57405054-57405334 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 104, 53

Conread position: 2-284
Cow position: chr6:54430901-54430603 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 46, 69

Conread position: 2-291
Cow position: chr6:20097888-20098187 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 72

Conread position: 2-293
Cow position: chr6:27110668-27110366 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 17

Conread position: 2-296
Cow position: chr6:58590093-58589805 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 65

Conread position: 2-298
Cow position: chr6:9452699-9452999 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 54

Conread position: 2-303
Cow position: chr6:65903553-65903851 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 174, 70

Conread position: 2-338
Cow position: chr6:29077806-29077464 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 76

Conread position: 2-338
Cow position: chr6:35990165-35990492 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 53

Conread position: 2-338
Cow position: chr6:57164500-57164163 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 53

Conread position: 2-342
Cow position: chr6:9008541-9008875 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 53

Conread position: 2-342
Cow position: chr6:37634862-37634522 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 3-210
Cow position: chr6:38610038-38609826 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 52

Conread position: 3-217
Cow position: chr6:9219342-9219124 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 104, 52

Conread position: 3-220
Cow position: chr6:19292871-19292660 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 46

Conread position: 3-224
Cow position: chr6:27815402-27815625 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 66

Conread position: 3-242
Cow position: chr6:35993654-35993403 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 103, 60

Conread position: 3-243
Cow position: chr6:30974116-30973866 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 139, 52

Conread position: 3-259
Cow position: chr6:63251853-63252114 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 82

Conread position: 3-269
Cow position: chr6:59069554-59069829 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 103, 52

Conread position: 3-270
Cow position: chr6:28318470-28318207 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 53

Conread position: 3-284
Cow position: chr6:242872-242598 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 101, 52

Conread position: 3-291
Cow position: chr6:5302349-5302627 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 57

Conread position: 3-292
Cow position: chr6:7190049-7190343 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 41

Conread position: 3-296
Cow position: chr6:6264722-6264416 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 270

Conread position: 3-302
Cow position: chr6:60350222-60350533 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 53

Conread position: 3-338
Cow position: chr6:24031449-24031111 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 52

Conread position: 3-338
Cow position: chr6:25407322-25407670 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 52

Conread position: 3-338
Cow position: chr6:28477239-28476914 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 145, 65

Conread position: 3-338
Cow position: chr6:44099157-44098824 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 52

Conread position: 3-342
Cow position: chr6:48170008-48169677 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 108, 52

Conread position: 4-243
Cow position: chr6:59798720-59798493 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 17

Conread position: 4-294
Cow position: chr6:24652125-24652408 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 83, 50

Conread position: 4-297
Cow position: chr6:61631540-61631850 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 58

Conread position: 5-146
Cow position: chr6:54364930-54365073 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 101, 60

Conread position: 5-174
Cow position: chr6:20196231-20196393 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 50

Conread position: 5-227
Cow position: chr6:30688547-30688766 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 49

Conread position: 5-243
Cow position: chr6:9839240-9838987 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 50

Conread position: 5-264
Cow position: chr6:3545763-3545508 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 51

Conread position: 5-264
Cow position: chr6:32268816-32269066 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 149, 50

Conread position: 5-274
Cow position: chr6:38641565-38641292 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 50

Conread position: 5-279
Cow position: chr6:54864588-54864877 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 41

Conread position: 5-283
Cow position: chr6:35436062-35435788 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 102, 61

Conread position: 5-284
Cow position: chr6:38614887-38614608 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 58

Conread position: 5-287
Cow position: chr6:37199459-37199768 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 102, 58

Conread position: 5-293
Cow position: chr6:5445691-5445404 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 56

Conread position: 5-294
Cow position: chr6:3978594-3978889 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 5, 10

Conread position: 5-294
Cow position: chr6:22969151-22968848 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 58

Conread position: 5-296
Cow position: chr6:52002428-52002141 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 66

Conread position: 5-296
Cow position: chr6:58316117-58315821 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 102, 51

Conread position: 5-297
Cow position: chr6:9026592-9026288 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 81, 55

Conread position: 5-297
Cow position: chr6:47327000-47327297 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 101, 40

Conread position: 5-298
Cow position: chr6:28148903-28148619 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 58

Conread position: 5-302
Cow position: chr6:16103128-16103436 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 106, 60

Conread position: 5-308
Cow position: chr6:67951023-67950720 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 67

Conread position: 5-322
Cow position: chr6:16626011-16625700 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 99, 69

Conread position: 5-325
Cow position: chr6:16675872-16675567 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 68

Conread position: 5-329
Cow position: chr6:50800347-50800669 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 59

Conread position: 5-338
Cow position: chr6:457247-456917 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 86, 62

Conread position: 5-338
Cow position: chr6:18988280-18987953 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 97

Conread position: 5-342
Cow position: chr6:11789457-11789134 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 171, 36

Conread position: 5-342
Cow position: chr6:24781487-24781831 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 50

Conread position: 6-194
Cow position: chr6:38234026-38233834 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 49

Conread position: 6-227
Cow position: chr6:3595858-3595634 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 56

Conread position: 6-228
Cow position: chr6:49694446-49694215 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 51

Conread position: 6-241
Cow position: chr6:65264475-65264708 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 100, 49

Conread position: 6-281
Cow position: chr6:47989239-47988976 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 49

Conread position: 6-293
Cow position: chr6:8318093-8318391 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 35, 50

Conread position: 6-294
Cow position: chr6:60239328-60239614 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 137, 57

Conread position: 6-296
Cow position: chr6:34076096-34075796 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 49

Conread position: 6-298
Cow position: chr6:51581185-51581487 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 65

Conread position: 6-328
Cow position: chr6:11192397-11192706 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 105, 57

Conread position: 6-339
Cow position: chr6:36928728-36928388 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 99, 57

Conread position: 7-222
Cow position: chr6:57299081-57298866 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 100, 56

Conread position: 7-232
Cow position: chr6:44984396-44984162 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 98, 48

Conread position: 7-256
Cow position: chr6:50577597-50577332 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 17

Conread position: 7-284
Cow position: chr6:7694265-7694569 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 48

Conread position: 7-284
Cow position: chr6:24110348-24110088 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 7-296
Cow position: chr6:49002666-49002952 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 7-336
Cow position: chr6:53401425-53401109 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 47

Conread position: 7-338
Cow position: chr6:5673313-5672965 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 302

Conread position: 7-338
Cow position: chr6:11169766-11169444 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 7-338
Cow position: chr6:38218734-38218400 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 48

Conread position: 7-338
Cow position: chr6:51674975-51674646 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 9

Conread position: 7-338
Cow position: chr6:59597714-59597393 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 56

Conread position: 8-242
Cow position: chr6:60819578-60819341 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 55

Conread position: 8-275
Cow position: chr6:19695874-19695600 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 47

Conread position: 8-284
Cow position: chr6:21736820-21737100 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 48

Conread position: 9-298
Cow position: chr6:49685648-49685355 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 10

Conread position: 10-239
Cow position: chr6:54288139-54287909 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 58

Conread position: 10-261
Cow position: chr6:21061818-21062076 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 105, 57

Conread position: 10-281
Cow position: chr6:62325054-62324777 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 133, 10

Conread position: 10-284
Cow position: chr6:60442477-60442203 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 45

Conread position: 10-296
Cow position: chr6:8804466-8804756 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 45

Conread position: 11-134
Cow position: chr6:18144253-18144135 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 95, 44

Conread position: 11-284
Cow position: chr6:10254303-10254026 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 45

Conread position: 12-233
Cow position: chr6:40834407-40834638 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 55

Conread position: 12-296
Cow position: chr6:130100-130392 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 51

Conread position: 12-337
Cow position: chr6:16411252-16410933 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 43

Conread position: 12-339
Cow position: chr6:58074111-58073778 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 92, 42

Conread position: 13-338
Cow position: chr6:59688238-59688566 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 41

Conread position: 14-205
Cow position: chr6:19351099-19351291 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 93, 16

Conread position: 14-275
Cow position: chr6:61137434-61137158 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 93, 49

Conread position: 15-264
Cow position: chr6:53731582-53731325 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 47

Conread position: 15-335
Cow position: chr6:12630079-12629757 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 91, 40

Conread position: 15-338
Cow position: chr6:8637336-8637011 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 92, 40

Conread position: 17-338
Cow position: chr6:4864491-4864802 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 38

Conread position: 19-296
Cow position: chr6:53711169-53710890 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 88, 48

Conread position: 19-338
Cow position: chr6:14838971-14839290 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 84, 36

Conread position: 20-244
Cow position: chr6:49604729-49604507 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 80, 22

Conread position: 20-291
Cow position: chr6:45160245-45160514 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 87, 35

Conread position: 20-295
Cow position: chr6:25773332-25773608 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 43

Conread position: 20-296
Cow position: chr6:2423798-2423521 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 87, 39

Conread position: 20-298
Cow position: chr6:67304858-67304572 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 92, 43

Conread position: 20-315
Cow position: chr6:58076283-58075978 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 35

Conread position: 20-338
Cow position: chr6:5957975-5958280 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 123, 35

Conread position: 20-338
Cow position: chr6:62479107-62479429 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 86, 46

Conread position: 20-339
Cow position: chr6:23986692-23987001 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 150, 110

Conread position: 22-268
Cow position: chr6:29266255-29266006 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 37

Conread position: 22-338
Cow position: chr6:21311707-21312019 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 150, 45

Conread position: 22-342
Cow position: chr6:20230775-20231093 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 33

Conread position: 23-309
Cow position: chr6:32335851-32335576 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 42

Conread position: 24-337
Cow position: chr6:60456878-60456568 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 38

Conread position: 24-338
Cow position: chr6:9732790-9733095 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 31

Conread position: 25-284
Cow position: chr6:48344381-48344112 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 82, 24

Conread position: 27-287
Cow position: chr6:18968734-18968990 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 84, 28

Conread position: 27-336
Cow position: chr6:39358299-39358601 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 36

Conread position: 27-338
Cow position: chr6:53345836-53345532 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 120, 36

Conread position: 28-321
Cow position: chr6:56850062-56849771 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 48

Conread position: 30-278
Cow position: chr6:24515155-24515403 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 25

Conread position: 30-284
Cow position: chr6:5462015-5462264 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 117, 33

Conread position: 32-298
Cow position: chr6:30825990-30826264 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 31

Conread position: 33-205
Cow position: chr6:603136-602956 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 73, 39

Conread position: 34-279
Cow position: chr6:58732264-58732525 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 33

Conread position: 35-296
Cow position: chr6:54884865-54885141 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 53-314
Cow position: chr6:58173210-58172939 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 199

Conread position: 58-284
Cow position: chr6:6460565-6460326 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 215

Conread position: 63-329
Cow position: chr6:64449408-64449137 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 24

Conread position: 63-338
Cow position: chr6:29210514-29210238 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 48, 118

Conread position: 65-313
Cow position: chr6:9736636-9736887 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 78, 7

Conread position: 65-336
Cow position: chr6:54294122-54293849 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 42, 12

Conread position: 66-278
Cow position: chr6:53138909-53139139 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 17

Conread position: 66-283
Cow position: chr6:61130463-61130697 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 6

Conread position: 67-267
Cow position: chr6:33277054-33276840 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 16

Conread position: 67-274
Cow position: chr6:6098271-6098488 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 14

Conread position: 72-278
Cow position: chr6:46400404-46400615 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 35, 12

Conread position: 74-289
Cow position: chr6:30786149-30786369 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 37, 111

Conread position: 75-231
Cow position: chr6:32986993-32987161 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 75-283
Cow position: chr6:15922994-15923212 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 32, 195

Conread position: 75-291
Cow position: chr6:7103226-7103458 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 32, 8

Conread position: 75-338
Cow position: chr6:2607619-2607350 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 32, 9

Conread position: 75-338
Cow position: chr6:10332086-10332370 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 9

Conread position: 75-338
Cow position: chr6:12500863-12500593 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 16

Conread position: 75-338
Cow position: chr6:32915918-32916184 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 8, 114

Conread position: 75-342
Cow position: chr6:24327136-24327403 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 37, 60

Conread position: 76-336
Cow position: chr6:46571121-46570859 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 35, 190

Conread position: 77-317
Cow position: chr6:61575612-61575357 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 29, 186

Conread position: 77-326
Cow position: chr6:32210625-32210884 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 136

Conread position: 77-338
Cow position: chr6:36196215-36195950 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 39, 218

Conread position: 78-277
Cow position: chr6:2896756-2896542 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 149

Conread position: 79-338
Cow position: chr6:12623465-12623207 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 16

Conread position: 85-275
Cow position: chr6:58439956-58439761 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 83, 61

Conread position: 97-259
Cow position: chr6:37783399-37783222 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 97-334
Cow position: chr6:33302390-33302150 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 197

Conread position: 100-256
Cow position: chr6:1499616-1499452 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 158

Conread position: 100-298
Cow position: chr6:13717819-13717622 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 9

Conread position: 102-342
Cow position: chr6:55607838-55608074 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 75

Conread position: 105-269
Cow position: chr6:46245346-46245524 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 105-271
Cow position: chr6:48425350-48425524 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 105-283
Cow position: chr6:10605659-10605470 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 105-284
Cow position: chr6:45690619-45690809 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 7

Conread position: 105-291
Cow position: chr6:34475580-34475766 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 128

Conread position: 105-296
Cow position: chr6:1783806-1784000 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 132

Conread position: 105-296
Cow position: chr6:42961390-42961595 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 43, 7

Conread position: 105-297
Cow position: chr6:389141-388942 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 42, 132

Conread position: 105-298
Cow position: chr6:20605907-20605704 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 166

Conread position: 105-318
Cow position: chr6:20379497-20379715 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 105-319
Cow position: chr6:59015587-59015816 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 29

Conread position: 105-337
Cow position: chr6:9375397-9375637 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 12

Conread position: 105-338
Cow position: chr6:19508469-19508695 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 54

Conread position: 105-338
Cow position: chr6:21535027-21534795 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 186

Conread position: 105-338
Cow position: chr6:50119815-50120049 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 193

Conread position: 105-342
Cow position: chr6:46667083-46666838 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 135

Conread position: 106-291
Cow position: chr6:60859329-60859529 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 107-284
Cow position: chr6:38895111-38895291 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 76

Conread position: 109-294
Cow position: chr6:19329788-19329985 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 111-264
Cow position: chr6:36011655-36011499 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 80

Conread position: 113-302
Cow position: chr6:59301857-59302056 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 162
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 180

Conread position: 116-342
Cow position: chr6:12845272-12845042 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 85

Conread position: 117-342
Cow position: chr6:12387369-12387588 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 26

Conread position: 136-338
Cow position: chr6:1174561-1174765 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 133

Conread position: 140-321
Cow position: chr6:61162643-61162460 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 174

Conread position: 140-336
Cow position: chr6:33509509-33509313 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 175-321
Cow position: chr6:56502202-56502060 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 139, 123

Show alignments to all cow chromosomes.