Non-Coding RNA Search

Cow genome map


           Conread name:
           rlin40_n18.y1
        

               Conread position:
               1-122
               

               Cow position:
               chr9:64064366-64064246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr9:40005471-40005612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               1-145
               

               Cow position:
               chr9:32669950-32669810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 58
               

               Conread position:
               1-145
               

               Cow position:
               chr9:52513451-52513315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr9:34283950-34284086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr9:35105793-35105652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-149
               

               Cow position:
               chr9:26310503-26310644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-168
               

               Cow position:
               chr9:3774158-3774327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-174
               

               Cow position:
               chr9:51720900-51720733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               1-178
               

               Cow position:
               chr9:8901230-8901050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               1-178
               

               Cow position:
               chr9:31638645-31638467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               1-178
               

               Cow position:
               chr9:50543429-50543250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               1-184
               

               Cow position:
               chr9:12225981-12225802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               146, 62
               

               Conread position:
               1-188
               

               Cow position:
               chr9:62668245-62668437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               105, 71
               

               Conread position:
               1-190
               

               Cow position:
               chr9:1370925-1371123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               61, 90
               

               Conread position:
               1-191
               

               Cow position:
               chr9:56065553-56065736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               175, 59
               

               Conread position:
               1-203
               

               Cow position:
               chr9:8919987-8920202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               1-203
               

               Cow position:
               chr9:25804829-25805038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               1-205
               

               Cow position:
               chr9:19493469-19493262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-206
               

               Cow position:
               chr9:9815410-9815615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               1-214
               

               Cow position:
               chr9:11123488-11123277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               1-215
               

               Cow position:
               chr9:43443798-43444011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               147, 54
               

               Conread position:
               1-217
               

               Cow position:
               chr9:24872830-24873042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               147, 62
               

               Conread position:
               1-219
               

               Cow position:
               chr9:17799623-17799850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               1-220
               

               Cow position:
               chr9:1938127-1938347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 55
               

               Conread position:
               1-220
               

               Cow position:
               chr9:30652713-30652489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               1-225
               

               Cow position:
               chr9:27279306-27279544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-226
               

               Cow position:
               chr9:53211494-53211270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               1-230
               

               Cow position:
               chr9:32710926-32711163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-230
               

               Cow position:
               chr9:50703114-50702881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               145, 50
               

               Conread position:
               1-231
               

               Cow position:
               chr9:11313513-11313275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-234
               

               Cow position:
               chr9:35028167-35027938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-237
               

               Cow position:
               chr9:11319637-11319394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               1-240
               

               Cow position:
               chr9:56011496-56011738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               147, 54
               

               Conread position:
               1-242
               

               Cow position:
               chr9:6839990-6840254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-243
               

               Cow position:
               chr9:1729677-1729432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               146, 62
               

               Conread position:
               1-243
               

               Cow position:
               chr9:49709842-49710088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               147, 71
               

               Conread position:
               1-244
               

               Cow position:
               chr9:35360107-35359857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               146, 54
               

               Conread position:
               1-245
               

               Cow position:
               chr9:50139282-50139527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               1-249
               

               Cow position:
               chr9:18217102-18216850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               147, 64
               

               Conread position:
               1-252
               

               Cow position:
               chr9:31814388-31814125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               1-252
               

               Cow position:
               chr9:33119891-33119629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               101, 49
               

               Conread position:
               1-255
               

               Cow position:
               chr9:25921820-25922079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               101, 54
               

               Conread position:
               1-260
               

               Cow position:
               chr9:44552743-44553008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               1-263
               

               Cow position:
               chr9:8562817-8563105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr9:2114010-2113738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               1-264
               

               Cow position:
               chr9:5836151-5836427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               105, 56
               

               Conread position:
               1-264
               

               Cow position:
               chr9:49983692-49983427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               1-264
               

               Cow position:
               chr9:55889808-55890075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               1-266
               

               Cow position:
               chr9:5053238-5052972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               1-267
               

               Cow position:
               chr9:9753394-9753128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-267
               

               Cow position:
               chr9:33597983-33598249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               145, 54
               

               Conread position:
               1-267
               

               Cow position:
               chr9:34286796-34287062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               1-271
               

               Cow position:
               chr9:47869006-47869278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 55
               

               Conread position:
               1-272
               

               Cow position:
               chr9:51620439-51620708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               106, 36
               

               Conread position:
               1-273
               

               Cow position:
               chr9:32625004-32625270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               106, 55
               

               Conread position:
               1-274
               

               Cow position:
               chr9:20961283-20961013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               150, 61
               

               Conread position:
               1-276
               

               Cow position:
               chr9:4128784-4128506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               106, 65
               

               Conread position:
               1-278
               

               Cow position:
               chr9:6225458-6225168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               1-278
               

               Cow position:
               chr9:24887203-24887476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               1-278
               

               Cow position:
               chr9:28354514-28354812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               1-278
               

               Cow position:
               chr9:47472682-47472975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               1-278
               

               Cow position:
               chr9:51566498-51566209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-283
               

               Cow position:
               chr9:22152088-22151804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               1-284
               

               Cow position:
               chr9:4630100-4630387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               1-284
               

               Cow position:
               chr9:9416399-9416122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 65
               

               Conread position:
               1-284
               

               Cow position:
               chr9:29191344-29191625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               1-288
               

               Cow position:
               chr9:31588106-31587808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               1-290
               

               Cow position:
               chr9:34468581-34468302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 53
               

               Conread position:
               1-290
               

               Cow position:
               chr9:41283012-41283318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-291
               

               Cow position:
               chr9:5327255-5327543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               1-291
               

               Cow position:
               chr9:29185140-29184842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 65
               

               Conread position:
               1-291
               

               Cow position:
               chr9:45285538-45285239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               74, 163
               

               Conread position:
               1-292
               

               Cow position:
               chr9:10144481-10144179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               1-292
               

               Cow position:
               chr9:60110247-60110527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               175, 12
               

               Conread position:
               1-293
               

               Cow position:
               chr9:5162053-5161775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               149, 54
               

               Conread position:
               1-294
               

               Cow position:
               chr9:20681409-20681109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               1-295
               

               Cow position:
               chr9:10010807-10011096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-296
               

               Cow position:
               chr9:22696219-22696513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               1-296
               

               Cow position:
               chr9:33681671-33681975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               1-296
               

               Cow position:
               chr9:55084305-55084000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               1-297
               

               Cow position:
               chr9:20901131-20900833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               1-297
               

               Cow position:
               chr9:32307234-32306942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               1-297
               

               Cow position:
               chr9:35849901-35850196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 54
               

               Conread position:
               1-298
               

               Cow position:
               chr9:20091043-20091337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               1-298
               

               Cow position:
               chr9:25546637-25546933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-298
               

               Cow position:
               chr9:26279172-26278878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               105, 55
               

               Conread position:
               1-298
               

               Cow position:
               chr9:29684141-29684442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               1-298
               

               Cow position:
               chr9:49764654-49764955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 56
               

               Conread position:
               1-301
               

               Cow position:
               chr9:17872113-17871806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 53
               

               Conread position:
               1-301
               

               Cow position:
               chr9:45756360-45756659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 72
               

               Conread position:
               1-302
               

               Cow position:
               chr9:35533956-35533649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 54
               

               Conread position:
               1-303
               

               Cow position:
               chr9:8723791-8724102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               100, 10
               

               Conread position:
               1-303
               

               Cow position:
               chr9:17310568-17310258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 54
               

               Conread position:
               1-308
               

               Cow position:
               chr9:41513621-41513928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-309
               

               Cow position:
               chr9:5245850-5246158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 78
               

               Conread position:
               1-314
               

               Cow position:
               chr9:22114638-22114319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               1-314
               

               Cow position:
               chr9:31626146-31626463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               157, 22
               

               Conread position:
               1-317
               

               Cow position:
               chr9:41416330-41416666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               41, 282
               

               Conread position:
               1-318
               

               Cow position:
               chr9:7634268-7634585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               1-319
               

               Cow position:
               chr9:9723882-9723565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               1-321
               

               Cow position:
               chr9:31079085-31078763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               101, 51
               

               Conread position:
               1-325
               

               Cow position:
               chr9:647774-648102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               1-326
               

               Cow position:
               chr9:43870972-43871297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 62
               

               Conread position:
               1-328
               

               Cow position:
               chr9:50606951-50606627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               142, 54
               

               Conread position:
               1-329
               

               Cow position:
               chr9:30477778-30477473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               122, 48
               

               Conread position:
               1-329
               

               Cow position:
               chr9:34958059-34957728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               1-329
               

               Cow position:
               chr9:36445617-36445945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               1-332
               

               Cow position:
               chr9:29006554-29006887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               1-332
               

               Cow position:
               chr9:52407161-52407497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-332
               

               Cow position:
               chr9:64155854-64155529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 54
               

               Conread position:
               1-334
               

               Cow position:
               chr9:30402428-30402091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 55
               

               Conread position:
               1-336
               

               Cow position:
               chr9:6934077-6933741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 58
               

               Conread position:
               1-336
               

               Cow position:
               chr9:9443604-9443261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               1-336
               

               Cow position:
               chr9:26057440-26057121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               1-336
               

               Cow position:
               chr9:28983179-28983513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               1-336
               

               Cow position:
               chr9:35167173-35167502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 54
               

               Conread position:
               1-336
               

               Cow position:
               chr9:35904748-35904420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-336
               

               Cow position:
               chr9:44467342-44467018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               1-337
               

               Cow position:
               chr9:21460157-21459823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 64
               

               Conread position:
               1-337
               

               Cow position:
               chr9:47906284-47905948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 68
               

               Conread position:
               1-338
               

               Cow position:
               chr9:823957-824288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               105, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr9:1520740-1520396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               1-338
               

               Cow position:
               chr9:4646328-4646001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr9:5219175-5218847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               1-338
               

               Cow position:
               chr9:5227175-5226832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 15
               

               Conread position:
               1-338
               

               Cow position:
               chr9:5433629-5433964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               1-338
               

               Cow position:
               chr9:5594500-5594833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr9:6089085-6089436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr9:8534693-8534353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr9:8937149-8937481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               1-338
               

               Cow position:
               chr9:15805926-15805588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr9:18215913-18215580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               70, 134
               

               Conread position:
               1-338
               

               Cow position:
               chr9:20815865-20816174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 18
               

               Conread position:
               1-338
               

               Cow position:
               chr9:22443630-22443282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr9:25964836-25964491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               107, 48
               

               Conread position:
               1-338
               

               Cow position:
               chr9:26403782-26404122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr9:28726727-28726393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr9:31346947-31347286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               1-338
               

               Cow position:
               chr9:33092949-33093277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-338
               

               Cow position:
               chr9:33218957-33218619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 36
               

               Conread position:
               1-338
               

               Cow position:
               chr9:35375422-35375754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               1-338
               

               Cow position:
               chr9:42445986-42445640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 71
               

               Conread position:
               1-338
               

               Cow position:
               chr9:42497818-42498162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               1-338
               

               Cow position:
               chr9:46316786-46316455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 54
               

               Conread position:
               1-338
               

               Cow position:
               chr9:50081043-50080713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr9:54924615-54924964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               105, 71
               

               Conread position:
               1-338
               

               Cow position:
               chr9:59386772-59386447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 62
               

               Conread position:
               1-338
               

               Cow position:
               chr9:64050564-64050227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               1-339
               

               Cow position:
               chr9:5319617-5319963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               1-339
               

               Cow position:
               chr9:32676674-32677016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 62
               

               Conread position:
               1-339
               

               Cow position:
               chr9:63784917-63784592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 62
               

               Conread position:
               1-342
               

               Cow position:
               chr9:3220133-3220456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               1-342
               

               Cow position:
               chr9:3387686-3388028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               1-342
               

               Cow position:
               chr9:3931957-3932302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               1-342
               

               Cow position:
               chr9:7363021-7363372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-342
               

               Cow position:
               chr9:7409760-7410119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 309
               

               Conread position:
               1-342
               

               Cow position:
               chr9:9552087-9552422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               1-342
               

               Cow position:
               chr9:16300572-16300231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               1-342
               

               Cow position:
               chr9:19903079-19903389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-342
               

               Cow position:
               chr9:21888167-21888506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 17
               

               Conread position:
               1-342
               

               Cow position:
               chr9:24997522-24997167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               1-342
               

               Cow position:
               chr9:48107119-48106780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               1-342
               

               Cow position:
               chr9:62656801-62657129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               134, 53
               

               Conread position:
               2-168
               

               Cow position:
               chr9:17518491-17518326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               2-178
               

               Cow position:
               chr9:40215241-40215417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 61
               

               Conread position:
               2-222
               

               Cow position:
               chr9:61302998-61303224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               2-230
               

               Cow position:
               chr9:33038463-33038227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               104, 17
               

               Conread position:
               2-247
               

               Cow position:
               chr9:5209578-5209832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               104, 52
               

               Conread position:
               2-278
               

               Cow position:
               chr9:1751336-1751614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 53
               

               Conread position:
               2-281
               

               Cow position:
               chr9:9823508-9823237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               2-282
               

               Cow position:
               chr9:8288613-8288900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 53
               

               Conread position:
               2-283
               

               Cow position:
               chr9:17740944-17740659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               144, 40
               

               Conread position:
               2-284
               

               Cow position:
               chr9:4861382-4861674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               104, 52
               

               Conread position:
               2-292
               

               Cow position:
               chr9:55287894-55287600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 54
               

               Conread position:
               2-294
               

               Cow position:
               chr9:1997134-1997429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               2-295
               

               Cow position:
               chr9:17928755-17929068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               2-298
               

               Cow position:
               chr9:8950902-8951201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               104, 58
               

               Conread position:
               2-298
               

               Cow position:
               chr9:33940603-33940908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               2-299
               

               Cow position:
               chr9:13221894-13221595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 55
               

               Conread position:
               2-309
               

               Cow position:
               chr9:6397785-6397475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 50
               

               Conread position:
               2-334
               

               Cow position:
               chr9:15215689-15215346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 65
               

               Conread position:
               2-338
               

               Cow position:
               chr9:5509722-5510057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               2-338
               

               Cow position:
               chr9:22318347-22318671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 58
               

               Conread position:
               2-338
               

               Cow position:
               chr9:41679745-41680066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               2-338
               

               Cow position:
               chr9:41789282-41789620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               2-338
               

               Cow position:
               chr9:44921395-44921079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               105, 63
               

               Conread position:
               2-342
               

               Cow position:
               chr9:61997600-61997259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 52
               

               Conread position:
               3-174
               

               Cow position:
               chr9:26477215-26477385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               103, 52
               

               Conread position:
               3-178
               

               Cow position:
               chr9:11168729-11168904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               104, 52
               

               Conread position:
               3-207
               

               Cow position:
               chr9:49416986-49417195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               103, 52
               

               Conread position:
               3-243
               

               Cow position:
               chr9:1972942-1973185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               3-243
               

               Cow position:
               chr9:64105898-64106150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               3-244
               

               Cow position:
               chr9:43757540-43757768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-244
               

               Cow position:
               chr9:52131009-52131263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 220
               

               Conread position:
               3-263
               

               Cow position:
               chr9:29108535-29108801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               3-271
               

               Cow position:
               chr9:23042773-23043047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               3-278
               

               Cow position:
               chr9:5531941-5532231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               3-291
               

               Cow position:
               chr9:20322100-20321821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               143, 12
               

               Conread position:
               3-294
               

               Cow position:
               chr9:14974920-14974629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               3-303
               

               Cow position:
               chr9:8338026-8338334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               3-334
               

               Cow position:
               chr9:55321636-55321981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               151, 51
               

               Conread position:
               3-336
               

               Cow position:
               chr9:31640326-31639987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               104, 52
               

               Conread position:
               3-338
               

               Cow position:
               chr9:1952271-1951937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               3-338
               

               Cow position:
               chr9:8998348-8998688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 294
               

               Conread position:
               3-338
               

               Cow position:
               chr9:19714079-19714403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 60
               

               Conread position:
               3-338
               

               Cow position:
               chr9:38343886-38344228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               3-342
               

               Cow position:
               chr9:56032316-56031992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               145, 60
               

               Conread position:
               3-342
               

               Cow position:
               chr9:62442288-62442618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               4-168
               

               Cow position:
               chr9:47446028-47445864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               4-282
               

               Cow position:
               chr9:26086056-26086350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               4-295
               

               Cow position:
               chr9:44915097-44914800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 37
               

               Conread position:
               4-302
               

               Cow position:
               chr9:52787542-52787233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               5-152
               

               Cow position:
               chr9:11304078-11303938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 50
               

               Conread position:
               5-174
               

               Cow position:
               chr9:6852070-6851899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               5-183
               

               Cow position:
               chr9:63896537-63896714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               139, 66
               

               Conread position:
               5-208
               

               Cow position:
               chr9:32847886-32848100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               5-226
               

               Cow position:
               chr9:1532327-1532105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               5-244
               

               Cow position:
               chr9:389018-388770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               5-261
               

               Cow position:
               chr9:38846336-38846087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               5-262
               

               Cow position:
               chr9:34902104-34901852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               106, 16
               

               Conread position:
               5-265
               

               Cow position:
               chr9:38193010-38193266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               169, 69
               

               Conread position:
               5-266
               

               Cow position:
               chr9:11068474-11068202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               5-266
               

               Cow position:
               chr9:15006753-15006489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               5-270
               

               Cow position:
               chr9:54716606-54716351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 62
               

               Conread position:
               5-284
               

               Cow position:
               chr9:13670636-13670922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 16
               

               Conread position:
               5-291
               

               Cow position:
               chr9:44709826-44710113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               5-297
               

               Cow position:
               chr9:58134019-58133726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               5-302
               

               Cow position:
               chr9:15951156-15950852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               101, 67
               

               Conread position:
               5-306
               

               Cow position:
               chr9:32371756-32371451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               5-309
               

               Cow position:
               chr9:63745812-63746114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 14
               

               Conread position:
               5-335
               

               Cow position:
               chr9:55651037-55651354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               5-336
               

               Cow position:
               chr9:54528513-54528846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               5-338
               

               Cow position:
               chr9:39681340-39681691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               5-338
               

               Cow position:
               chr9:55075131-55074802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               5-339
               

               Cow position:
               chr9:5500854-5501183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 62
               

               Conread position:
               5-339
               

               Cow position:
               chr9:10309000-10308673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               5-339
               

               Cow position:
               chr9:28947859-28948187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               143, 62
               

               Conread position:
               5-342
               

               Cow position:
               chr9:16086257-16086595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 50
               

               Conread position:
               5-342
               

               Cow position:
               chr9:20039134-20038824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               5-342
               

               Cow position:
               chr9:20416509-20416174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               5-342
               

               Cow position:
               chr9:29808454-29808798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               6-158
               

               Cow position:
               chr9:33697030-33697179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               100, 62
               

               Conread position:
               6-169
               

               Cow position:
               chr9:31270782-31270943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               101, 49
               

               Conread position:
               6-174
               

               Cow position:
               chr9:31557729-31557560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 55
               

               Conread position:
               6-266
               

               Cow position:
               chr9:34919258-34918999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               6-279
               

               Cow position:
               chr9:30749587-30749305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               6-284
               

               Cow position:
               chr9:58972497-58972195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               103, 68
               

               Conread position:
               6-296
               

               Cow position:
               chr9:50076063-50076362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               100, 49
               

               Conread position:
               6-338
               

               Cow position:
               chr9:54611234-54610899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 35
               

               Conread position:
               6-342
               

               Cow position:
               chr9:54998027-54997688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               7-241
               

               Cow position:
               chr9:62134625-62134378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               7-257
               

               Cow position:
               chr9:58979400-58979659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               7-282
               

               Cow position:
               chr9:59795286-59794997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               103, 48
               

               Conread position:
               7-293
               

               Cow position:
               chr9:29825032-29825323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               49, 40
               

               Conread position:
               7-330
               

               Cow position:
               chr9:1949922-1950247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               7-338
               

               Cow position:
               chr9:5268555-5268889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               7-338
               

               Cow position:
               chr9:5763630-5763297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               7-338
               

               Cow position:
               chr9:37016894-37017217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 56
               

               Conread position:
               7-338
               

               Cow position:
               chr9:38961432-38961104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               7-342
               

               Cow position:
               chr9:39152680-39152350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               100, 64
               

               Conread position:
               8-284
               

               Cow position:
               chr9:6879774-6880055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 48
               

               Conread position:
               8-298
               

               Cow position:
               chr9:20579599-20579327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               86, 34
               

               Conread position:
               8-342
               

               Cow position:
               chr9:10092390-10092058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 55
               

               Conread position:
               9-161
               

               Cow position:
               chr9:33114350-33114501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               9-243
               

               Cow position:
               chr9:29091797-29092048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 56
               

               Conread position:
               9-259
               

               Cow position:
               chr9:39577737-39577994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               139, 54
               

               Conread position:
               9-339
               

               Cow position:
               chr9:9461652-9461323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               10-170
               

               Cow position:
               chr9:18029399-18029229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               10-278
               

               Cow position:
               chr9:29330646-29330380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               10-301
               

               Cow position:
               chr9:20989444-20989151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 45
               

               Conread position:
               10-327
               

               Cow position:
               chr9:50977240-50976924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               11-329
               

               Cow position:
               chr9:29035029-29034704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               11-339
               

               Cow position:
               chr9:26390776-26391098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               12-298
               

               Cow position:
               chr9:30138143-30138424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 11
               

               Conread position:
               12-336
               

               Cow position:
               chr9:52484913-52484590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               136, 54
               

               Conread position:
               13-278
               

               Cow position:
               chr9:1712467-1712209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 43
               

               Conread position:
               14-335
               

               Cow position:
               chr9:21840082-21840404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               15-317
               

               Cow position:
               chr9:20738707-20739019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               15-338
               

               Cow position:
               chr9:9199769-9199452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 40
               

               Conread position:
               16-291
               

               Cow position:
               chr9:64517086-64516805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 6
               

               Conread position:
               17-238
               

               Cow position:
               chr9:35128500-35128733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               17-298
               

               Cow position:
               chr9:37000048-36999762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               17-307
               

               Cow position:
               chr9:35202890-35203191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               17-338
               

               Cow position:
               chr9:19541918-19542241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               67, 37
               

               Conread position:
               18-225
               

               Cow position:
               chr9:58734382-58734601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               19-271
               

               Cow position:
               chr9:55118097-55118350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               128, 53
               

               Conread position:
               20-183
               

               Cow position:
               chr9:4324141-4323981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               20-206
               

               Cow position:
               chr9:3847684-3847875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               75, 35
               

               Conread position:
               20-219
               

               Cow position:
               chr9:1879396-1879596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 46
               

               Conread position:
               20-223
               

               Cow position:
               chr9:6118133-6117923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               128, 46
               

               Conread position:
               20-242
               

               Cow position:
               chr9:40603961-40604193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               20-247
               

               Cow position:
               chr9:61544667-61544897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 35
               

               Conread position:
               20-296
               

               Cow position:
               chr9:11299674-11299400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               20-301
               

               Cow position:
               chr9:27077226-27076949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               20-321
               

               Cow position:
               chr9:34000604-34000288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               20-338
               

               Cow position:
               chr9:9557987-9558313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               106, 34
               

               Conread position:
               20-338
               

               Cow position:
               chr9:17785440-17785126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               127, 43
               

               Conread position:
               20-338
               

               Cow position:
               chr9:25657525-25657858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               20-338
               

               Cow position:
               chr9:57951305-57950997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               21-199
               

               Cow position:
               chr9:14358180-14358358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               86, 42
               

               Conread position:
               21-228
               

               Cow position:
               chr9:50667438-50667653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               22-278
               

               Cow position:
               chr9:53602445-53602692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 43
               

               Conread position:
               22-321
               

               Cow position:
               chr9:18002936-18002628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 41
               

               Conread position:
               26-337
               

               Cow position:
               chr9:49279486-49279783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               26-342
               

               Cow position:
               chr9:27697702-27697394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 47
               

               Conread position:
               27-205
               

               Cow position:
               chr9:11198320-11198137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               27-302
               

               Cow position:
               chr9:35306095-35305818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               32-290
               

               Cow position:
               chr9:58439754-58439491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               33-336
               

               Cow position:
               chr9:4928655-4928956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               34-282
               

               Cow position:
               chr9:60037680-60037938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               38-289
               

               Cow position:
               chr9:36066939-36067195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               44-338
               

               Cow position:
               chr9:42998431-42998129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               47-338
               

               Cow position:
               chr9:16218606-16218313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               92, 8
               

               Conread position:
               47-338
               

               Cow position:
               chr9:36623407-36623120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 12
               

               Conread position:
               54-269
               

               Cow position:
               chr9:16182445-16182221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               63-264
               

               Cow position:
               chr9:26556152-26555941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 96
               

               Conread position:
               63-338
               

               Cow position:
               chr9:8997603-8997889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               65-338
               

               Cow position:
               chr9:32812398-32812679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 211
               

               Conread position:
               65-339
               

               Cow position:
               chr9:3924679-3924952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               67-267
               

               Cow position:
               chr9:41995765-41995982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               68-284
               

               Cow position:
               chr9:3070364-3070138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               68-338
               

               Cow position:
               chr9:20394063-20393795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               72-272
               

               Cow position:
               chr9:61847090-61846877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 131
               

               Conread position:
               74-296
               

               Cow position:
               chr9:9490855-9491086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               33, 138
               

               Conread position:
               74-303
               

               Cow position:
               chr9:40542183-40542417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               75-276
               

               Cow position:
               chr9:54677311-54677499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               75-289
               

               Cow position:
               chr9:17634770-17634541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 135
               

               Conread position:
               75-298
               

               Cow position:
               chr9:58673803-58674040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               75-338
               

               Cow position:
               chr9:24726612-24726345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               75-342
               

               Cow position:
               chr9:37069507-37069214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               76-289
               

               Cow position:
               chr9:58204729-58204951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 195
               

               Conread position:
               76-334
               

               Cow position:
               chr9:22228018-22227756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               31, 212
               

               Conread position:
               77-264
               

               Cow position:
               chr9:23541342-23541153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               77-303
               

               Cow position:
               chr9:18073047-18072811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               35, 180
               

               Conread position:
               77-328
               

               Cow position:
               chr9:5393114-5393373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               30, 197
               

               Conread position:
               78-296
               

               Cow position:
               chr9:15983016-15982781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               78-338
               

               Cow position:
               chr9:26577788-26577529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 212
               

               Conread position:
               79-259
               

               Cow position:
               chr9:38875509-38875314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               80-284
               

               Cow position:
               chr9:1984457-1984237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               82-295
               

               Cow position:
               chr9:45141531-45141322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               91-338
               

               Cow position:
               chr9:20406715-20406969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 184
               

               Conread position:
               97-266
               

               Cow position:
               chr9:37141320-37141494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               101-298
               

               Cow position:
               chr9:26310648-26310859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               103-342
               

               Cow position:
               chr9:18140203-18139958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               105-250
               

               Cow position:
               chr9:28735577-28735729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               105-281
               

               Cow position:
               chr9:10877774-10877584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               105-289
               

               Cow position:
               chr9:48343699-48343891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               45, 164
               

               Conread position:
               105-293
               

               Cow position:
               chr9:35100965-35101161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               105-294
               

               Cow position:
               chr9:20318982-20318781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               105-296
               

               Cow position:
               chr9:31662561-31662766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               105-317
               

               Cow position:
               chr9:7866160-7866381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 152
               

               Conread position:
               105-336
               

               Cow position:
               chr9:22616722-22616950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               46, 165
               

               Conread position:
               105-336
               

               Cow position:
               chr9:52505213-52504973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 196
               

               Conread position:
               105-338
               

               Cow position:
               chr9:3379220-3379444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 46
               

               Conread position:
               105-338
               

               Cow position:
               chr9:22440412-22440171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 86
               

               Conread position:
               105-338
               

               Cow position:
               chr9:38184387-38184145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               41, 196
               

               Conread position:
               109-313
               

               Cow position:
               chr9:1350345-1350138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               113-335
               

               Cow position:
               chr9:42585520-42585296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               35, 117
               

               Conread position:
               128-304
               

               Cow position:
               chr9:29819796-29819967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               145-293
               

               Cow position:
               chr9:48017683-48017529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               146-325
               

               Cow position:
               chr9:55262438-55262259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 116
               
Show alignments to all cow chromosomes.
Conread position:	1-122
Cow position:	chr9:64064366-64064246 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	96
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	54, 0
Conread position:	1-144
Cow position:	chr9:40005471-40005612 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	113
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	109, 54
Conread position:	1-145
Cow position:	chr9:32669950-32669810 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	115
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	106, 58
Conread position:	1-146
Cow position:	chr9:34283950-34284086 (view UCSC Genome Browser custom track)
Alignm length:	146
Alignm identity:	114
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	62, 0
Conread position:	1-149
Cow position:	chr9:26310503-26310644 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	117
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	62, 0
Conread position:	1-168
Cow position:	chr9:3774158-3774327 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	134
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	105, 54
Conread position:	1-174
Cow position:	chr9:51720900-51720733 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	145
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	110, 18
Conread position:	1-178
Cow position:	chr9:8901230-8901050 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	136
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	106, 62
Conread position:	1-184
Cow position:	chr9:12225981-12225802 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	141
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	146, 62
Conread position:	1-188
Cow position:	chr9:62668245-62668437 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	148
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	105, 71
Conread position:	1-190
Cow position:	chr9:1370925-1371123 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	143
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	61, 90
Conread position:	1-191
Cow position:	chr9:56065553-56065736 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	143
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	175, 59
Conread position:	1-203
Cow position:	chr9:8919987-8920202 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	164
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	72, 54
Conread position:	1-205
Cow position:	chr9:19493469-19493262 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	159
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	105, 54
Conread position:	1-206
Cow position:	chr9:9815410-9815615 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	155
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	72, 15
Conread position:	1-214
Cow position:	chr9:11123488-11123277 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	159
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	106, 62
Conread position:	1-215
Cow position:	chr9:43443798-43444011 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	171
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	147, 54
Conread position:	1-217
Cow position:	chr9:24872830-24873042 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	167
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	147, 62
Conread position:	1-219
Cow position:	chr9:17799623-17799850 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	179
Alignm E-value:	1e-37
Alignm gaps (pig, cow):	105, 61
Conread position:	1-220
Cow position:	chr9:1938127-1938347 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	160
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	108, 55