Cow genome map

Conread name: rlnt35c_a20.y1

Conread position: 101-254
Cow position: chr10:29090505-29090348 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 127

Conread position: 103-257
Cow position: chr10:25149937-25150094 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 44

Conread position: 103-261
Cow position: chr10:22519854-22519700 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 23

Conread position: 110-221
Cow position: chr10:6212553-6212441 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 93

Conread position: 110-229
Cow position: chr10:31400841-31400720 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 110-230
Cow position: chr10:25822198-25822074 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 110-238
Cow position: chr10:1978614-1978484 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 34

Conread position: 110-242
Cow position: chr10:35731470-35731337 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 41

Conread position: 110-248
Cow position: chr10:26103092-26102954 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 114

Conread position: 110-250
Cow position: chr10:24971269-24971132 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 33

Conread position: 110-252
Cow position: chr10:37508092-37507949 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 34

Conread position: 110-253
Cow position: chr10:19191811-19191952 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 34

Conread position: 110-254
Cow position: chr10:34661268-34661130 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 34

Conread position: 110-261
Cow position: chr10:67443062-67442906 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 21

Conread position: 110-262
Cow position: chr10:16641872-16641718 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 85, 34

Conread position: 112-224
Cow position: chr10:5784196-5784078 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 113-230
Cow position: chr10:49029712-49029828 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 31

Conread position: 113-263
Cow position: chr10:16414515-16414362 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 114-241
Cow position: chr10:57095140-57095014 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 114-248
Cow position: chr10:9959275-9959416 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 31

Conread position: 114-254
Cow position: chr10:4198064-4198208 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 114-257
Cow position: chr10:41132324-41132469 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 49

Conread position: 114-261
Cow position: chr10:59455422-59455571 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 121

Conread position: 117-230
Cow position: chr10:65904308-65904420 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 27

Conread position: 117-249
Cow position: chr10:24756476-24756608 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 105, 27

Conread position: 118-252
Cow position: chr10:52881552-52881414 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 119-220
Cow position: chr10:20447985-20448087 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 119-222
Cow position: chr10:2857113-2857219 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 25

Conread position: 119-225
Cow position: chr10:37426067-37425963 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 25

Conread position: 119-226
Cow position: chr10:14668464-14668574 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 119-226
Cow position: chr10:60697560-60697453 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 8

Conread position: 119-229
Cow position: chr10:40998924-40999036 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 25

Conread position: 119-230
Cow position: chr10:5265351-5265467 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 11, 43

Conread position: 119-230
Cow position: chr10:23340958-23341072 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 20, 104

Conread position: 119-231
Cow position: chr10:18849589-18849704 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 119-231
Cow position: chr10:61509877-61509767 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 12

Conread position: 119-233
Cow position: chr10:9575982-9575866 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 25

Conread position: 119-239
Cow position: chr10:30369756-30369638 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 119-241
Cow position: chr10:47429892-47430015 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 12

Conread position: 119-243
Cow position: chr10:18751409-18751285 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 25

Conread position: 119-245
Cow position: chr10:15817728-15817606 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 119-246
Cow position: chr10:34903542-34903669 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 26

Conread position: 119-246
Cow position: chr10:61922077-61921948 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 117

Conread position: 119-247
Cow position: chr10:21348922-21348798 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 119-252
Cow position: chr10:46327757-46327893 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 16

Conread position: 119-254
Cow position: chr10:10104847-10104983 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 26

Conread position: 119-254
Cow position: chr10:45371122-45371260 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 25

Conread position: 119-255
Cow position: chr10:43459987-43459848 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 25

Conread position: 119-255
Cow position: chr10:58651123-58650989 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 119-258
Cow position: chr10:17022500-17022363 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 119-260
Cow position: chr10:61039186-61039328 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 17

Conread position: 119-261
Cow position: chr10:31027576-31027432 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 117

Conread position: 119-262
Cow position: chr10:8891223-8891076 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 119-262
Cow position: chr10:33694441-33694581 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 26

Conread position: 119-263
Cow position: chr10:39124199-39124348 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 120-214
Cow position: chr10:21422094-21422001 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 120-229
Cow position: chr10:27118895-27118784 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 24

Conread position: 120-242
Cow position: chr10:14947322-14947445 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 108
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 77, 14

Conread position: 120-248
Cow position: chr10:15602114-15601980 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 120-248
Cow position: chr10:35820270-35820139 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 24

Conread position: 120-253
Cow position: chr10:47159282-47159409 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 24

Conread position: 120-263
Cow position: chr10:48814360-48814214 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 120-263
Cow position: chr10:49846842-49846989 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 120-263
Cow position: chr10:55069275-55069417 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 74, 14

Conread position: 121-230
Cow position: chr10:22390665-22390777 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 23

Conread position: 121-249
Cow position: chr10:11966779-11966645 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 122-226
Cow position: chr10:39622295-39622188 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 122-243
Cow position: chr10:37645472-37645586 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 123-249
Cow position: chr10:36531658-36531528 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 116

Conread position: 124-231
Cow position: chr10:28571470-28571583 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 20

Conread position: 124-249
Cow position: chr10:14188539-14188419 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 124-250
Cow position: chr10:6719045-6719176 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 20

Conread position: 125-230
Cow position: chr10:10829113-10829221 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 125-252
Cow position: chr10:10027642-10027775 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 115

Conread position: 127-244
Cow position: chr10:34646377-34646264 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 127-251
Cow position: chr10:23346234-23346108 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 105

Conread position: 127-259
Cow position: chr10:42371798-42371666 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 130-231
Cow position: chr10:54504679-54504783 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 97

Conread position: 130-241
Cow position: chr10:46799216-46799327 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 14

Conread position: 131-229
Cow position: chr10:52825096-52824994 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 137-256
Cow position: chr10:22961094-22960974 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 22

Conread position: 145-253
Cow position: chr10:48316226-48316119 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.