Cow genome map


           Conread name:
           rlnt35c_a20.y1
        

               Conread position:
               101-254
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 127
               

               Conread position:
               103-257
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 44
               

               Conread position:
               103-261
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               103, 23
               

               Conread position:
               110-221
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               110-229
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               110-230
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               110-238
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               110-242
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 41
               

               Conread position:
               110-248
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               110-250
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               110-252
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               110-253
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               110-254
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               110-261
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               110-262
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 34
               

               Conread position:
               112-224
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               113-230
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 31
               

               Conread position:
               113-263
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               114-241
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               114-248
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               114-254
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               114-257
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 49
               

               Conread position:
               114-261
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 121
               

               Conread position:
               117-230
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               117-249
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               118-252
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               119-220
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               119-222
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               119-226
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               119-226
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 8
               

               Conread position:
               119-229
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 104
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               119-233
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-239
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-241
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               119-243
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               119-245
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-246
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               119-246
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 117
               

               Conread position:
               119-247
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               119-252
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               119-255
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               119-255
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-258
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               119-260
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               119-261
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               119-263
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               120-214
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               120-229
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               120-242
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               120-248
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               120-248
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               120-253
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               120-263
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               120-263
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               120-263
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               74, 14
               

               Conread position:
               121-230
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               121-249
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               122-226
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               123-249
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 116
               

               Conread position:
               124-231
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               124-249
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               124-250
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               125-230
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               125-252
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               34, 115
               

               Conread position:
               127-244
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               127-251
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               127-259
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               130-231
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               130-241
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               131-229
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               137-256
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               145-253
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 0
               
Show alignments to all cow chromosomes.