Cow genome map

Conread name: rlnt35c_a20.y1

Conread position: 108-250
Cow position: chr11:63866595-63866454 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 10

Conread position: 109-230
Cow position: chr11:49872822-49872699 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 11

Conread position: 110-231
Cow position: chr11:48247010-48246889 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 90, 34

Conread position: 110-232
Cow position: chr11:42452841-42452716 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 110-249
Cow position: chr11:8437630-8437484 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 126

Conread position: 110-250
Cow position: chr11:4488743-4488603 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 79

Conread position: 110-250
Cow position: chr11:36104377-36104512 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 92

Conread position: 110-251
Cow position: chr11:4653191-4653051 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 34

Conread position: 110-251
Cow position: chr11:55052935-55053071 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 110-257
Cow position: chr11:64334900-64335046 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 113, 49

Conread position: 111-262
Cow position: chr11:53314328-53314175 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 106

Conread position: 112-244
Cow position: chr11:29782227-29782359 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 19

Conread position: 113-253
Cow position: chr11:55911580-55911439 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 119

Conread position: 114-257
Cow position: chr11:6784274-6784417 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 8, 31

Conread position: 117-226
Cow position: chr11:69978041-69978149 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 117-230
Cow position: chr11:18154482-18154369 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 28

Conread position: 117-231
Cow position: chr11:30192249-30192366 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 110

Conread position: 117-254
Cow position: chr11:2907458-2907321 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 112, 27

Conread position: 117-261
Cow position: chr11:36182765-36182909 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 82, 30

Conread position: 117-262
Cow position: chr11:65431589-65431734 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 113

Conread position: 119-220
Cow position: chr11:6154643-6154746 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 25

Conread position: 119-225
Cow position: chr11:21885905-21886013 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 25

Conread position: 119-225
Cow position: chr11:62789203-62789310 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 85, 40

Conread position: 119-225
Cow position: chr11:67615174-67615069 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 16

Conread position: 119-226
Cow position: chr11:83323652-83323761 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 25

Conread position: 119-228
Cow position: chr11:27248563-27248674 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 25

Conread position: 119-229
Cow position: chr11:20238749-20238863 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 119-229
Cow position: chr11:50152741-50152626 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 119-230
Cow position: chr11:30494066-30494176 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 119-232
Cow position: chr11:35580333-35580451 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 119-234
Cow position: chr11:44222958-44223073 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 119-238
Cow position: chr11:63999019-63998896 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 110

Conread position: 119-240
Cow position: chr11:63165574-63165454 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 25

Conread position: 119-241
Cow position: chr11:12768471-12768596 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 18

Conread position: 119-242
Cow position: chr11:30986711-30986835 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 25

Conread position: 119-243
Cow position: chr11:81135095-81134968 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 16

Conread position: 119-244
Cow position: chr11:3175746-3175871 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 12

Conread position: 119-245
Cow position: chr11:42206494-42206618 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 119-245
Cow position: chr11:44032084-44032208 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 25

Conread position: 119-247
Cow position: chr11:19591922-19591793 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 25

Conread position: 119-247
Cow position: chr11:32587051-32586924 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 25

Conread position: 119-247
Cow position: chr11:81175670-81175803 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 119-254
Cow position: chr11:44615091-44614955 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 25

Conread position: 119-254
Cow position: chr11:80296780-80296648 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 6, 26

Conread position: 119-256
Cow position: chr11:17676300-17676160 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 25

Conread position: 119-257
Cow position: chr11:80823982-80824116 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 6, 16

Conread position: 119-259
Cow position: chr11:43737036-43736893 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 63

Conread position: 119-260
Cow position: chr11:1932417-1932269 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 119-260
Cow position: chr11:80923251-80923109 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 120

Conread position: 119-262
Cow position: chr11:4225163-4225304 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 25

Conread position: 120-226
Cow position: chr11:36300508-36300400 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 120-229
Cow position: chr11:12742417-12742307 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 120-244
Cow position: chr11:62620450-62620580 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 37, 24

Conread position: 120-248
Cow position: chr11:42066938-42067069 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 107

Conread position: 120-251
Cow position: chr11:72870977-72871107 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 43

Conread position: 120-262
Cow position: chr11:28078567-28078709 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 24

Conread position: 120-262
Cow position: chr11:36180520-36180663 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 78, 39

Conread position: 120-263
Cow position: chr11:3924340-3924202 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 108, 24

Conread position: 120-263
Cow position: chr11:52690447-52690304 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 14

Conread position: 121-225
Cow position: chr11:62812875-62812769 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 23

Conread position: 122-230
Cow position: chr11:46922809-46922699 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 22

Conread position: 122-230
Cow position: chr11:63977133-63977243 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 22

Conread position: 124-250
Cow position: chr11:16314950-16315083 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 124-258
Cow position: chr11:21590463-21590603 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 116

Conread position: 124-263
Cow position: chr11:67172632-67172490 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 125-230
Cow position: chr11:74839689-74839791 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 126-231
Cow position: chr11:18924825-18924936 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 127-230
Cow position: chr11:25721921-25721817 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 131-231
Cow position: chr11:3224038-3224142 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 13

Conread position: 131-248
Cow position: chr11:75874685-75874569 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 18

Conread position: 133-224
Cow position: chr11:25165436-25165527 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 134-262
Cow position: chr11:1625133-1625002 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 150-247
Cow position: chr11:48937823-48937924 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.