Cow genome map


           Conread name:
           rlnt35c_a20.y1
        

               Conread position:
               108-250
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               91, 10
               

               Conread position:
               109-230
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 11
               

               Conread position:
               110-231
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               110-232
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               110-249
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               110-250
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               110-250
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               110-251
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               110-251
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               110-257
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 49
               

               Conread position:
               111-262
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 106
               

               Conread position:
               112-244
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               113-253
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 119
               

               Conread position:
               114-257
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               117-226
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               117-230
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 28
               

               Conread position:
               117-231
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               117-254
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               117-261
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               117-262
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               87, 113
               

               Conread position:
               119-220
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               85, 40
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               119-226
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               119-228
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               119-229
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               119-229
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               119-234
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-238
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 110
               

               Conread position:
               119-240
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-241
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               119-242
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               119-243
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               119-244
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 12
               

               Conread position:
               119-245
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-245
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               119-247
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               119-247
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               119-247
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               119-256
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               119-257
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               119-259
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               119-260
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-260
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 120
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               120-226
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               120-229
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               120-244
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               120-248
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 107
               

               Conread position:
               120-251
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               120-262
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               120-262
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               120-263
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               120-263
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               121-225
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               122-230
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               122-230
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 22
               

               Conread position:
               124-250
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               124-258
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 116
               

               Conread position:
               124-263
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               125-230
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               126-231
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               127-230
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               131-231
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               131-248
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               133-224
               

               Cow position:
               
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-262
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               150-247
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 0
               
Show alignments to all cow chromosomes.