Cow genome map
| Conread name: | rlnt35c_a20.y1 |
| Conread position: | 94-249 |
| Cow position: | chr14:36309207-36309359 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 106-232 |
| Cow position: | chr14:24945529-24945658 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 106-248 |
| Cow position: | chr14:30024981-30024843 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 106-254 |
| Cow position: | chr14:33462173-33462022 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 109-230 |
| Cow position: | chr14:32784156-32784281 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 110-220 |
| Cow position: | chr14:9308026-9307914 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 110-220 |
| Cow position: | chr14:48427035-48426920 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 110-259 |
| Cow position: | chr14:50683072-50683221 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 110-261 |
| Cow position: | chr14:15492554-15492395 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 110-262 |
| Cow position: | chr14:19827511-19827664 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 121 |
| Conread position: | 112-250 |
| Cow position: | chr14:36559266-36559407 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 126 |
| Conread position: | 117-231 |
| Cow position: | chr14:41749805-41749919 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 117-233 |
| Cow position: | chr14:21224595-21224477 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 117-242 |
| Cow position: | chr14:20826445-20826316 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 117-263 |
| Cow position: | chr14:38747632-38747487 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 119-225 |
| Cow position: | chr14:20110770-20110879 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 119-226 |
| Cow position: | chr14:33791144-33791035 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 119-227 |
| Cow position: | chr14:11643297-11643405 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 119-230 |
| Cow position: | chr14:21357510-21357394 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 119-231 |
| Cow position: | chr14:8688567-8688678 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 119-241 |
| Cow position: | chr14:11604834-11604713 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 105 |
| Conread position: | 119-241 |
| Cow position: | chr14:18345776-18345898 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 119-245 |
| Cow position: | chr14:41156772-41156897 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 119-246 |
| Cow position: | chr14:4848300-4848174 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 119-247 |
| Cow position: | chr14:22988986-22988854 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 26 |
| Conread position: | 119-249 |
| Cow position: | chr14:20640677-20640809 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 76, 112 |
| Conread position: | 119-251 |
| Cow position: | chr14:29734412-29734542 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 119-253 |
| Cow position: | chr14:25225680-25225547 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 119-254 |
| Cow position: | chr14:9510497-9510359 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 119-254 |
| Cow position: | chr14:13042710-13042575 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 43 |
| Conread position: | 119-255 |
| Cow position: | chr14:11577022-11576884 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 108 |
| Conread position: | 120-240 |
| Cow position: | chr14:28987644-28987517 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 120-250 |
| Cow position: | chr14:21427275-21427400 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 120-258 |
| Cow position: | chr14:37151987-37152126 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 120-259 |
| Cow position: | chr14:23078841-23078982 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 115 |
| Conread position: | 121-248 |
| Cow position: | chr14:9030235-9030103 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 121-255 |
| Cow position: | chr14:40107163-40107298 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 121-258 |
| Cow position: | chr14:20667058-20667194 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 122-224 |
| Cow position: | chr14:10706825-10706722 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 9 |
| Conread position: | 124-254 |
| Cow position: | chr14:28304837-28304973 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 124-257 |
| Cow position: | chr14:16769918-16770057 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 125-243 |
| Cow position: | chr14:13845932-13845820 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 127-240 |
| Cow position: | chr14:19960164-19960278 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 137-256 |
| Cow position: | chr14:30050014-30050136 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 138-230 |
| Cow position: | chr14:2712078-2712168 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.