Cow genome map


           Conread name:
           rlnt35c_a20.y1
        

               Conread position:
               108-221
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               108-239
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               109-252
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               118, 13
               

               Conread position:
               110-225
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               110-238
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               110-246
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 125
               

               Conread position:
               110-247
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               110-263
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               111-250
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               112-235
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               112-253
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               114-231
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               114-244
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               114-254
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               116-250
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               117-229
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               117-230
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               117-244
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               117-252
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               108, 27
               

               Conread position:
               117-259
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               118-263
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               119-214
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               119-221
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               119-221
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               119-223
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               119-226
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               119-228
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               119-229
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               119-232
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               119-241
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               119-250
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               119-251
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               119-252
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               119-255
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 119
               

               Conread position:
               120-230
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               120-247
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               121-230
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               121-247
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               121-251
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               123-226
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               124-245
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               124-258
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               124-263
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               127-226
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 7
               

               Conread position:
               127-261
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               128-249
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 101
               

               Conread position:
               130-263
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               134-242
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 92
               
Show alignments to all cow chromosomes.