Cow genome map
| Conread name: | rlnt35c_a20.y1 |
| Conread position: | 103-224 |
| Cow position: | chr20:5703587-5703713 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 110-243 |
| Cow position: | chr20:15548763-15548633 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 110-254 |
| Cow position: | chr20:8245842-8245986 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 110-257 |
| Cow position: | chr20:24069930-24070075 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 111-235 |
| Cow position: | chr20:13805445-13805568 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 117-211 |
| Cow position: | chr20:12033491-12033398 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 117-225 |
| Cow position: | chr20:4891988-4891876 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 117-226 |
| Cow position: | chr20:6765102-6765214 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 117-254 |
| Cow position: | chr20:7659098-7658954 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 119-219 |
| Cow position: | chr20:1999518-1999620 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 119-220 |
| Cow position: | chr20:2069999-2069894 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 119-221 |
| Cow position: | chr20:3148817-3148919 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 119-224 |
| Cow position: | chr20:23506068-23506177 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 119-226 |
| Cow position: | chr20:10208941-10209050 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 119-230 |
| Cow position: | chr20:11368229-11368117 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 119-231 |
| Cow position: | chr20:12420486-12420372 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 107 |
| Conread position: | 119-231 |
| Cow position: | chr20:24491890-24491777 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 119-232 |
| Cow position: | chr20:12581821-12581707 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 119-243 |
| Cow position: | chr20:34881264-34881142 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 119-245 |
| Cow position: | chr20:27407760-27407632 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 119-256 |
| Cow position: | chr20:18379511-18379650 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 119-261 |
| Cow position: | chr20:24522480-24522622 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 120-240 |
| Cow position: | chr20:14755706-14755586 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 120-241 |
| Cow position: | chr20:36741597-36741721 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 120-248 |
| Cow position: | chr20:14490380-14490504 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 120-248 |
| Cow position: | chr20:18500661-18500796 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 121-230 |
| Cow position: | chr20:17515499-17515394 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 121-255 |
| Cow position: | chr20:14283055-14283196 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 122-229 |
| Cow position: | chr20:3599262-3599156 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 123-226 |
| Cow position: | chr20:8442317-8442212 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 124-225 |
| Cow position: | chr20:19201670-19201776 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 124-248 |
| Cow position: | chr20:3141712-3141840 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 124-263 |
| Cow position: | chr20:17840884-17841024 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 125-242 |
| Cow position: | chr20:4931219-4931338 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 125-244 |
| Cow position: | chr20:23846525-23846408 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 125-253 |
| Cow position: | chr20:17755273-17755147 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 10 |
| Conread position: | 125-253 |
| Cow position: | chr20:23384432-23384563 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 125-257 |
| Cow position: | chr20:6473872-6474009 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 127-231 |
| Cow position: | chr20:22012532-22012637 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 127-248 |
| Cow position: | chr20:25021570-25021697 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 127-257 |
| Cow position: | chr20:2827919-2828046 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 7 |
| Conread position: | 131-250 |
| Cow position: | chr20:13123155-13123034 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 138-244 |
| Cow position: | chr20:26996685-26996794 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 155-249 |
| Cow position: | chr20:1009261-1009166 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 81 |
Show alignments to all cow chromosomes.