Cow genome map

Conread name: rlnt35c_a20.y1

Conread position: 109-245
Cow position: chr21:39393895-39394030 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 9

Conread position: 110-221
Cow position: chr21:16120016-16119903 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 110-224
Cow position: chr21:8506401-8506285 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 34

Conread position: 110-224
Cow position: chr21:8509289-8509173 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 34

Conread position: 110-252
Cow position: chr21:11182698-11182837 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 27

Conread position: 112-230
Cow position: chr21:27677626-27677751 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 112-252
Cow position: chr21:27521194-27521052 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 33

Conread position: 112-263
Cow position: chr21:40821749-40821594 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 113-226
Cow position: chr21:41668777-41668892 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 31

Conread position: 115-239
Cow position: chr21:23783692-23783571 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 32

Conread position: 117-225
Cow position: chr21:71738-71849 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 117-226
Cow position: chr21:21615934-21616040 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 117-233
Cow position: chr21:643476-643593 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 27

Conread position: 117-242
Cow position: chr21:41590413-41590287 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 30

Conread position: 117-243
Cow position: chr21:7460759-7460886 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 32

Conread position: 117-251
Cow position: chr21:5789513-5789645 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 11

Conread position: 117-262
Cow position: chr21:47719150-47719007 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 14

Conread position: 119-222
Cow position: chr21:24875507-24875612 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 28

Conread position: 119-225
Cow position: chr21:2904151-2904040 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 119-226
Cow position: chr21:17252825-17252713 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 119-229
Cow position: chr21:20260144-20260030 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 119-230
Cow position: chr21:16797005-16797120 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 119-230
Cow position: chr21:25012235-25012346 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 25

Conread position: 119-230
Cow position: chr21:37479439-37479322 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 25

Conread position: 119-230
Cow position: chr21:44732890-44732774 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 119-238
Cow position: chr21:11761717-11761838 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 16

Conread position: 119-250
Cow position: chr21:35337769-35337637 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 36

Conread position: 119-250
Cow position: chr21:37299616-37299747 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 59

Conread position: 119-252
Cow position: chr21:742431-742561 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 23

Conread position: 119-252
Cow position: chr21:42341784-42341648 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 17

Conread position: 119-255
Cow position: chr21:15012593-15012723 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 119-262
Cow position: chr21:45835235-45835091 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 25

Conread position: 120-261
Cow position: chr21:4281725-4281583 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 24

Conread position: 121-226
Cow position: chr21:37480121-37480228 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 72, 23

Conread position: 121-232
Cow position: chr21:45376104-45376217 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 23

Conread position: 121-241
Cow position: chr21:11644810-11644688 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 104

Conread position: 121-243
Cow position: chr21:12354547-12354421 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 121-263
Cow position: chr21:24131504-24131644 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 23

Conread position: 122-263
Cow position: chr21:18449909-18450055 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 22

Conread position: 124-223
Cow position: chr21:8349488-8349583 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 124-249
Cow position: chr21:38918358-38918488 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 12

Conread position: 124-259
Cow position: chr21:1464502-1464638 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 112

Conread position: 124-262
Cow position: chr21:12348924-12349067 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 110

Conread position: 125-238
Cow position: chr21:16498676-16498791 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 74, 19

Conread position: 127-229
Cow position: chr21:6851329-6851432 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 68, 19

Conread position: 127-254
Cow position: chr21:40820690-40820560 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 20, 105

Conread position: 133-245
Cow position: chr21:14326980-14327093 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 97

Conread position: 137-248
Cow position: chr21:10171576-10171472 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 141-221
Cow position: chr21:29213979-29213900 (view UCSC Genome Browser custom track)
Alignm length: 81
Alignm identity: 77
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 141-239
Cow position: chr21:13883658-13883756 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 54

Conread position: 150-254
Cow position: chr21:15268946-15268842 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.