Cow genome map
| Conread name: | rlnt35c_a20.y1 |
| Conread position: | 110-241 |
| Cow position: | chr23:40081584-40081716 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 110-246 |
| Cow position: | chr23:308531-308395 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 113-228 |
| Cow position: | chr23:40275461-40275352 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 114-245 |
| Cow position: | chr23:24809349-24809215 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 116-245 |
| Cow position: | chr23:3214591-3214459 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 28 |
| Conread position: | 117-226 |
| Cow position: | chr23:19565540-19565649 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 117-231 |
| Cow position: | chr23:18204497-18204611 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 117-231 |
| Cow position: | chr23:23104397-23104283 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 117-254 |
| Cow position: | chr23:23103235-23103095 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 118-224 |
| Cow position: | chr23:16664310-16664202 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 118-249 |
| Cow position: | chr23:2395506-2395372 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 119-223 |
| Cow position: | chr23:5795570-5795676 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 119-225 |
| Cow position: | chr23:6179453-6179346 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 119-228 |
| Cow position: | chr23:22238729-22238615 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 119-229 |
| Cow position: | chr23:2282089-2281982 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 119-230 |
| Cow position: | chr23:20725595-20725484 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 119-237 |
| Cow position: | chr23:399438-399325 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 119-237 |
| Cow position: | chr23:24718709-24718591 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 119-244 |
| Cow position: | chr23:534320-534445 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 119-248 |
| Cow position: | chr23:7155607-7155477 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 119-250 |
| Cow position: | chr23:24689379-24689514 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 119-253 |
| Cow position: | chr23:23033440-23033312 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 119-253 |
| Cow position: | chr23:26986179-26986042 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 119-254 |
| Cow position: | chr23:24966370-24966229 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 119-254 |
| Cow position: | chr23:27849089-27849222 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 119-258 |
| Cow position: | chr23:40995263-40995397 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 25 |
| Conread position: | 120-246 |
| Cow position: | chr23:35239444-35239574 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 120-247 |
| Cow position: | chr23:12363524-12363396 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 120-249 |
| Cow position: | chr23:5603652-5603524 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 120-260 |
| Cow position: | chr23:307549-307695 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 121-230 |
| Cow position: | chr23:17597521-17597629 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 23 |
| Conread position: | 122-262 |
| Cow position: | chr23:2501758-2501620 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 124-243 |
| Cow position: | chr23:40778361-40778481 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 124-248 |
| Cow position: | chr23:8698519-8698649 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 124-259 |
| Cow position: | chr23:15099831-15099690 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 124-263 |
| Cow position: | chr23:5453559-5453702 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 126-261 |
| Cow position: | chr23:39778501-39778637 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 126-262 |
| Cow position: | chr23:24483509-24483375 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 127-240 |
| Cow position: | chr23:5449821-5449937 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 128-263 |
| Cow position: | chr23:5608951-5608813 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 132-254 |
| Cow position: | chr23:5732646-5732769 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 133-243 |
| Cow position: | chr23:18354783-18354894 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 135-247 |
| Cow position: | chr23:9131854-9131740 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 45 |
| Conread position: | 136-261 |
| Cow position: | chr23:1743901-1744022 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 139-241 |
| Cow position: | chr23:19872583-19872483 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 140-227 |
| Cow position: | chr23:1697997-1698084 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-261 |
| Cow position: | chr23:8063644-8063766 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 22 |
Show alignments to all cow chromosomes.