Cow genome map
| Conread name: | rlnt35c_a20.y1 |
| Conread position: | 64-257 |
| Cow position: | chr24:11734695-11734889 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 134, 80 |
| Conread position: | 110-225 |
| Cow position: | chr24:30235927-30236047 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 110-248 |
| Cow position: | chr24:43028273-43028128 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 110-253 |
| Cow position: | chr24:13948177-13948323 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 110-258 |
| Cow position: | chr24:230340-230488 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 112-226 |
| Cow position: | chr24:2992823-2992704 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 112-243 |
| Cow position: | chr24:10499273-10499411 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 133 |
| Conread position: | 117-230 |
| Cow position: | chr24:18356988-18356877 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 117-248 |
| Cow position: | chr24:17104506-17104375 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 117-251 |
| Cow position: | chr24:7275766-7275899 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 117-262 |
| Cow position: | chr24:37823591-37823738 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 117-263 |
| Cow position: | chr24:30313963-30313814 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 119-227 |
| Cow position: | chr24:27413047-27412938 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 119-228 |
| Cow position: | chr24:42792419-42792530 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 119-241 |
| Cow position: | chr24:41925888-41926004 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 119-250 |
| Cow position: | chr24:2380018-2380152 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 115 |
| Conread position: | 119-251 |
| Cow position: | chr24:3165884-3166021 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 119-252 |
| Cow position: | chr24:42146273-42146408 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 54 |
| Conread position: | 119-253 |
| Cow position: | chr24:5142008-5142141 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 119-257 |
| Cow position: | chr24:22129572-22129438 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 119-261 |
| Cow position: | chr24:21656474-21656621 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 120 |
| Conread position: | 119-261 |
| Cow position: | chr24:29539864-29539719 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 120-251 |
| Cow position: | chr24:39523382-39523251 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 120-253 |
| Cow position: | chr24:43499727-43499860 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 120-256 |
| Cow position: | chr24:27149450-27149591 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 121-262 |
| Cow position: | chr24:28566266-28566128 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 122-247 |
| Cow position: | chr24:28700119-28700237 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 124-256 |
| Cow position: | chr24:885374-885242 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 111 |
| Conread position: | 124-261 |
| Cow position: | chr24:18754502-18754647 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 125-256 |
| Cow position: | chr24:6488280-6488407 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 127-245 |
| Cow position: | chr24:23637727-23637608 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 128-227 |
| Cow position: | chr24:15057457-15057561 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 129-225 |
| Cow position: | chr24:17311149-17311054 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 129-263 |
| Cow position: | chr24:40811749-40811881 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 131-257 |
| Cow position: | chr24:30087551-30087678 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 133-263 |
| Cow position: | chr24:39841455-39841318 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 134-250 |
| Cow position: | chr24:37681476-37681591 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 139-262 |
| Cow position: | chr24:28467263-28467144 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 146-254 |
| Cow position: | chr24:28303269-28303159 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 53, 80 |
Show alignments to all cow chromosomes.