Cow genome map


           Conread name:
           rlnt35c_a20.y1
        

               Conread position:
               88-247
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               102-260
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               110-226
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               110-229
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               110-229
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               110-230
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               110-238
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               110-246
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 25
               

               Conread position:
               110-247
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               110-254
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               41, 123
               

               Conread position:
               110-254
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               112-249
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               112-251
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               114-245
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               113, 33
               

               Conread position:
               115-226
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               117-243
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               117-251
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               119-219
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               119-226
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-226
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-229
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               119-229
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               119-233
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               119-237
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               119-238
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 107
               

               Conread position:
               119-238
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               119-241
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               119-242
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               119-242
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               119-243
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               119-243
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               119-245
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               119-249
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               119-252
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               119-261
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 12
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               120-230
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               120-241
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               120-261
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               121-231
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               122-256
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               124-232
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               124-251
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               124-261
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               124-262
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               125-238
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               125-257
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               127-243
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               140-230
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               140-257
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               144-253
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               146-263
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               149-226
               

               Cow position:
               
               

               Alignm length:
               78
               

               Alignm identity:
               71
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.