Cow genome map
| Conread name: | rlnt35c_a20.y1 |
| Conread position: | 103-254 |
| Cow position: | chr29:22720573-22720421 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 110-225 |
| Cow position: | chr29:17110036-17110151 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 110-226 |
| Cow position: | chr29:36952233-36952113 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 110-238 |
| Cow position: | chr29:34919380-34919253 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 110-244 |
| Cow position: | chr29:22162182-22162049 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 111-261 |
| Cow position: | chr29:18878403-18878244 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 114-227 |
| Cow position: | chr29:19756525-19756637 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 117-208 |
| Cow position: | chr29:22723687-22723777 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 117-231 |
| Cow position: | chr29:33143268-33143150 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 117-243 |
| Cow position: | chr29:936293-936420 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 117-243 |
| Cow position: | chr29:29769265-29769135 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 77, 26 |
| Conread position: | 119-224 |
| Cow position: | chr29:28726915-28727021 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 119-226 |
| Cow position: | chr29:19363798-19363907 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 119-226 |
| Cow position: | chr29:20529026-20529136 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 119-226 |
| Cow position: | chr29:25981914-25981804 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 119-228 |
| Cow position: | chr29:36357214-36357328 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 119-229 |
| Cow position: | chr29:38010533-38010646 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 119-230 |
| Cow position: | chr29:7414590-7414696 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 119-230 |
| Cow position: | chr29:19762356-19762466 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 119-231 |
| Cow position: | chr29:32215796-32215907 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 119-237 |
| Cow position: | chr29:25737326-25737209 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 103, 47 |
| Conread position: | 119-240 |
| Cow position: | chr29:7443973-7443854 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 115, 15 |
| Conread position: | 119-240 |
| Cow position: | chr29:20167512-20167634 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 119-241 |
| Cow position: | chr29:9378725-9378848 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 119-246 |
| Cow position: | chr29:5063233-5063362 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 119-249 |
| Cow position: | chr29:659370-659503 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 119-250 |
| Cow position: | chr29:10839029-10839160 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 81, 25 |
| Conread position: | 119-250 |
| Cow position: | chr29:19949395-19949527 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 119-255 |
| Cow position: | chr29:7290864-7290994 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 119-256 |
| Cow position: | chr29:40112470-40112608 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 81, 24 |
| Conread position: | 119-259 |
| Cow position: | chr29:17282155-17282293 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 121-226 |
| Cow position: | chr29:19420523-19420421 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 121-230 |
| Cow position: | chr29:10058448-10058340 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 121-259 |
| Cow position: | chr29:1007910-1008053 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 124-231 |
| Cow position: | chr29:24604990-24605100 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 127-231 |
| Cow position: | chr29:7438963-7438857 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 72, 7 |
| Conread position: | 127-249 |
| Cow position: | chr29:22729664-22729786 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 129-254 |
| Cow position: | chr29:6813096-6812968 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 131-221 |
| Cow position: | chr29:570742-570650 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 62, 38 |
| Conread position: | 132-241 |
| Cow position: | chr29:36530968-36531081 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 147-260 |
| Cow position: | chr29:35070953-35070842 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 155-252 |
| Cow position: | chr29:25824080-25824176 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.